Mechanism and Stereoselectivity of the Elementometalation Process of Activated Alkyne RCCR(RCO2Me) by Cp2TaH3

The elementometalation process is a fundamental chemical step in several catalytic cycles. In this work, density functional theory computations have elucidated the detailed elementometalation mechanism of activated alkyne RCCR(RCO₂Me) by Cp₂TaH₃ and rationalized the selectivity in experimental findings. The calculated results show that in the formation process of (E)-olefin monohydride((E)-Pro), the Gibbs free energy barrier is low and the entire reaction is spontaneous and exothermic; thus, (E)-Pro can be formed easily. The formation of (Z)-η²-olefin monohydride complex ((Z)-Pro) is difficult due to its high Gibbs free energy barrier. The formation process (E)-Pro consists of the following five steps: hydride H1-shift, conformational isomerism 1, hydride H2-shift, conformational isomerism 2, and olefin coordination process. Topological analysis shows that there is a five-membered ring plane structure in the reaction pathway and that the final product (E)-Pro belongs to a typical η²-olefin monohydride complex. Our calculated results provide an explanation for experimental observations and useful insights for further development of olefin functionalization. © 2019 Wiley Periodicals, Inc.     

Synthesis of the peptide moiety of the jamaicamides

The jamaicamides, isolated from cyanobacterium Lyngbya majuscula in Jamaica, are unique mixed polyketide-peptides that are reported to be blockers of the sodium channels. The peptide moiety contains a pyrrolinone ring and a β-methoxy enone functionality. Herein, we report the stereoselective synthesis of the N-(Boc)₂-protected peptide moiety of the jamaicamides by utilizing Meldrum’s acid starting from l-alanine and N-Boc-β-alanine.     

Direct Stereoconvergent Allylation of Chiral Alkylcopper Nucleophiles with Racemic Allylic Phosphates

Copper-catalyzed stereoconvergent allylation of chiral sp³-hybridized carbon nucleophiles with a racemic mixture of acyclic secondary allylic phosphates is reported. In the presence of a copper-catalyst complexed with chiral BenzP* ligand, tandem coupling reaction of vinyl arenes, bis(pinacolato)diboron, and racemic allylic phosphates provided β-chiral alkylboronates possessing (E)-alkenyl moiety through a direct stereoconvergent allylic coupling with concomitant generation of a C(sp³)-stereogenic center. A range of vinyl (hetero)arenes and secondary allylic phosphates bearing 1°, 2°, 3° alkyl and phenyl α-substituents were suitable for the reaction, forming products with high enantioselectivities up to 95 % ee. Density functional theory calculations were conducted in detail to elucidate the origin of the observed regioselectivity of borylcupration and stereoconvergent (E)-olefin formation from racemic allylic phosphates.     

Insect-Associated Bacteria Assemble the Antifungal Butenolide Gladiofungin by Non-Canonical Polyketide Chain Termination

Genome mining of one of the protective symbionts (Burkholderia gladioli) of the invasive beetle Lagria villosa revealed a cryptic gene cluster that codes for the biosynthesis of a novel antifungal polyketide with a glutarimide pharmacophore. Targeted gene inactivation, metabolic profiling, and bioassays led to the discovery of the gladiofungins as previously-overlooked components of the antimicrobial armory of the beetle symbiont, which are highly active against the entomopathogenic fungus Purpureocillium lilacinum. By mutational analyses, isotope labeling, and computational analyses of the modular polyketide synthase, we found that the rare butenolide moiety of gladiofungins derives from an unprecedented polyketide chain termination reaction involving a glycerol-derived C3 building block. The key role of an A-factor synthase (AfsA)-like offloading domain was corroborated by CRISPR-Cas-mediated gene editing, which facilitated precise excision within a PKS domain.     

Dendryphiellin A,the First Fungal Trinor-eremophilane. Isolation from the marine deuteromycete Dendryphiella salina (SUTHERLAND) PUGHet NICOT

The novel metabolite dendryphiellin A ( = (+)-(1R,2S,8aR)- 1,2,6,7,8,8a-hexahydro-7-hydroxy-1,8a-dimethyl-6-oxonaphthalen-2-yl (6R*, 2E,4E)-8-hydroxy-6-methylocta-2,4-dienoate; (+)- 1 ) is isolated from cultures of the marine deuteromycete Dendryphiella salina. There is no precedent in fungi for trinor-eremophilanes or for branched C₉ carboxylic acids, the two classes of compounds constituting (+)-1. The structure is secured by NMR spectroscopy and hydrolysis of (+)-1 to give the side-chain moiety ((6R*,2E,4E)-8-hydroxy-6-methylocta-2,4-dienoic acid ( 2 )) intact, whilst the trinor-ermophilane moiety is decomposed. The absolute configuration at the trinor-eremophilane moiety is established from exciton coupling between the dienone and the diene-ester functions.     

Total Synthesis and Biological Evaluation of Seiricuprolide and Pestalotioprolide B

The first total syntheses of seiricuprolide and pestalotioprolide B, rare 14-membered α,β-unsaturated macrolides embedding a chiral epoxide motif, were achieved in 17 steps with 1.9 % and 1.6 % overall yields, respectively. Our synthesis featured the key Shiina macrolactonization to construct the 14-membered macrocyclic skeleton, Wittig olefination to generate the (E)-α,β-unsaturated ester and selective reduction of advanced chiral propargylic alcohol intermediate to enable the exclusive formation of Z- or E-olefin at C8−C9. Synthetic seiricuprolide and pestalotioprolide B were evaluated for their cytotoxic activity against the HCT116 colon cancer cell line as well as their inhibitory effect on CFTR chloride channel activity in human intestinal epithelial (T84) cells. Preliminary structure–activity relationship suggested that the C5−C6 β-epoxide moiety suppressed both biological activities.     

Ring‐Closing Metathesis and Photo‐Fries Reaction for the Construction of the Ansamycin Antibiotic Kendomycin: Development of a Protecting Group Free Oxidative Endgame

Two convergent total syntheses of the ansa‐polyketide (?)‐kendomycin ( 1 ) are described. The syntheses benefit from the use of readily available and cheap starting materials. Highly complex diastereoselective Claisen–Ireland rearrangements were used to introduce the (E)‐double bond and the C16‐Me group. The ring closure of the strained ansa macrocycle was achieved by ring‐closing metathesis and a highly efficient combination of macrolactonization and photo‐Fries reaction. A protecting group free endgame via an unstable o‐quinone is presented. Additionally some unsuccessful synthetic efforts towards the total synthesis of 1 are described.     

A Novel,Degraded Polyketidic Lactone,Leptosphaerolide, and Its Likely Diketone Precursor,Leptosphaerodione. Isolation from Cultures of the Marine Ascomycete Leptosphaeria oraemaris (LINDER)

Acetone extraction of cultures of the marine ascomycete Leptosphaeria oraemaris (LINDER) on cornmeal disk gave the novel polyketide derivative leptosphaerolide ( = (+)-7-[(1E)-l,3-dimethylpent-1-enyl]-10-hydroxy-3-methoxybenzo[1,2-b:5,4-c′]dipyran-2(9H)-one; (4+)-8) besides the o-dihydroquinone 3-[(1E)-1,3-dimethylpent-1-euyl]-8,10-dihydroxy-7-methoxy-8-(2-oxopropyl)-1H-naphtho[2,3-c]pyran-9(8H)-one ( 1 ) as a 10:9 mixture of epimers. retro-Aldol reaction of 1 gave leptosphaerodione ( = (?)-3-[(1E)-1,3-dimethylpent-1-enyl]-10-hydroxy-7-methoxy-1H-naphtho[2,3-c]pyran-8,9(8H)-dione; (?)-6) which was also present in small amounts in the extracts and which gave 1 on reaction with acetone. It is thus likely that 1 is an artefact of the extraction by acetone. Biogenetically (+)-8 might derive from (?)-6 via an unusual oxidation with loss of CO₂.     

A Model Study towards a Conceptually New Synthetic Entry into the Seco‐ and Heteroyohimbine Alkaloid Families

A model study is presented that paves the way to a new and flexible synthetic approach towards the seco‐ and heteroyohimbine alkaloid class. The key step involves a highly diastereoselective Cope rearrangement of an (E,E)‐azacyclodeca‐3,7‐diene grafted onto a 3‐ethylindole moiety to furnish a trans‐3,4‐divinylpiperidine derivative in 83% yield.     

Enantioselective total synthesis of the proposed structure of macrolide iriomoteolide-1b

An enantioselective total synthesis of the proposed structure of macrolide iriomoteolide-1b has been achieved by a convergent protocol, which was featured by an enantioselective organocatalytic transfer hydrogenation of enal, a Julia-Kocienski olefination to establish the C15-C16 E-olefin moiety, a Kulinkovich reaction associated with cyclopropyl-allyl rearrangement to produce allyl stannane and ytterbium triflate and carboxylic acid promoted allylation between allyl stannane and aldehyde with tertiary alcohol at the α-position. The construction of macrolide 2 was realized by the successful implementation of RCM utilizing 5 mol % Grubbs’s second generation catalyst at room temperature with E-isomer as a single product.     

The Thermal Diastereomerization of the Tryptophane-Derived Green Fluorescent Protein Chromophore

Summary. Two model compounds for the tryptophane variant of the green fluorescent protein chromophore containing a 3-indolyl and 2-pyrrolyl moiety were prepared. For the first one the (Z)-diastereomer was found to be more stable than the (E)-diastereomer by 5.7 kJ mol⁻¹. It could be photo-diastereomerized and its thermal equilibration was studied, whereas the second one underwent photo-destruction. From an Arrhenius plot an activation barrier for the (E) to (Z) diastereomerization of 85.6 kJ mol⁻¹ could be determined. Thus, it could be demonstrated that in contrast to the corresponding phenyl derivative studied recently the tyrosine- and tryptophane-derived chromophores of the green fluorescent protein are amenable to fast thermal diastereomerization, which is of fundamental importance for the fluorescence and photoswitching processes in the corresponding proteins.     

Asymmetric synthetic study of macrolactin analogues

We designed two aromatic analogues 1a and 1b of macrolactin A with expectation of enhancing biological activity and metabolical stability. As a result of retrosynthetic analysis of these compounds 1a-b, two synthetic strategies have been examined. The first strategy includes the enantioselective addition of nonadienyl anion, derived from 3, to aldehyde 4 as a key step. The second one includes epimerization of ynone 7 to (E,E)-conjugated dienone 31 and subsequent diastereoselective hydride-reduction of 31. Although the former route furnished no desired target, the latter one was revealed to work well for the synthesis of 1. Unfortunately, the aimed (2Z,4E)-analogue 1a could not be synthesized due to an epimerization of the (2Z)-olefin into the (2E)-olefin. However, these methods could be applied to the total asymmetric synthesis of the (2E,4E)-analogue 1b. Overall, control of all of the four stereocenters was achieved by means of asymmetric and diastereoselective reactions without using any chiral natural sources.     

Recent Advances in the Z/E Isomers of Tetraphenylethene Derivatives: Stereoselective Synthesis,AIE Mechanism,Photophysical Properties,and Application as Chemical Probes

Focused research on the Z/E isomers of tetraphenylethene (TPE) derivatives is scarce in comparison with the thousands of luminogens with AIE properties (AIEgens) that have been synthesized based on the TPE moiety. The similar chemical and physical properties of the Z/E isomers make them difficult to separate by using conventional chromatographic techniques. However, they can be isolated by introducing polar groups and the pure isomers exhibit very different photophysical properties, mechanochromism, and host–guest coordination, as well as assisting in deciphering the AIE mechanism. In this Minireview, we present an overview of the disagreement regarding the AIE mechanism between the restriction of intramolecular vibration and photoinduced Z/E isomerization. Then, we discuss the development of (Z)‐/(E)‐TPE derivatives, their use in host–guest detection, and their mechanoluminescence properties, with a focus on their photophysical characteristics. Finally, we explore the stereoselective synthesis of pure (Z)‐/(E)‐TPE derivatives.     

A semi‐synthetic analog of the cembranoid sarcophine

The title mol­ecule, 2(R)‐[(1E,3E,7S,8S,11E,13R)‐13‐hydroxy‐4,8,12‐tri­methyl‐7,8‐epoxy­cyclo­tetradeca‐1,3,11‐trien‐1‐yl]­propane‐1,2‐diol, C₂₀H₃₂O₄, is a semi‐synthetic analog of sarcophine, the natural cembranoid of marine origin, isolated from the soft coral Sarcophyton glaucum. The conformation of the 14‐membered ring differs substantially from that of sarcophine. The two OH groups of the propane‐1,2‐diol moiety form an unusual weak intramolecular hydrogen bond with an O⋯O distance of 2.788 (2) Å, and the mol­ecules are linked into double chains by intermolecular hydrogen bonds with O⋯O distances of 2.772 (2) and 2.849 (2) Å.     

Synthesis of a proposed biosynthetic intermediate of a marine cyclic ether brevisamide for study on biosynthesis of marine ladder-frame polyethers

A monocyclic ether alkaloid, brevisamide (1) was isolated from the dinoflagellate Karenia brevis that produces a variety of ladder-frame polyethers. Its proposed biosynthetic intermediate (2) comprising a linear backbone with an E-olefin functionality was synthesized for biosynthetic studies on the marine ladder-frame polyethers.     

N‐Bearing Furanone Derivatives from an Endophytic Fungus in Huperzia serrata

Two new polyketide derivatives, huaspenones C and D ( 1 and 2 , resp.), were isolated from the cultures of an endophytic fungus Peyronellaea sp. HS‐12, derived from the stems of Huperzia serrata. They share N‐bearing furan‐3(2H)‐one backbone, and 2 has an unprecedented furo[3,2‐c]pyridine skeleton. Their structures including the absolute configuration were elucidated by extensive spectroscopic analysis combined with quantum‐chemical calculations. (2E,4E)‐6‐hydroxy‐2‐methylocta‐2,4‐dienoic acid ( 3 ), a key intermediate of the biosynthesis of 1 and 2 , was also obtained from the endophyte.     

Cationic β-Scission of C−H and C−C Bonds for Selective Dimerization and Subsequent Sulfur-Free RAFT Polymerization of α-Methylstyrene and Isobutylene

A series of exo-olefin compounds ((CH₃)₂C(PhY)−CH₂C(=CH₂)PhY) were prepared by selective cationic dimerization of α-methylstyrene (αMS) derivatives (CH₂=C(CH₃)PhY) with p-toluenesulfonic acid (TsOH) via β-C−H scission. They were subsequently used as reversible chain transfer agents for sulfur-free cationic RAFT polymerization of αMS via β-C−C scission in the presence of Lewis acid catalysts such as SnCl₄. In particular, exo-olefin compounds with electron-donating substituents, such as a 4-MeO group (Y) on the aromatic ring, worked as efficient cationic RAFT agents for αMS to produce poly(αMS) with controlled molecular weights and exo-olefin terminals. Other exo-olefin compounds (R−CH₂C(=CH₂)(4-MeOPh)) with various R groups were prepared by different methods to examine the effects of R groups on the cationic RAFT polymerization. A sulfur-free cationic RAFT polymerization also proceeded for isobutylene (IB) with the exo-olefin αMS dimer ((CH₃)₂C(Ph)−CH₂C(=CH₂)Ph). Furthermore, telechelic poly(IB) with exo-olefins at both terminals was obtained with a bifunctional RAFT agent containing two exo-olefins. Finally, block copolymers of αMS and methyl methacrylate (MMA) were prepared via mechanistic transformation from cationic to radical RAFT polymerization using exo-olefin terminals containing 4-MeOPh groups as common sulfur-free RAFT groups for both cationic and radical polymerizations.     

Palladium-catalyzed vinylation of cyclohexenes using a directing-group strategy

Palladium-promoted vinylation of cyclohexenes via employment of a directing-group strategy to yield the coupled vinyl cyclohexenes with excellent regio- and stereoselectivity was studied. Typically, reaction of 2-(cyclohex-2-en-1-yl)-N-tosylacetamide ( 1a ) with (Z)-styryl bromides ( 2 ) gave cis-2-[(E)-styryl]cyclopent-3-en-1-yl-N-tosylacetamides in good to excellent yields. It is noticed that (Z)-styryl moiety was inverted into (E)-form in products. Unfortunately, (E)-styryl bromide substrates were not suitable for this reaction under the condition investigated. Further studies on norbornene system, we found that palladium-catalyzed reaction of endo-N-tosylbicyclo[2.2.1]hept-5-ene-2-carboxamide ( 6 ) with styryl bromides gave the Aza-Heck type products.     

Spectroscopic Study of the E/Z Photoisomerization of a New Cyrhetrenyl Acylhydrazone: A Potential Photoswitch and Photosensitizer†

The new cyrhetrenyl acylhydrazone [(CO)₃Re(η⁵‐C₅H₄)‐C(O)‐NH‐N = C(CH₃)‐(2‐C₄H₂S‐5‐NO₂)] ( E‐CyAH ) has been designed, synthesized and fully characterized to study the effect of having a cyrhetrenyl fragment (sensitizer) covalently bonded to an acylhydrazone moiety (switch), on its photophysical and photochemical properties. The crystal structure reveals that E‐CyAH adopts an E‐configuration around the iminic moiety [‐N = C(CH₃)]. The absorption spectrum of E‐CyAH displays two bands at 270 and 380 nm, which are mainly ascribed to π → π* intraligand (IL) and d_π → π* metal‐to‐ligand charge transfer (MLCT) transitions, being consistent with DFT/TD‐DFT calculations. Upon 365 nm irradiation, E‐CyAH photoisomerizes to Z‐CyAH , as evidenced by UV‐Vis and ¹H‐NMR spectral changes, with a quantum yield value Φ_{E‐CyAH →Z‐CyAH} of 0.30. Z‐CyAH undergoes a first‐order thermal back‐isomerization process, with a relatively short half‐life τ_1/2 of 277 min. Consequently, E‐CyAH was quantitatively recovered after 24 h, making it a fully reversible T‐type molecular photoswitch. This remarkable behavior allows us to measure the individual photophysical properties for both isomers. In addition, E‐CyAH and Z‐CyAH efficiently photosensitize the generation of singlet oxygen (O₂ (¹Δ_g)) with good yield (Φ_Δ = 0.342).     

Discovery of 4,6-bis(2-((E)-benzylidene)hydrazinyl)pyrimidin-2-Amine with Antibiotic Activity

Robenidine (E)-N′-((E)-1-(4-chlorophenyl)ethylidene)-2-(1-(4-chlorophenyl)ethylidene)hydrazine-1-carboximidhydrazide displays methicillin-resistant Staphyoccoccus aureus (MRSA) and vancomycin-resistant Enterococci (VRE) MICs of 2 μg mL⁻¹. Herein we describe the structure-activity relationship development of a novel series of guanidine to 2-aminopyrimidine isosteres that ameliorate the low levels of mammalian cytotoxicity in the lead compound while retaining good antibiotic activity. Removal of the 2-NH₂ pyrimidine moiety renders these analogues inactive. Introduction of a central 2-NH₂ triazine moiety saw a 10-fold activity reduction. Phenyl to cyclohexyl isosteres were inactive. The 4-BrPh and 4-CH₃Ph with MIC values of 2 and 4 μg mL⁻¹, against MRSA and VRE respectively, are promising candidates for future development.