An investigation of the origins of contrast in NMR spin echo images of plant tissue.

The effects that the spatial distribution of water protons and their transverse relaxation times have on the image contrast of spin echo images of courgette was investigated. The T2-weighted image of courgette contains the most anatomical information. The image contrast was explained using a phenomenological theory based on the Bloch equations, which gave an insight into the morphology and microdynamics of water in the plant tissue. The perceived contrast in the spin echo images of courgette, glucose and Sephadex bead solutions can be dramatically altered by keeping all the imaging acquisition parameters constant, such as the recycle and echo time, but reducing the interpulse spacing by introducing a CPMG train of 180 degrees pulses into the middle of the sequence. These changes were interpreted by considering the microenvironment of the water. This work demonstrates that the origin of image contrast in T2-weighted images of plant tissue can be understood using the water proton transverse relaxation theory developed by Hills et al.     

Diffusion measurements using the nonlinear stimulated echo

The nonlinear stimulated echo that is generated by a sequence of three radiofrequency pulses, 90 degrees-tau(1)-90 degrees-tau(2)-45 degrees, in high magnetic fields (or at low temperatures) in the presence of pulsed or steady field gradients can be applied for measurements of the diffusion coefficient. Corresponding test experiments are reported. Steady gradients can be used without knowledge of the relaxation times. Remarkably the attenuation of the nonlinear stimulated echo by diffusion is substantially stronger than in the case of the ordinary stimulated echo.     

NMR velocimetry with 13-interval stimulated echo multi-slice imaging in natural porous media under low flow rates

Characterization and quantification of root water uptake processes play a key role in understanding and managing the effects of global climate change on agricultural production and ecosystem dynamics. Part of this understanding is related to the flow of water towards plant roots in soils. In this study we demonstrate for the first time, to our knowledge, that fluid flow in the voids of the pore space of a model soil system (natural sand) can be detected and mapped to an NMR image for mean flows as low as 0.06 mm/s even under the influence of internal magnetic field gradients. To accomplish this we combined multi-slice imaging with a 13-interval pulse sequence to the NMR pulse sequence 13-interval stimulated echo multi-slice imaging (13-interval STEMSI). The result is a largely reduced influence of the internal magnetic field gradients, leading to an improved signal-to-noise ratio which in turn enables one to acquire velocity maps where conventional stimulated echo methods fail.     

Application of multiple inversion recovery for suppression of macromolecule resonances in short echo time (1)H NMR spectroscopy of human brain.

Macromolecules contribute broad "background" resonances to the (1)H NMR brain spectra at short echo times. The application of long echo times is the most widely used method for removing these resonances. Here, it is demonstrated that these background resonances may be suppressed at short echo times using multiple inversion recovery (MIR). In the technique presented, the MIR sequence consists of four adiabatic inversion pulses, applied preparatory to a 20-ms echo time stimulated echo localization sequence. The inversion times (359, 157, 69, and 20 ms) were selected to preferentially suppress macromolecules with longitudinal relaxation times between 38 and 300 ms. While the resulting spectra have lower overall signal-to-noise, baseline contributions from macromolecules are greatly reduced. Unlike the typical long TE acquisitions, the short TE MIR acquisition preserves the myo-inositol resonance.     

Formation of stimulated photon echo in ytterbium vapours in a longitudinal magnetic field

Intensity and polarization are derived for stimulated photon echo produced in a longitudinal magnetic field by transitions between resonance levels with the angular momenta 0 and 1. It is shown that stimulated photon echo generated in a longitudinal magnetic field can be used to obtain spectroscopic data on the times of relaxation of population, orientation, and alignment of the level ³P₁ of a ¹⁷⁴Yb atom.     

The first proton NMR imaging of ice: stray-field imaging and relaxation studies

A proton magnetic resonance image of ice was observed with the stray-field (STRAFI) technique. A preliminary study of proton relaxation times was performed in water and ice, at different temperatures. For example, a value of 3.5 micros for the spin-spin relaxation time, T(2), was found in ice at 258 K. Such a short T(2) value leads to significant signal loss, as compared to liquid water, and to a shortening of the STRAFI echo-trains. In particular, a STRAFI signal for protons in ice could be observed only at echo times as short as 15 and 25 micros, for RF pulse durations corresponding to 90 degrees and 50 degrees magnetisation tip angles, respectively. This behaviour is in contrast with that of deuteriated water. Imaging ice, as shown here, opens new prospects in studies involving environmental and materials science, for example.     

Diffusion studies in porous media with the "inside-out" technique

Diffusion measurements of water in a glass beads porous media were carried out by the "One-Sided Access" sensor. An approach to determine the long time mean square displacement of hydrogen molecules by measuring the ratio of stimulated echo to primary echo in a three pulse sequence in the presence of permanent static field gradient is analysed. The difference between the apparent diffusion coefficient in a pure water sample and in water/glass beads mixtures becomes visible.     

Acquisition of pure-phase diffusion spectra using oscillating-gradient spin echo

Oscillating-gradient spin echo (OGSE) diffusion experiments have long been used to measure the short-time apparent diffusion coefficient, D(app)(t), in the presence of restricted diffusion, as well as the spectrum of the slow-motion velocity autocorrelation function. In this work, we focus on two previously unexplored aspects of OGSE experiments: convection compensation and acquisition of pure-phase diffusion spectra in the presence of homonuclear scalar couplings. We demonstrate that convection compensation afforded by single-echo OGSE compares well with that in double-echo convection-compensated PGSE experiments. We also show that, in the presence of homonuclear scalar couplings, setting the OGSE echo time to 1/2J enables acquisition of pure-phase diffusion spectra and yields more reliable D estimates than mixed-phase PGSE or OGSE spectra. Pure-phase OGSE acquisition is also compatible with measurements of the apparent diffusion coefficient at an arbitrary diffusion time. These features of OGSE can be valuable in diffusion measurements of scalar-coupled small-molecule probes in cellular and other heterogeneous systems.     

Multiple echo diffusion tensor acquisition technique

The standard method of diffusion tensor imaging (DTI) involves one diffusion-sensitizing gradient direction per acquired signal. This paper describes an alternative method in which the entire direction set required for calculating the diffusion tensor is captured in a few scans. In this method, a series of radiofrequency (RF) pulses are applied, resulting in a train of spin echoes. A pattern of applied magnetic field gradients between the RF pulses generates a different diffusion weighting in both magnitude and direction for each echo, resulting in a dataset sufficient to determine the tensor. This significantly reduces the time required for a full DTI scan and potentially allows a tradeoff of this time for image quality. In the present work, this method is demonstrated in an anisotropic diffusion phantom (asparagus).     

Constant time steady gradient NMR diffusometry using the secondary stimulated echo

A pulse sequence producing a second stimulated echo is suggested for the compensation of relaxation and residual dipolar interaction effects in steady gradient spin echo diffusometry. Steady field gradients of considerable strength exist in the fringe field of NMR magnets, for instance. While the absolute echo time of the second stimulated echo is kept constant throughout the experiment, the interval between the first two radiofrequency pulses is augmented leading to a modulation of the amplitude of that second stimulated echo by self-diffusion only. The unique feature of this technique is that it is of a single-scan/single-echo-signal nature. That is, no reference signals neither of the same pulse sequence nor of separate experiments are needed. The new method was tested with poly(ethylene oxide) melts and proved to provide reliable data for (time dependent) self-diffusion coefficients down to the physical limit (D approximately 10(-15)m(2)/s) when flip-flop spin diffusion starts to become effective.     

Accurate and sensitive measurements of magnetic susceptibility using echo planar imaging

Susceptibility differences are common causes for artifacts in magnetic resonance (MR); therefore, it is important to choose phantom materials in a way that these artifacts are kept at a minimum. In this study, a previously proposed MR imaging (MRI) method [Beuf O, Briguet A, Lissac M, Davis R. Magnetic resonance imaging for the determination of magnetic susceptibility of materials. J Magn Reson 1996; Series B(112):111-118] was improved to facilitate sensitive in-house measurements of different phantom materials so that such artifacts can more easily be minimized. Using standard MRI protocols and distilled water as reference, we measured magnetic volume susceptibility differences with a clinical MR system. Two imaging techniques, echo planar imaging (EPI) and spin echo, were compared using liquid samples whose susceptibilities were verified by MR spectroscopy. The EPI sequence has a very narrow bandwidth in the phase-encoding direction, which gives an increased sensitivity to magnetic field inhomogeneities. All MRI measurements were evaluated in two ways: (1) manual image analysis and (2) model fitting. The narrow bandwidth of the EPI made it possible to detect very small susceptibility differences (equivalent susceptibility difference, Deltachi(e)> or =0.02 ppm), and even plastics could be measured. Model fitting yielded high accuracy and high sensitivity and was less sensitive to other image artifacts as compared with manual image analysis.     

Fast imaging with the MMME sequence

The multiple-modulation-multiple-echo sequence, previously used for rapid measurement of diffusion, is extended to a method for single shot imaging. Removing the gradient switching requirement during the application of RF pulses by a constant frequency encoding gradient can shorten experiment time for ultrafast imaging. However, having the gradient on during the pulses gives rise to echo shape variations from off-resonance effects, which make the image reconstruction difficult. In this paper, we propose a simple method to deconvolve the echo shape variation from the true one-dimensional image. This method is extended to two-dimensional imaging by adding phase encoding gradients between echoes during the acquisition period to phase encode each echo separately. Slice selection is achieved by a frequency selective pulse at the beginning of the sequence. Imaging speed is mainly limited by the phase encoding gradients' switching times and echo overlap when echo spacing is very short. This technique can produce a single-shot image of sub-millimeter resolution in 5 ms.     

Relaxation effects in the quantification of fat using gradient echo imaging

Quantification of fat has been investigated using images acquired from multiple gradient echoes. The evolution of the signal with echo time and flip angle was measured in phantoms of known fat and water composition and in 21 research subjects with fatty liver. Data were compared to different models of the signal equation, in which each model makes different assumptions about the T1 and/or T2* relaxation effects. A range of T1, T2*, fat fraction and number of echoes was investigated to cover situations of relevance to clinical imaging. Results indicate that quantification is most accurate at low flip angles (to minimize T1 effects) with a small number of echoes (to minimize spectral broadening effects). At short echo times, the spectral broadening effects manifest as a short apparent T2 for the fat component.     

FID-acquired-echos (FAcE): a short echo time imaging method for flow artefact suppression.

The FID-Acquired-Echo sequence (FAcE) is a magnetic resonance imaging technique using fractional-echo acquisitions, with sequential separate sampling of the right and left k-space half planes. It reduces the minimal echo times by about a factor of two, compared to conventional full-(gradient)-echo sampling schemes. With this sequence, implemented on a commercial 1.5 Tesla whole body system, high resolution images are acquired with typical echo times between 3 and 4.5 msec. Using short echo times the signal dephasing caused by velocity and higher order spin motion is reduced. Further, due to the modified sampling scheme, the sequence exhibits, for triggered studies, partially a compensation of motion-induced phase shifts in the frequency-encoding direction. Thus, the sequence offers an alternative means for the reduction of motion-induced image artefacts to the use of flow compensating gradients, which usually makes a sequence more sensitive to higher order motion and introduces further eddy currents. Besides potential application for imaging of nuclei and tissues with short T2 relaxation times, and non-ECG-triggered in-flow angiography, the main application seems to be triggered-phase contrast imaging with focus on quantitation of blood flow. Its usefulness is largest in cases with irregular flow patterns, where considerable in-plane flow occurs.     

Constant gradient stimulated echo studies of diffusion in porous materials at high spectrometer fields

A high field strength, constant gradient stimulated-echo pulse sequence is applied to a model heterogeneous system consisting of randomly packed beds of glass microspheres. A multiple exponential analysis of the dependence of the stimulated echo amplitude on diffusion time, Δ, yields coefficients that depend explicitly on both the wavevector, q and on the time delay, δ. The wavevector and δ-dependence of the coefficients is analyzed both theoretically and experimentally and shown to be sensitive to the effects of coupled relaxation and diffusion. It is proposed that these effects could be exploited as a new probe of microstructure.     

Comparison of multiple sclerosis clinical subgroups using navigated spin echo diffusion-weighted imaging.

The apparent diffusion coefficient (ADC) of tissue provides an indication of the size, shape, and orientation of the water spaces in tissue. Thus, pathologic differences between lesions in multiple sclerosis (MS) patients with different clinical courses may be reflected by changes in ADC measurements in lesions and white matter. Twelve healthy subjects and 35 MS patients with a relapsing-remitting (n = 10), benign (n = 8), secondary progressive (n = 8) and primary progressive (n = 9) clinical course were studied. T2-weighted and post-gadolinium T1-weighted images were obtained using a 1.5 T Signa Echospeed magnetic resonance imaging (MRI) system. Diffusion-weighted imaging was implemented using a pulsed gradient spin echo (PGSE) sequence with diffusion gradients applied in turn along three orthogonal directions in order to obtain the average apparent diffusion coefficient (ADCav). Navigator echo correction and cardiac gating were used to reduce motion artifact. ADC maps were derived using a two point calculation based on the Stejskal-Tanner formula. Diffusion anisotropy was estimated using the van Gelderen formula to calculate an anisotropy index. MS lesions had a higher ADC and reduced anisotropy compared with normal appearing white matter. Highest ADC values were found in gadolinium enhancing lesions and non-enhancing hypointense lesions on T1-weighted imaging. MS white matter had a slightly higher ADC and lower anisotropy than white matter of healthy subjects. Lesion and white matter ADC values did not differ between patients with different clinical courses of MS. There was no correlation between lesion ADC and disability. Diffusion-weighted imaging with measurement of ADC using the PGSE method provides quantitative information on acute edematous MS lesions and chronic lesions associated with demyelination and axonal loss but does not distinguish between clinical subtypes of MS.     

Cross-term-compensated pulsed-gradient stimulated echo MR with asymmetric gradient pulse lengths

The magic asymmetric gradient stimulated echo (MAGSTE) sequence developed to compensate background-gradient cross-terms in the preparation and readout interval independently, assumes identical lengths for the two gradient pulses applied in each interval. However, this approach is rather inefficient if some extra delay time is present in one half of an interval, e.g. as required for special RF excitations or spatial encoding prior to the stimulated echo in MR imaging. Therefore, a generalized version of the sequence is presented that considers different gradient pulse lengths within an interval. It is shown theoretically that (i) for any pulse lengths a "magic" amplitude ratio exists which ensures the desired cross-term compensation in each interval and that (ii) prolonging one of the gradients can deliver a considerably higher diffusion weighting efficiency. These results are confirmed in MR imaging experiments on phantoms and in vivo in the human brain at 3T using an echo-planar trajectory. In the examples shown, typically 10 times higher b values can be achieved or an echo time reduction with a 40% signal gain in brain white matter. Thus, in case of asymmetric timing requirements, the generalized MAGSTE sequence with different gradient pulse lengths may help to overcome signal-to-noise limitations in diffusion weighted MR.     

Short echo time proton spectroscopy of the brain in healthy volunteers using an insert gradient head coil

An insert gradient head coil with built-in X, Y, and Z gradients was used for localized proton spectroscopy in the brain of healthy volunteers, using short echo time stimulated echo acquisition mode (STEAM) sequences. Volume of interest size was 3.4 ml, repetition time was 6.0 s, and echo times were 10 and 20 ms, respectively. Good quality proton spectra with practically no eddy current artefacts were acquired allowing observation of strongly coupled compounds, and compounds with short T₂ relaxation times. The gradient head coil thus permits further studies of compounds such as glutamine/glutamate and myo-inositols. These compounds were more prominent within grey matter than within white matter. Rough estimations of metabolite concentrations using water as an internal standard were in good agreement with previous reports.     

Reducing ghosting due to k-space discontinuities in fast spin echo (FSE) imaging by a new combination of k-space ordering and parallel imaging

In multi-echo imaging sequences like fast spin echo (FSE), the point spread function (PSF) in the phase encoding direction contains significant secondary peaks (sidebands). This is due to discontinuities in adjacent k-space data obtained at different echo times caused by T₂ decay, and leads to ghosting and hence reduced image quality. Recently, utilising multiple coils for signal reception has become the standard configuration for MR systems due to the additional flexibility that parallel imaging (PI) methods can provide. PI methods generally obtain more data than is required to reconstruct an image. Here, this redundancy in information is exploited to reduce discontinuity-related ghosting in FSE imaging. Adjacent phase encoded k-space lines are acquired at different echo times alternately in the regions of discontinuity (called ‘feathering’). This moves the resulting ghost artefacts to the edges of the field of view. This property of the ghost then makes them amenable to removal using PI methods. With ‘feathered’ array coil data it is possible to reconstruct data over the region of the discontinuity from both echo times. By combining this data, a significant reduction in ghosting can be achieved. We show this approach to be effective through simulated and acquired MRI data.     

Photon echo in gases: From the non-Faraday rotation to unpolarized echo

A retrospective review of both theoretical and experimental works on photon echo in gases in the presence of longitudinal magnetic fields is presented from the viewpoint of new possibilities opened by this research for polarization echo spectroscopy of gases. The main attention is given to the physical scenario of the magnetic field’s effect on the properties of the photon echo. New results on the photon echo and stimulated photon echo in ytterbium vapor at the 1 ? 0 transition in the presence of the longitudinal magnetic field whose strength ranges from weak to strong are presented. Possible applications of the magnetic field effects for optical data storage and processing are analyzed.