The inner‐salt zwitterion,the dihydrochloride dihydrate and the dimethyl sulfoxide disolvate of 3,6‐bis(pyridin‐2‐yl)pyrazine‐2,5‐dicarboxylic acid

In the inner‐salt zwitterion of 3,6‐bis(pyridin‐2‐yl)pyrazine‐2,5‐dicarboxylic acid, (I), namely 5‐carboxy‐3‐(pyridin‐1‐ium‐2‐yl)‐6‐(pyridin‐2‐yl)pyrazine‐2‐carboxylate, [C₁₆H₁₀N₄O₄, (Ia)], the pyrazine ring has a twist–boat conformation. The opposing pyridine and pyridinium rings are almost perpendicular to one another, with a dihedral angle of 80.24 (18)°, and are inclined to the pyrazine mean plane by 36.83 (17) and 43.74 (17)°, respectively. The carboxy and carboxylate groups are inclined to the mean plane of the pyrazine ring by 43.60 (17) and 45.46 (17)°, respectively. In the crystal structure, the molecules are linked via N—H...O and O—H...O hydrogen bonds, leading to the formation of double‐stranded chains propagating in the [010] direction. On treating (Ia) with aqueous 1 M HCl, the diprotonated dihydrate form 2,2′‐(3,6‐dicarboxypyrazine‐2,5‐diyl)bis(pyridin‐1‐ium) dichloride dihydrate [C₁₆H₁₂N₄O₄²⁺·2Cl⁻·2H₂O, (Ib)] was obtained. The cation lies about an inversion centre. The pyridinium rings and carboxy groups are inclined to the planar pyrazine ring by 55.53 (9) and 19.8 (2)°, respectively. In the crystal structure, the molecules are involved in N—H...Cl, O—H...O_water and O_water—H...Cl hydrogen bonds, leading to the formation of chains propagating in the [010] direction. When (Ia) was recrystallized from dimethyl sulfoxide (DMSO), the DMSO disolvate 3,6‐bis(pyridin‐2‐yl)pyrazine‐2,5‐dicarboxylic acid dimethyl sulfoxide disolvate [C₁₆H₁₀N₄O₄·2C₂H₆OS, (Ic)] of (I) was obtained. Here, the molecule of (I) lies about an inversion centre and the pyridine rings are inclined to the planar pyrazine ring by only 23.59 (12)°. However, the carboxy groups are inclined to the pyrazine ring by 69.0 (3)°. In the crystal structure, the carboxy groups are linked to the DMSO molecules by O—H...O hydrogen bonds. In all three crystal structures, the presence of nonclassical hydrogen bonds gives rise to the formation of three‐dimensional supramolecular architectures.     

Hydrogen bonding in 1,2‐diazine–chloranilic acid (2/1) and 1,4‐diazine–chloranilic acid (2/1) determined at 110 K

The crystal structures of the isomeric title compounds [systematic names: pyridazine–2,5‐dichloro‐3,6‐dihydroxy‐p‐benzoquinone (2/1), (I), and pyrazine–2,5‐dichloro‐3,6‐dihydroxy‐p‐benzoquinone (2/1), (II)], 2C₄H₄N₂·C₆H₂Cl₂O₄, have been redetermined at 110 K. The H atom in the intermolecular O...H...N hydrogen bond in each compound was revealed to be disordered; the relative occupancies at the O and N sites are 0.33 (3) and 0.67 (3), respectively, for (I), and 0.56 (4) and 0.44 (4) for (II). The formal charges of the chloranilic acid in (I) and (II) estimated from the occupancy factors are ca−1.3 and −0.8, respectively. The geometries of the centrosymmetric chloranilic acid molecule in (I) and (II) are compared with the neutral, monoanionic and dianionic forms of chloranilic acid optimized by density functional theory (DFT) at the B3LYP/6–311+G(3df,2p) level. The result implies that the chloranilic acid molecule in (I) is close to the monoanionic state, while that in (II) is between neutral and monoanionic, consistent with the result derived from the H‐atom occupancies.     

Condensation of 1,4-diacetylpiperazine-2,5-dione with aldehydes

Condensation of 1,4-diacetylpiperazine-2,5-dione with aldehydes has been applied to the synthesis of albonoursin and unsymmetrical 3,6-diarylidenepiperazine-2,5-diones. The reaction has been extended to 1,4-diacetyl-3,6-dimethylpiperazine-2,5-dione, which gives derivatives of 2-methyl-3- phenylserine. The mechanism and stereochemistry are discussed; cis 1-acetyl-3-isobutylidene- piperazine-2,5-dione has been isolated.     

α-phenylisocinchomeronic and 4-azafluorenone 3-carboxylic acids

3,6-Dimethyl-6-phenylpyridine, obtained on phenylation of 2,5-lutidine, has been used in the synthesis of -phenylisocinchomeronic acid, derivatives of it, and also for the preparation of 4-azafluorenone 3-carboxylic acid. It was established that 4-hydroxy-3,6-dimethyl-2-phenylpyridine was formed on phenylation of 2,5-lutidine.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 3, pp. 645–648, May, 1986.     

Efficient synthesis of enantiomerically pure trans-2,5-bis(arylethynyl)pyrrolidines. A new entry into C2-symmetric chiral secondary amines

A new class of C₂-symmetric pyrrolidine derivatives bearing arylethynyl groups at the 2,5-positions has been synthesized in enantiomerically pure form from 1,7-octadiyne-3,6-diol in five steps. Some notable features of the synthesis are: (i) the formation of a separable diastereomeric mixture of pyrrolidine carbamates using a newly prepared chiral chloroformate; and (ii) the development of a new method for the deprotection of the carbamate via a novel SmI₂-promoted electron transfer process.     

Hybrid catalytic effects of K<Subscript>2</Subscript>CO<Subscript>3</Subscript> on the synthesis of salicylic acid from carboxylation of phenol with CO<Subscript>2</Subscript>

As a base-promoted Kolbe–Schmitt carboxylation reaction, the mechanism of synthesis of salicylic acid derivatives from phenols with CO₂ in the industry is still unclear, even up to now. In this paper, synthesis of 3,6-dichloro salicylic acid (3,6-DCSA) from 2,5-dichloro phenoxide and CO₂ was investigated in the presence of K₂CO₃. We show the reaction can proceed by itself, but it goes at a slower rate as well as a lower yield, compared to the case with the addition of K₂CO₃. However, the yield of 3,6-DCSA is only minorly affected by the size of K₂CO₃, which cannot be explained from the view of catalytic effect. Therefore, K₂CO₃ may on one hand act as a catalyst for the activation of CO₂ so that the reaction can be accelerated, while on the other hand, it also acts as a co-reactant in deprotonating the phenol formed by the side reaction to phenoxide, which is further converted to salicylate.     

Mixed‐Metal Coordination Cages Constructed with Pyridyl‐Functionalized β‐Diketonate Metalloligands: Syntheses,Structures and Host–Guest Properties

The design and synthesis of mixed‐metal coordination cages, which can act as hosts to encapsule guest molecules, is a subject of intensive research, and the utilization of metalloligand is an effective method to construct a designed heterometallic architecture. Herein, a series of heterometallic cages with half‐sandwich Rh, Ir and Ru fragments using Cu^II‐metalloligand as a building block by a stepwise approach is reported. The cavity sizes of the cages could be controlled easily by the lengths of the organic ligands. Because the metalloligands in the oxalate‐based cage are somewhat distorted and concave, there are weak Cu???O interactions in the molecules, forming a binuclear copper unit. By increasing the height of the cages using longer ligands, 2,5‐dichloro‐3,6‐dihydroxy‐1,4‐benzoquinone (H₂CA), the organometallic boxes display interesting host–guest behavior, which are made large enough to accommodate some large molecules, such as pyrene and [Pt(acac)₂]. Interestingly, the heterometallic cage with larger cavity size can transfer into a homometallic hexanuclear prism in the presence of pyrazine.     

Synthesis of Tetraoxygenated Terephthalates via a Dichloroquinone Route: Characterization of Cross‐Conjugated Liebermann Betaine Intermediates

Cross‐conjugated quinoid betaines 4 (2,5‐bis(alkoxycarbonyl)‐3,6‐dioxo‐4‐(1‐pyridinium‐1‐yl)cyclohexa‐1,4‐dien‐1‐olates; Liebermann betaines) were synthesized from 2,5‐dichloro‐3,6‐dioxocyclohexa‐1,4‐diene‐1,4‐dicarboxylates ( 2 ) and pyridines in acetone containing H₂O. Their structure was secured by NMR spectroscopy and by X‐ray diffraction analysis of 4f (alkoxy = EtO, pyridine = 4‐Me₂N–C₅H₄N). Betaines 4 show comparatively high reactivity towards nucleophiles as a consequence of their cross‐conjugated character. Betaine 4a and hydroxy‐3,4‐methylenedioxybenzene (sesamol) condense to give a pyridinium quinolate salt 14 which has a bifurcate H‐bond from a pyridinium N⁺–H donor to both carbonyl (C=O) and olate (C–O⁻) acceptors in the solid state. Betaine 4b hydrolyzes in aqueous solution to give diethyl 2,5‐dihydroxy‐3,6‐dioxocyclohexa‐1,4‐diene‐1,4‐dicarboxylate ( 11 ) as a pyridinium salt, or as polymeric zinc(II) complex of the dianion of 11 in the presence of ZnCl₂. Dihydroxyquinone 11 was analytically differentiated from its independently prepared hydroquinone form, diethyl 2,3,5,6‐tetrahydroxyterephthalate ( 12 ), by NMR analysis in solution and X‐ray crystal structure determination of both compounds.     

Biodegradable polymers based on renewable resources. VII. Novel random and alternating copolycarbonates from 1,4:3,6‐dianhydrohexitols and aliphatic diols

Novel copolycarbonates containing 1,4:3,6‐dianhydro‐D ‐glucitol or 1,4:3,6‐dianhydro‐D ‐mannitol units, with various methylene chain lengths, were synthesized by bulk and solution polycondensations, of several combinations of carbonate‐modified sugar derivatives and aliphatic diols. Bulk polycondensations of 1,4:3,6‐dianhydro‐2,5‐bis‐O‐(phenoxycarbonyl)‐D ‐glucitol or 1,4:3,6‐dianhydro‐2,5‐bis‐O‐(phenoxycarbonyl)‐D ‐mannitol with four α,ω‐alkanediols having methylene chain lengths of 4, 6, 8, and 10, respectively, at 180 °C afforded the corresponding copolycarbonates with number‐average molecular weight (M_n) values up to 19.₂ × 10³. ¹³C NMR analysis disclosed that these polymers had scrambled structures in which the sugar carbonate and aliphatic carbonate moieties were nearly randomly distributed along a polymer chain. However, solution polycondensations between 1,4:3,6‐dianhydro‐2,5‐bis‐O‐(p‐nitrophenoxycarbonyl)‐D ‐glucitol or 1,4:3,6‐dianhydro‐2,5‐bis‐O‐(p‐nitrophenoxycarbonyl)‐D ‐mannitol, and the α,ω‐alkanediols in sulfolane or dimethyl sulfoxide at 60 °C gave well‐defined copolycarbonates having regular structures consisting of alternating sugar carbonate and aliphatic carbonate moieties with M_n values up to 33.₈ × 10³. Differential scanning calorimetry demonstrated that all the copolycarbonates were amorphous with glass‐transition temperatures ranging from 1 to 65 °C, which decreased with increasing lengths of the methylene chain of the aliphatic diols. Additionally, all the copolycarbonates were stable up to 310–330 °C as estimated by thermogravimetric analysis. © 2003 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 41: 2312–2321, 2003     

Blocking-Deblocking of the NH-Functionality of Uracil and its Derivatives

We have been interested in various 5,6-dihydrouracils and 5,6-dihydroorotic acid derivatives as possible inhibitors of dihydrouracil dehydrogenase, dihydroorotase, and dihydroorotate dehydrogenase.² The known methods for the synthesis of 5,6-dihydrouracils and 5,6-dihydroorotic acid derivatives are either a low yield cyclization process³ or a catalytic hydrogenation⁴ procedure which frequently led to the elimination of desired functionality⁵. In order to obviate these difficulties, we have recently developed⁶ a mild non-catalytic method for the reduction of 5,6-double bond of uracil and orotic acid derivatives. By using lithium tri-sec-butyl borohydride^7–8 we have been able to reduce N₁, N₃-dialkyl uracil and orotic acid derivatives to the corresponding 5,6-dihydrouracil and orotic acid derivatives as shown in scheme (1).     

Stereoselectivity in the construction of rigidified homoserine analogues

Methyl substituted cyclohexyl-1-amino-3-hydroxy-1-carboxylic acid derivatives have been prepared from 5,5-tethered dienes of (2R)-2,5-dihydro-2-isopropyl-3,6-dimethoxypyrazine in stereoselective syntheses. Ring closing metathesis reaction of the diene 2 afforded a heterospirenone which was the substrate for conjugate addition with an alkyl cuprate. Reduction of the adduct followed by hydrolytic cleavage of the heterocyclic ring provided a cyclic α-amino acid derivative. The absolute configuration at the new stereocenters in the products were established by X-ray crystallography analyses.     

Regioselective double Boekelheide reaction: first synthesis of 3,6-dialkylpyrazine-2,5-dicarboxaldehydes from dl-alanine

Pyrazine-2,5-dicarboxaldehyde was synthesized on a multi-gram scale by MnO₂ oxidation of 2,5-bis(hydroxymethyl)pyrazine, which in turn was obtained from 2,5-dimethylpyrazine employing double Boekelheide reaction as a key step as reported previously. This reaction was subsequently utilized in a regioselective fashion as a key step to synthesize efficiently, for the first time, 3,6-di(long-chain)alkylpyrazine-2,5-dicarboxaldehydes starting from dl-alanine. These monomers are certain to have importance as electron deficient and chemically versatile components for new materials development.     

Chiral building blocks from biomass: 2,5-diamino-2,5-dideoxy-1,4-3,6-dianhydroiditol

An efficient route towards the synthesis of 2,5-diamino-2,5-dideoxy-1,4-3,6-dianhydroiditol 4 has been developed resulting in significant improvements in both isolated yields and purity when compared to literature procedures. As a consequence, resin-grade 2,5-diamino-2,5-dideoxy-1,4-3,6-dianhydroiditol 4 has become available for laboratory scale step-growth polymer synthesis. Additionally, an interesting renewable chiral 2-amino-2-deoxy-1,4-3,6-dianhydroiditol 10, has been isolated.     

Molecularly imprinted stir bar sorptive extraction coupled with high-performance liquid chromatography for trace analysis of naphthalene sulfonates in seawater

In this paper, a novel molecularly imprinted polymer coated stir bar has been used to selectively extract naphthalene sulfonates (NS_s) directly from seawater sample. 1-Naphthalene sulfonic acid (1-NS) was used as template molecule. The effects of different parameters were optimized on the extraction efficiency and the optimum conditions were established as: the absorption and desorption times were fixed, respectively, at 10 and 15 min, stirring speed was 700 rpm, pH was adjusted to 4.1, amount of NaCl was 1 mol L^?1 and extraction process was performed at a temperature of 50 °C. The linear ranges were 2–250 µg L^?1 for 3,6-NDS-1-OH (1-naphthol-3,6-disulfonic acid), 4–250 µg L^?1 for 2-NS (2-naphthalene sulfonate) and 3–250 µg L^?1 for 1-NS. The detection limits were within the range of 0.32–0.95 µg L^?1. Under optimum conditions, the detection limits of the NSs were 0.84, 0.95 and 0.32 µg L^?1 with the enrichment factor of 117-, 41- and 77-fold for 2-NS, 1-NS, and 6-NDS-1-OH, respectively. The repeatability of the method was satisfactory (0.53 ≤ RSD ≤6.0 %, n = 10). The method has been successfully applied for the analysis of trace amounts of three naphthalene sulfonates in seawater of Chabahar Bay.     

Intramolecular single and double proton transfer in benzoxazole derivatives

The “double” derivatives of benzoxazole, bis-2,5-(2-benzoxazolyl)hydroquinone (II) and bis-3,6-(2-benzoxazolyl)-pyrocatochol (III), have been investigated. In (II), only one proton is transferred in the S₁ state. Primary and tautomeric forms exist in a rapidly established equilibrium. In (III), two tautomers were detected. One is generated in the S₁ state by a double proton transfer without a potential barrier, while the other, generated by a single proton transfer, is already present in trace amounts in the S₀ state.     

Hydrogen‐bonded structures of the isomeric 2‐, 3‐ and 4‐carbamoylpyridinium hydrogen chloranilates

In the three isomeric salts, all C₆H₇N₂O⁺·C₆HCl₂O₄⁻, of chloranilic acid (2,5‐dichloro‐3,6‐dihydroxy‐1,4‐benzoquinone) with 2‐, 3‐ and 4‐carbamoylpyridine, namely, 2‐carbamoylpyridinium hydrogen chloranilate (systematic name: 2‐carbamoylpyridinium 2,5‐dichloro‐4‐hydroxy‐3,6‐dioxocyclohexa‐1,4‐dienolate), (I), 3‐carbamoylpyridinium hydrogen chloranilate, (II), and 4‐carbamoylpyridinium hydrogen chloranilate, (III), acid–base interactions involving H‐atom transfer are observed. The shortest interactions between the cation and the anion in (I) and (II) are pyridinium N—H...(O,O) bifurcated hydrogen bonds, which act as the primary intermolecular interaction in each crystal structure. In (III), an amide N—H...(O,O) bifurcated hydrogen bond, which is much weaker than the bifurcated hydrogen bonds in (I) and (II), connects the cation and the anion.     

Spectroscopic,thermal studies and molecular modelling of charge transfer complexation between 5-amino-2-methoxypyridine with chloranilic acid in different polar solvents

Charge transfer (CT) interaction between 5-amino-2-methoxypyridine (5AMPy), as electron donor (proton acceptor), with 3,6-dichloro-2,5-dihydroxy-p-benzoquinone (chloranilic acid, H₂CA), as electron acceptor (proton donor), has been investigated spectrophotometrically in the polar protic solvents ethanol (EtOH) and methanol (MeOH) and the aprotic one acetonitrile (AN). Pink-coloured solution is formed instantaneously upon mixing 5AMPy with H₂CA solutions in all solvents, which is the hallmark evidence of CT complex formation. Based on Job’s method of continuous variations, as well as spectrophotometric titrations, the stoichiometry of the complex was found to be 1:1 [(5AMPy) (H₂CA)] in all solvents. Benesi–Hildebrand equation has been applied to estimate the formation constant of the produced CT complex (K_CT) and its molar absorptivity (ε), they reached high values, confirming the complex high stability. Solid CT complex has been synthesised and analysed by elemental analyses and FTIR, ¹H NMR spectroscopies, where 2:1 [(5AMPy)₂ (H₂CA)] CT complex was obtained.     

A stereoselective synthesis of a spiro-bridged bis(α-amino acid) derivative based on Ru(II)-catalysed RCM reactions

Methodology for a stereoselective synthesis of a member of a novel family of spiro-bridged bis(α-amino acid) derivatives is described. The key step in the construction is a spirane annulation reaction effected by a Ru(II)-catalysed ring-closing metathesis (RCM) reaction of an appropriately substituted tetraene. The latter became available after stereocontrolled allylations of 3,3-bis[2-((2S,5R)-5-isopropyl-3,6-dimethoxy-2,5-dihydropyrazin-2-yl)ethyl]-1,4-pentadiene, which was prepared in several reaction steps from (2R)-2,5-dihydro-2-isopropyl-3,6-dimethoxypyrazine as a chiral starting material.     

X-ray studies of three 3,6-bis(pyridin-2-yl)-1,2,4,5-tetrazine cocrystals: an unexpected molecular conformation stabilized by hydrogen bonds

The results of the X-ray structure analysis of three novel 3,6-bis(pyridin-2-yl)-1,2,4,5-tetrazine cocrystals are presented. These are 3,6-bis(pyridin-2-yl)-1,2,4,5-tetrazine–2,4,6-tribromophenol (1/2), C₁₂H₈N₆·2C₆H₃Br₃O, 3,6-bis(pyridin-2-yl)-1,2,4,5-tetrazine–isonicotinic acid N-oxide (1/2), C₁₂H₈N₆·2C₆H₅NO₃, and 3,6-bis(pyridin-2-yl)-1,2,4,5-tetrazine–4-nitrobenzenesulfonamide (1/1), C₁₂H₈N₆·C₆H₆N₂O₄S. Special attention is paid to a conformational analysis of the title tetrazine molecule in known crystal structures. Quantum chemistry methods are used to compare the energetic parameters of the investigated conformations. A structural analysis of the hydrogen and halogen bonds with acceptor aromatic tetrazine and pyrazine rings is conducted in order to elucidate factors responsible for conformational stability.     

TRITHIA-DIPHOSPHABIYCLO[2.2.1]HEPTANE

Abstract

3,6-Dialkyl-2,5-Dithioxo-1,4,2λ⁵,5λ⁵-dithiadiphosphorinan-2,5-disulfides (1) react with PSCI₃, to give 3,6-Dialkyl(diaryl)-1,4-dithioxo-2,5,7-trithia-lλ⁵,4λ⁵ diphosphabicyclo[2.2.1]heptanes (2). The reaction mechanism of their formation. and the stereochemistry are discussed. By reduction of 2 with (n-C₄H₉)₃P or (C₆H₅),P 3,6-Dialkyl-2,5,7-trithia-1λ³,4λ³-diphosphabicyclo[2.2.1]heptanes (3) are formed. 2c reacts with one mole of (C₆H₅)₃P to give 3,6-Diethyl-l-thioxo-2,5,7-trithia-lλ⁵,4λ³- diphosphabicyclo(2.2.1]heptane, 4c.

3,6-Dialkyl-2,5-dithioxo-1.4,2λ⁵,5λ⁵-dithiadiphosphorinan-2,5-disulfide (I) reagieren mit PSCI₃ zu 3,6-Dialkyl(diaryl)-1,4-dithioxo-2,5,7-trithia-lλ⁵,4λ⁵-diphosphabicyclo[2.2.l]heptanen (2). Der Reaktionsmechanismus ihrer Bildung und ihre Stereochemie werden diskutiert. Die Reduktion von 2 mit (n-C₄H₉)₃,P oder (C₆H₅)₃P führt zu 3,6-Dialkyl-2,5,7-trithia-1λ³,4λ³-diphosphabicyclo[2.2.1] heptanen(3). 2c reagiert mit einer äquimolaren Menge (C₆H₅)₃,P zu 3,6-Diethyl-l-thioxo-2,5,7-trithia-lλ⁵,4λ³- diphosphabicyclo[2.2.1]heptan, 4c.