Triblock copolymer matrix‐based capillary electrophoretic microdevice for high‐resolution multiplex pathogen detection

Rapid and simple analysis for the multiple target pathogens is critical for patient management. CE‐SSCP analysis on a microchip provides high speed, high sensitivity, and a portable genetic analysis platform in molecular diagnostic fields. The capability of separating ssDNA molecules in a capillary electrophoretic microchannel with high resolution is a critical issue to perform the precise interpretation in the electropherogram. In this study, we explored the potential of poly(ethyleneoxide)‐poly(propyleneoxide)‐poly(ethyleneoxide) (PEO‐PPO‐PEO) triblock copolymer as a sieving matrix for CE‐SSCP analysis on a microdevice. To demonstrate the superior resolving power of PEO‐PPO‐PEO copolymers, 255‐bp PCR amplicons obtained from 16S ribosomal RNA genes of four bacterial species, namely Proteus mirabilis, Haemophilus ducreyi, Pseudomonas aeruginosa, and Neisseria meningitidis, were analyzed in the PEO‐PPO‐PEO matrix in comparison with 5% linear polyacrylamide and commercial GeneScan? gel. Due to enhanced dynamic coating and sieving ability, PEO‐PPO‐PEO copolymer displayed fourfold enhancement of resolving power in the CE‐SSCP to separate same‐sized DNA molecules. Fivefold input of genomic DNA of P. aeruginosa and/or N. meningitidis produced proportionally increased corresponding amplicon peaks, enabling correct quantitative analysis in the pathogen detection. Besides the high‐resolution sieving capability, a facile loading and replenishment of gel in the microchannel due to thermally reversible gelation property makes PEO‐PPO‐PEO triblock copolymer an excellent matrix in the CE‐SSCP analysis on the microdevice.     

Micellar ordered structure effects on high‐resolution CE‐SSCP using Pluronic triblock copolymer blends

Pluronic F108 block copolymers have shown a great promise to achieve the desirable high resolution in the conformation‐sensitive separation of ssDNA using CE‐SSCP. However, fundamental understanding of the structures and properties of Pluronic matrix affecting the resolution is still limited. Unlike conventional gel‐forming homopolymers, Pluronic F108 block copolymers are amphiphilic macromolecules consisting of poly(ethylene oxide)‐b‐poly(propylene oxide)‐b‐poly(ethylene oxide) triblock copolymers, which are capable of forming a highly ordered micellar structure in aqueous solution. In this study, we have performed a series of experiments by blending different types of Pluronic polymers to control the formation of micelles and to study the correlation between separation and rheological characteristics of Pluronic gels affecting the resolution of CE‐SSCP. Our experiments have been specifically designed to elucidate how the micellar structure affects the resolution of CE‐SSCP upon altering the size uniformity and constituent homogeneity of the micelles. Our results suggest that uniformly sized micelle packing is the primary structural feature of Pluronic gel matrix for the high‐resolution separation, while the size and constituent of the micelle themselves need to be considered as secondary factors.     

High‐resolution pluronic‐filled microchip CE‐SSCP analysis system via channel width control

Although the resolution of CE‐SSCP has been significantly improved by using a poly(ethyleneoxide)‐poly(propyleneoxide)‐poly(ethyleneoxide) (PEO‐PPO‐PEO; Pluronic^®) triblock copolymer as a separation medium, CE‐SSCP on a microchip format is not widely applicable because their resolution is limited by short channel length. Therefore, a strategy to improve the resolution in channels of limited lengths is highly required for enabling microchip‐based CE‐SSCP. In this study, we developed a high‐resolution CE‐SSCP microchip system by controlling the width of the pluronic‐filled channel. We tested four different channel widths of 180, 240, 300, and 400 μm, and found that 300 μm showed the highest resolution in the separation of two pathogen specific markers. Potential applications of our method in various genetic analyses were also shown by using SNP markers for spinal muscular atrophy.     

A new single‐step quantitative pathogen detection system: Template‐tagging followed by multiplex asymmetric PCR using common primers and CE‐SSCP

Rapid diagnosis of bacterial infection is important for patient management and appropriate therapy during the early phase of bacteria‐induced disease. Among the existing techniques for identifying microbial, CE‐SSCP combined with 16S ribosomal RNA gene‐specific PCR has the benefits of excellent sensitivity, resolution, and reproducibility. However, even though CE‐SSCP can separate PCR products with high‐resolution, multiplex detection and quantification are complicated by primer‐dimer formation and non‐specific amplification. Here, we describe a novel technique for multiplex detection and quantification of pathogens by template‐tagging followed by multiplex asymmetric PCR and subsequent CE‐SSCP. More specifically, we reverse transcribed 16S ribosomal RNAs from seven septicemia‐inducing pathogens, tagged the templates with common end sequences, and amplified them using common primers. The resulting amplicons could be successfully separated by CE‐SSCP and quantified by comparison to an internal standard. This method yielded results that illustrate the potential of this system for diagnosing infectious disease.     

A multiplex single nucleotide polymorphism genotyping method using ligase‐based mismatch discrimination and CE‐SSCP

Accuracy, simplicity, and cost‐effectiveness are the most important criteria for a genotyping method for SNPs compatible with clinical use. One method developed for SNP genotyping, ligase‐based discrimination, is considered the simplest for clinical diagnosis. However, multiplex assays using this method are limited by the detection method. Although CE has been introduced as an alternative to error prone microarray‐based detection, the design process and multiplex assay procedure are complicated because of the DNA size‐dependent separation principle. In this study, we developed a simple and accurate multiplex genotyping method using reaction condition‐optimized ligation and high‐resolution CE‐based SSCP. With this high‐resolution CE‐SSCP system, we are able to use similar‐sized probes, thereby eliminating the complex probe design step and simplifying the optimization process. We found that this method could accurately discriminate single‐base mismatches in SNPs of the tp53 gene, used as targets for multiplex detection.     

Highly multiplex and sensitive SNP genotyping method using a three‐color fluorescence‐labeled ligase detection reaction coupled with conformation‐sensitive CE

For the development of clinically useful genotyping methods for SNPs, accuracy, simplicity, sensitivity, and cost‐effectiveness are the most important criteria. Among the methods currently being developed for SNP genotyping technology, the ligation‐dependent method is considered the simplest for clinical diagnosis. However, sensitivity is not guaranteed by the ligation reaction alone, and analysis of multiple targets is limited by the detection method. Although CE is an attractive alternative to error‐prone hybridization‐based detection, the multiplex assay process is complicated because of the size‐based DNA separation principle. In this study, we employed the ligase detection reaction coupled with high‐resolution CE‐SSCP to develop an accurate, sensitive, and simple multiplex genotyping method. Ligase detection reaction could amplify ligated products through recurrence of denaturation and ligation reaction, and SSCP could separate these products according to each different structure conformation without size variation. Thus, simple and sensitive SNP analysis can be performed using this method involving the use of similar‐sized probes, without complex probe design steps. We found that this method could not only accurately discriminate base mismatches but also quantitatively detect 37 SNPs of the tp53 gene, which are used as targets in multiplex analysis, using three‐color fluorescence‐labeled probes.     

Microphase‐separated structure of 1,3‐cyclohexadiene/butadiene triblock copolymers and its effect on mechanical and thermal properties

We report the effect of microphase‐separated structure on the mechanical and thermal properties of several poly(1,3‐cyclohexadiene‐block‐butadiene‐block‐1,3‐cyclohexadiene) triblock copolymers (PCHD‐block‐PBd‐block‐PCHD) and of their hydrogenated derivatives: poly(cyclohexene‐block‐ethylene/butylene‐block‐cyclohexene) triblock copolymers (PCHE‐block‐PEB‐block‐PCHE). Both mechanical strength and heat‐resistant temperature (ex. Vicat Softening Temperature: VSPT) tended to increase with an increase in the 1,3‐cyclohexadiene (CHD)/butadiene ratio. On the other hand, heat resistance of the hydrogenated block copolymer was found to be higher than that of the unhydrogenated block copolymer. However, the mechanical strength was lower than those of the unhydrogenated block copolymer with the same ratio of CHD to butadiene. To clarify the relationship between the higher order structures of those block copolymers and their properties, we observed the microphase‐separated structure by transmission electron microscope (TEM). Hydrogenated block copolymers were found to have more finely dispersed microphase‐separated structures than those of the unhydrogenated block copolymers with the same CHD/Bd ratios through the use of TEM and the small‐angle X‐ray scattering (SAXS) technique. Those results indicated that the segregation strength between the PCHE block sequence and the PEB block sequence increased, depending on hydrogenation of the unhydrogenated precursor. © 2000 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 39: 13–22, 2001     

Effect of binary block‐selective solvents on self‐assembly of ABA triblock copolymer in dilute solution

We have studied the self‐assembly of the ABA triblock copolymer (P4VP‐b‐PS‐b‐P4VP) in dilute solution by using binary block‐selective solvents, that is, water and methanol. The triblock copolymer was first dissolved in dioxane to form a homogeneous solution. Subsequently, a given volume of selective solvent was added slowly to the solution to induce self‐assembly of the copolymer. It was found that the copolymer (P4VP₄₃‐b‐PS₃₆₆‐b‐P4VP₄₃) tended to form spherical aggregate or bilayer structure when we used methanol or water as the single selective solvent, respectively. However, the aggregates with various nanostructures were obtained by using mixtures of water and methanol as the block‐selective solvents. The aggregate structure changed from sphere to rod, vesicle, and then to bilayer by changing water content in the block‐selective solvent from 0 to 100%. Moreover, it was found that the vesicle size could be well controlled by changing the copolymer content in the solution. © 2008 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 46: 1536–1545, 2008     

Synthesis,pH‐ and temperature‐induced micellization and gelation of doubly hydrophilic triblock copolymer of poly(N,N‐dimethylamino‐2‐ethylmethacrylate)‐b‐poly(ethylene glycol)‐b‐poly(N,N‐dimethylamino‐2‐ethylmethacrylate) in aqueous solutions

A doubly hydrophilic triblock copolymer of poly(N,N‐dimethylamino‐2‐ethyl methacrylate)‐b‐Poly(ethylene glycol)‐b‐poly(N,N‐dimethylamino‐2‐ethylmethacrylate) (PDMAEMA‐b‐PEG‐b‐PDMAEMA) with well‐defined structure and narrow molecular weight distribution (M_w/M_n = 1.21) was synthesized in aqueous medium via atom transfer radical polymerization (ATRP) of N,N‐dimethylamino‐2‐ethylmethacrylate (DMAEMA) initiated by the PEG macroinitiator. The macroinitiator and triblock copolymer were characterized with ¹H NMR and gel permeation chromatography (GPC). Fluorescence spectroscopy, dynamic light scattering (DSL), transmittance measurement, and rheological characterization were applied to investigate pH‐ and temperature‐induced micellization in the dilute solution of 1 mg/mL when pH > 13 and gelation in the concentrated solution of 25 wt % at pH = 14 and temperatures beyond 80 °C. The unimer of R_h = 3.7 ± 0.8 nm coexisted with micelle of R_h = 45.6 ± 6.5 nm at pH 14. Phase separation occurred in dilute aqueous solution of the triblock copolymer of 1 mg/mL at about 50 °C. Large aggregates with R_h = 300–450 nm were formed after phase separation, which became even larger as R_h = 750–1000 nm with increasing temperature. The gelation temperature determined by rheology measurement was about 80 °C at pH 14 for the 25 wt % aqueous solution of the triblock copolymer. © 2008 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 5869–5878, 2008     

RAFT synthesis of a water‐soluble triblock copolymer of poly(styrenesulfonate)‐b‐poly(ethylene glycol)‐b‐poly(styrenesulfonate) using a macromolecular chain transfer agent in aqueous solution

Triblock copolymers of poly(styrenesulfonate)‐b‐poly(ethylene glycol)‐b‐poly(styrenesulfonate) with narrow molecular weight distribution (M_w/M_n = 1.28–1.40) and well‐defined structure have been synthesized in aqueous solution at 70 °C via reversible addition‐fragmentation chain transfer polymerization. Poly(ethylene glycol) (PEG) capped with 4‐cyanopentanoic acid dithiobenzoate end groups was used as the macro chain transfer agent (PEG macro‐CTA) for sole monomer sodium 4‐styrenesulfonate. The reaction was controllable and displayed living polymerization characteristics and the triblock copolymer had designed molecular weight. The reaction rate depended strongly on the CTA and initiator concentration ratio [CTA]₀/[ACPA]₀: an increase in [CTA]₀/[ACPA]₀ from 1.0 to 5.0 slowed down the polymerization rate and improved the molecular weight distribution with a prolonged induction time. The polymerization proceeded, following first‐order kinetics when [CTA]₀/[ACPA]₀ = 2.5 and 5.0. © 2007 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 45: 3698–3706, 2007     

Construction of temperature responsive hybrid crosslinked self‐assemblies based on PEG‐b‐P(MMA‐co‐MPMA)‐b‐PNIPAAm triblock copolymer: ATRP synthesis and thermoinduced association behavior

A novel amphiphilic thermosensitive poly(ethylene glycol)₄₅‐b‐poly(methyl methacrylate₄₆‐co‐3‐(trimethoxysilyl)propyl methacrylate)₂‐b‐poly(N‐isopropylacrylamide)₄₂₉ (PEG₄₅‐b‐P(MMA₄₆‐co‐MPMA₂)‐b‐PNIPAAm₄₂₉) triblock copolymer was synthesized via consecutive atom transfer radical polymerization techniques. The thermoinduced association behavior of the resulting triblock copolymers in aqueous medium was further investigated in detail by ¹H NMR, transmission electron microscopy, and dynamic light scattering. The results showed that at the temperature (25 °C) below the LCST, PEG₄₅‐b‐P(MMA₄₆‐co‐MPMA₂)‐b‐PNIPAAm₄₂₉ triblock copolymers self‐assembled into the core crosslinked micelles with the hydrophobic P(MMA‐co‐MPMA) block constructing a dense core, protected by the mixed soluble PEG and PNIPAAm chains acting as a hydrophilic shell simultaneously. With an increase in temperature, the resulting core‐shell micelles converted into a new type of micelles with the hydrophilic PEG chains stretching out from the hydrophobic core through the collapsed PNIPAAm shell. On the other hand, at the temperature (40 °C) above the LCST, such triblock copolymers formed the crosslinked vesicles with the hydrophobic PNIPAAm and P(MMA‐co‐MPMA) blocks constructing a membrane core and the soluble PEG chains building the hydrophilic lumen and the shell. On further decreasing the temperature, the resulting vesicles underwent transformation from the shrunken to the expanded status, leading to the formation of swollen vesicles with enlarged size. This study is believed to present the first formation of two types of hybrid crosslinked self‐assemblies by thermoinduced regulation. © 2011 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2011     

Synthesis,surface properties,and morphologies of poly[methyl(3,3,3‐trifluoropropyl)siloxane]‐b‐polystyrene‐b‐poly(tert‐butyl acrylate) triblock copolymers by a combination of anionic ROP and ATRP

A series of well‐defined poly[methyl(3,3,3‐trifluoropropyl)siloxane]‐b‐polystyrene‐b‐poly(tert‐butyl acrylate) (PMTFPS‐b‐PS‐b‐PtBA) triblock copolymers were prepared by a combination of anionic ring‐opening polymerization of 1,3,5‐trimethyl‐1,3,5‐tris(3′,3′,3′‐trifluoropropyl)cyclotrisiloxane (F₃), and atom transfer radical polymerization (ATRP) of styrene (St) and tert‐butyl acrylate (tBA), using the obtained α‐bromoisobutyryl‐terminal PMTFPS (PMTFPS‐Br) as the macroinitiators. The ATRP of St from PMTFPS‐Br, as well as the ATRP of tBA from the obtained PMTFPS‐b‐PS‐Br macroinitiators, has typical characteristic of controlled/living polymerization. The results of contact angle measurements for the films of PMTFPS‐b‐PS‐b‐PtBA triblock copolymers demonstrate that the compositions have an effect on the wetting behavior of the copolymer films. For the copolymer films with different compositions, there may be different macroscale or nanoscale structures on the outmost layer of the copolymer surfaces. The films with high content of PtBA blocks exhibit almost no ordered microstructures on the outmost layer of the copolymer surfaces, even though they have microphase‐separated structures in bulk. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012     

Hydrophobically controlled self‐association of pH‐ and thermo‐sensitive triblock copolymers based on poly(acrylic acid‐co‐tert‐butyl acrylate) and poly(propylene oxide)

Aqueous solution properties of amphiphilic P(AA‐co‐tBA)‐b‐PPO‐b‐ P(AA‐co‐tBA) copolymers having various tBA contents are presented in this article. These copolymers show pH‐sensitive behavior depending on tBA/AA ratio. Hydrophobic interactions between tBA units leading to pH‐dependent macroscopic aggregates were evidenced by turbidimetry. The aggregation behavior of the PPO middle block was concealed in presence of tBA units. The formation of water‐soluble aggregated objects was characterized by Asymmetrical Flow Field Flow Fractionation (AsF4). By increasing tBA/AA ratio, we observed an increase of aggregates size as well as a reduction of the critical concentration aggregation. © 2016 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2016 , 54, 1944–1949     

Application of a capillary‐assembled microfluidic system for separation of cephalosporins

This paper demonstrates a simple and easy setting up of a fused‐silica capillary‐assembled microfluidic system (μCE). This system incorporates a split‐flow pressure injection of the sample into a microfluidic system made from PDMS and a short (～20 cm) length of fused‐silica capillary as a separation unit. The on‐capillary detection was carried out by fiber optic spectrometry. A mixture of six cephalosporin antibiotics was separated in the μCE system and the obtained results were compared to those achievable by conventional CE. The six components could be separated within 8.5 min with the number of theoretical plates around 10 000.     

Two‐step signal amplification for high‐sensitivity detection of biomarkers using gold nanoparticle–based conjugates

The measurement of biomarkers in bodily fluids is extremely important for diagnosing disease, monitoring disease progression, and evaluating treatment efficacy. In this paper, we present a highly sensitive and compatible gold nanoparticle (AuNP)‐based, two‐step signal amplification system for biomarker detection. First, AuNPs were coated onto the surfaces of 96‐well plates to generate rough surfaces, which enable immobilization of many more capture antibodies than a smooth substrate. As a result, detection sensitivity was enhanced significantly. Second, the horseradish peroxidase (HRP)‐conjugated detection antibodies were labeled on large‐size AuNPs, which increase the localized amounts of HRP and thus further lower the detection limit. Based on the consecutive signal amplification system, a high‐sensitivity assay was achieved, with a LOD of 0.07 ng/mL for prostate‐specific antigen (PSA). This assay was allowed to detect the PSA levels in clinical samples without changing the current standard immunoassay setups, showing great potential in many settings where immunoassays are needed.     

Effect of PEO‐PPO‐PEO copolymer on the mechanical and thermal properties and morphological behavior of biodegradable poly (L‐lactic acid) (PLLA) and poly (butylene succinate‐co‐L‐lactate) (PBSL) blends

A blend of two biodegradable and semi‐crystalline polymers, poly (L‐lactic acid) (PLLA; 70 wt%) and poly (butylene succinate‐co‐L‐lactate) (PBSL; 30 wt%), was prepared in the presence of various polyethylene oxide‐polypropylene oxide‐polyethylene oxide (PEO‐PPO‐PEO) triblock copolymer contents (0.5, 1, 2 wt%). Mechanical, thermal properties, and Fourier transform infrared (FTIR) analysis of the blends were investigated. It was found that the addition of copolymer to PLLA/PBSL improved the fracture toughness of the blends as shown by mode I fracture energies. It was supported by morphological analysis where the brittle deformation behavior of PLLA changed to ductile deformation with the presence of elongated fibril structure in the blend with copolymer system. The glass transition temperature (T_g), melting temperature (T_m) of PLLA, and PBSL shift‐closed together indicated that some compatibility exists in the blends. In short, PEO‐PPO‐PEO could be used as compatibilizer to improve the toughness and compatibility of the PLLA/PBSL blends. Copyright © 2010 John Wiley & Sons, Ltd.     

A high‐sensitivity LIF detector with silver mirror coating detection window and small‐angle optical deflection from collinear system for CE

An LIF detector was integrated into a CE system based on silver mirror coating detection window and small‐angle optical deflection from collinear configuration. For this detection scheme, the incident light beam was focused on capillary through the edge of a lens, resulting in a small deflection angle that deviated 18° from the collinear configuration. Meanwhile, the excitation light and emitted fluorescence were effectively reflected by silver mirror coating at the detection window. The fluorescence was collected through the center of the same lens and delivered to a PMT in the vertical direction. In contrast to conventional collinear LIF detection systems, the fluorescence intensity was greatly enhanced and the background level was significantly eliminated. FITC and FITC‐labeled amino acids were used as model analytes to evaluate the performance with respect to design factors of this system. The limit LOD was estimated to be 0.5 pM for FITC (S/N = 3), which is comparable to that of optimized confocal LIF systems. All the results indicate that the proposed detection scheme will be promising for development of sensitive and low‐cost CE system.     

Synthesis and characterization of biodegradable triblock copolymers based on bacterial poly[(R)‐3‐hydroxybutyrate] by atom transfer radical polymerization

Biodegradable poly(tert‐butyl acrylate)–poly[(R)‐3‐hydroxybutyrate]–poly (tert‐butyl acrylate) triblock copolymers based on bacterial poly[(R)‐3‐hydroxybutyrate] (PHB) were synthesized by atom transfer radical polymerization. The chain architectures of the triblock copolymers were confirmed by ¹H NMR and ¹³C NMR spectra. Gel permeation chromatography analysis was used to estimate the molecular weight characteristics and lengths of the PHB and poly(tert‐butyl acrylate) blocks of the copolymers. The thermal properties of the copolymers were studied by thermogravimetric analysis (TGA) and differential scanning calorimetry (DSC). TGA showed that the triblock copolymers underwent stepwise thermal degradation and had better thermal stability than their respective homopolymers, whereas DSC analyses showed that a microphase‐separation structure was formed only in the triblock copolymers with the longer PHB block. As a similar result, from wide‐angle X‐ray diffraction experimentation, the crystalline phase of PHB could not be seen evidently in the triblock copolymers with the shorter PHB block. The enzymatic hydrolysis of the copolymer films was carried at 37 °C and pH 7.4 in a potassium phosphate buffer with an extracellular PHB depolymerase from Penicillum sp. The biodegradability of the triblock copolymers increased with an increase in the PHB block content. © 2005 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 43: 4857–4869, 2005     

The effect of electron beam irradiation on dynamic shear rheological behavior of a poly (propylene‐co‐ethylene) heterophasic copolymer

In this study the effect of electron beam irradiation on rheological properties of a poly (propylene‐co‐ethylene) heterophasic copolymer is evaluated. Using dynamic viscoelastic measurement in the linear viscoelastic range of deformation, it is observed that the complex viscosity and dynamic modulus of polypropylenes were decreased by increasing the irradiation dose. Polypropylene heterophasic copolymers consist of ethylene propylene rubber phase dispersed in polypropylene homopolymer matrix. The high energy electron beams simultaneously affect both isotactic polypropylene (iPP) matrix and ethylene propylene dispersed phase. The molecular chains of polypropylene homopolymer phase breakdown to smaller species, those are prone to degradation and branching as well. Increase in the melt flow rate behavior and shifting the cross‐over point to higher frequencies and increase in melt strength are due to this phenomenon. At the same time, the ethylene propylene phase of the polypropylene copolymer cross‐links due to irradiation, and a significant effect on the rheological behavior of samples are observed. The mathematical modeling of complex viscosity behavior revealed the conformity of experimental data with modified Carreau equation. Copyright © 2010 John Wiley & Sons, Ltd.