An alternative to the “Star Path” enhancement of the ADMA linear scaling method for protein modeling

With the aim of improving the performance of macromolecular quantum chemistry conformation analysis and reaction path following methods, the Adjustable Density Matrix Assembler (ADMA) method has already been combined with some faster although less accurate density matrix extrapolation methods, such as the Löwdin‐Inverse‐Löwdin (LIL) extrapolation along a potential energy surface, and a strategically arranged back‐and‐forth switching between these methods has been proven to be advantageous. Here, an alternative approach is proposed and investigated, based on several actual test calculations, where the “inexpensive” LIL density matrix extrapolation steps are replaced by only somewhat more expensive, but still ADMA‐based calculations, where in the “rough‐search stage,” only interactions of shorter distances within the macromolecule are considered. It is shown that this approach is viable, as an alternative to the “Star Path” method including both ADMA and LIL steps. © 2017 Wiley Periodicals, Inc.     

Ultrafast Intercalation Enabled by Strong Solvent–Host Interactions: Understanding Solvent Effect at the Atomic Level

Solvents play an essential role in many areas of chemistry and is the cornerstone of understanding reactivity in solution‐phase reactions. Solvent effects have been widely observed in intercalation reactions; however, understanding of the influence of solvents on the thermodynamics and kinetics remains largely elusive in intercalation chemistry. Now, the solvent‐dependent kinetics of ferrocene intercalation into a layered vanadyl phosphate (VOPO₄?2 H₂O) host is presented, with a special focus on primary alcohols. From methanol to 1‐hexnaol, the intercalation rate peaks in 1‐propanol (80 times faster than the slowest case in methanol). Similar kinetics of exfoliation are also found in these solvents without ferrocene. The correlation between intercalation and exfoliation is understood at atomic level by DFT calculations, which reveal the role of pre‐intercalated solvent molecules play in intralayer interactions, interlayer expansion, and layer sliding.