Determination of absolute photoionization cross‐sections of aromatics and aromatic derivatives

The absolute photoionization cross‐sections of aromatics and aromatic derivatives including toluene, ethylbenzene, n‐propylbenzene, o‐xylene, m‐xylene, p‐xylene, 1,3,5‐trimethylbenzene, styrene, phenylacetylene, indene, indane, 1‐methylnaphthalene, benzyl alcohol and benzaldehyde were measured at the photon energy range from ionization thresholds to 11.7 eV. The experiments were performed by tunable synchrotron vacuum ultraviolet (VUV) photoionization mass spectrometry. Benzene was chosen as a calibration standard, since its photoionization cross‐section is well known. Binary liquid mixtures of the investigated molecules and benzene were used in the measurements. Photo‐induced fragments from the molecules were also observed, and their photoionization cross‐sections are also presented. Copyright © 2009 John Wiley & Sons, Ltd.     

Absolute photoionization cross sections of furanic fuels: 2‐ethylfuran, 2‐acetylfuran and furfural

Absolute photoionization cross sections of the molecules 2‐ethylfuran, 2‐acetylfuran and furfural, including partial ionization cross sections for the dissociative ionized fragments, are measured for the first time. These measurements are important because they allow fuel quantification via photoionization mass spectrometry and the development of quantitative kinetic modeling for the complex combustion of potential fuels. The experiments are carried out using synchrotron photoionization mass spectrometry with an orthogonal time‐of‐flight spectrometer used for mass analysis at the Advanced Light Source of Lawrence Berkeley National Laboratory. The CBS‐QB3 calculations of adiabatic ionization energies and appearance energies agree well with the experimental results. Several bond dissociation energies are also derived and presented. Copyright © 2015 John Wiley & Sons, Ltd.     

Theoretical Study on Gas—phase Pyrolytic Reactions of N—Ethyl,Isopropyl and N—t—Butyl Substituted 2—Aminopyrazine

Density functional theory (DFT) and ab initio methods were used to study gas‐phase pyrolytic reaction mechanisms of iV‐ethyl, N‐isopropyl and N‐t‐butyl substituted 2‐aminopyrazine at B3LYP/6–31G* and MP2/6–31G*, respectively. Single‐point energies of all optimized molecular geometries were calculated at B3LYP/6–311 + G(2d,p) level. Results show that the pyrolytic reactions were carried out through a unimolecular first‐order mechanism which were caused by the migration of atom H(17) via a six‐member ring transition state. The activation energies which were verified by vibrational analysis and correlated with zero‐point energies along the reaction channel at B3LYP/6–311 + G(2d,p) level were 252.02 kJ. mo^?1 (N‐ethyl substituted), 235.92 kJ‐mol^?1 (N‐t‐isopropyl substituted) and 234.27 kJ‐mol^?1 (N‐t‐butyl substituted), respectively. The results were in good agreement with available experimental data.     

Regiodirected Synthesis and Stereochemistry of 2,4,8‐Trialkyl‐3‐thia‐1,5‐diazabicyclo[3.2.1]octanes and α,ω‐Bis(2,4,6‐trialkyl‐1,3,5‐dithiazinane‐5‐yl)alkanes

2,4,8‐Trialkyl‐3‐thia‐1,5‐diazabicyclo[3.2.1]octanes have been obtained by the regioselective and stereoselective cyclocondensation of 1,2‐ethanediamine with aldehydes RCHO (R═Me, Et, Prⁿ, Buⁿ, Pentⁿ) and H₂S at molar ratio 1:3:2 at 0°C. The increase in molar ratio of thiomethylation mixture RCHO–H₂S (6:4) at 40°C resulted in selective formation of bis‐(2,4,6‐trialkyl‐1,3,5‐dithiazinane‐5‐yl)ethanes. Cyclothiomethylation of aliphatic α,ω‐diamines with aldehydes RCHO (R═Me, Et) and H₂S at molar ratio 1:6:4 and at 40°С led to α,ω‐bis(2,4,6‐trialkyl‐1,3,5‐dithiazinane‐5‐yl)alkanes. Stereochemistry of 2,4,8‐trialkyl‐3‐thia‐1,5‐diazabicyclo[3.2.1]octanes have been determined by means of ¹H and ¹³С NMR spectroscopy and further supported by DFT calculations at the B3LYP/6‐31G(d,p) level. The structure of α,ω‐bis(2,4,6‐trialkyl‐1,3,5‐dithiazinane‐5‐yl)alkanes was confirmed by single‐crystal X‐ray diffraction study.     

Matrix solid‐phase dispersion with chitosan‐zinc oxide nanoparticles combined with flotation‐assisted dispersive liquid–liquid microextraction for the determination of 13 n‐alkanes in soil samples

In this study, chitosan‐zinc oxide nanoparticles were used as a sorbent of miniaturized matrix solid‐phase dispersion combined with flotation‐assisted dispersive liquid–liquid microextraction for the simultaneous determination of 13 n‐alkanes such as C₈H₁₈ and C₂₀H₄₂ in soil samples. The solid samples were directly blended with the chitosan nanoparticles in the solid‐phase dispersion method. The eluent of solid‐phase dispersion was applied as the dispersive solvent for the following flotation‐assisted dispersive liquid–liquid microextraction for further purification and enrichment of the target compounds prior to gas chromatography with flame ionization detection. Under the optimum conditions, good linearity with correlation coefficients in the range 0.9991 < r² < 0.9995 and low detection limits between 0.08 to 2.5 ng/g were achieved. The presented procedure combined the advantages of chitosan‐zinc oxide nanoparticles, solid‐phase dispersion and flotation‐assisted dispersive liquid–liquid microextraction, and could be applied for the determination of n‐alkanes in complicated soil samples with acceptable recoveries.     

Photoionization and Pyrolysis of a 1,4‐Azaborinine: Retro‐Hydroboration in the Cation and Identification of Novel Organoboron Ring Systems

The photoionization and dissociative photoionization of 1,4‐di‐tert‐butyl‐1,4‐azaborinine by means of synchrotron radiation and threshold photoelectron photoion coincidence spectroscopy is reported. The ionization energy of the compound was determined to be 7.89 eV. Several low‐lying electronically excited states in the cation were identified. The various pathways for dissociative photoionization were modeled by statistical theory, and appearance energies AE_0K were obtained. The loss of isobutene in a retro‐hydroboration reaction is the dominant pathway, which proceeds with a reverse barrier. Pyrolysis of the parent compound in a chemical reactor leads to the generation of several yet unobserved boron compounds. The ionization energies of the C₄H₆BN isomers 1,2‐ and 1,4‐dihydro‐1,4‐azaborinine and the C₃H₆BN isomer 1,2‐dihydro‐1,3‐azaborole were determined from threshold photoelectron spectra.     

Additional insights from very‐high‐resolution 13C NMR spectra of long‐chain n‐alkanes

New information has been obtained from very‐high‐resolution ¹³C NMR studies of a series of long‐chain n‐alkanes. These compounds are fundamentally important in the petroleum industry and are essential to the life of some plants, flowers, and insects. At least partial resolution of the ten different ¹³C NMR signals of n‐C₂₀H₄₂ is observed at 11.7 T for solutions in C₆D₆ or C₆D₅CD₃. A ¹³C T₁ inversion‐recovery experiment provides much more detailed information than in previous studies of long‐chain n‐alkanes, demonstrates a steady increase in the relaxation times of the ten different carbons proceeding from the middle to the end of the chain because of segmental motion, and thus confirms the assignments for the interior carbons. In contrast, there is significant overlap for the signals for C‐7 and the more interior carbons in a solution of n‐C₁₆ or longer chain alkanes in CDCl₃. Not only are the chemical shifts sensitive to the solvent used, but also the relative chemical shifts change. Signals for the interior carbons of the odd‐number alkanes in CDCl₃ are better resolved than in the spectra of their even‐number counterparts. Some mixed aromatic solvent systems give increased dispersion of the cluster of C‐6 through C‐10 signals of n‐C₂₀H₄₂, n‐C₂₁H₄₄, and n‐C₂₂H₄₆. However, none of the solvents used could even partially resolve the C‐10 and C‐11 signals of n‐C₂₁H₄₄ or n‐C₂₂H₄₆ at 11.7 T, which may result from a different distribution of conformers for n‐C₂₁H₄₄ or n‐C₂₂H₄₆ than for n‐C₂₀H₄₂ and shorter n‐alkanes. Copyright © 2013 John Wiley & Sons, Ltd.     

Hetero‐π‐systems from 2 + 2 cycloreversion,part 2.1Ab initio thermochemical study of heterocyclobutanes 2 + 2 cycloreversion to form heteroethenes H2C=X (X=NH,O, SiH2, PH,S)

Ab initio and DFT thermochemical study of diradical mechanism of 2 + 2 cycloreversion of parent heterocyclobutanes and 1,3‐diheterocyclobutanes, cyclo‐(CH₂CH₂CH₂X), and cyclo‐(CH₂XCH₂X), where X = NH, O, SiH₂, PH, S, was undertaken by calculating closed‐shell singlet molecules at three levels of theory: MP4/6‐311G(d)//MP2/6‐31G(d)+ZPE, MP4/6‐311G(d,p)//MP2/6‐31G (d,p)+ZPE, and B3LYP/6‐311+G(d,p)+ZPE. The enthalpies of 2 + 2 cycloreversion decrease on going from group 14 to group 16 elements, being substantially higher for the second row elements. Normally endothermic 2 + 2 cycloreversion is predicted to be exothermic for 1,3‐diazetidine and 1,3‐dioxtane. Strain energies of the four‐membered rings were calculated via the appropriate homodesmic reactions. The enthalpies of ring opening via the every possible one‐bond homolysis that results in the formation of the corresponding 1,4‐diradical were found by subtracting the strain energies from the central bond dissociation energies of the heterobutanes CH₃CH₂—CH₂XH, CH₃CH₂—XCH₃, and HXCH₂—XCH₃. The latter energies were determined via the enthalpies of the appropriate dehydrocondensation reactions, using C—H and X—H bond energies in CH₃XH calculated at G2 level of theory. Except 1,3‐disiletane, in which ring‐opening enthalpy attains 69.7 kcal/mol, the enthalpies of the most economical ring openings do not exceed 60.7 kcal/mol. The 1,4‐diradical decomposition enthalpies found as differences between 2 + 2 cycloreversion and ring‐opening enthalpies were negative, the least exothermicity was calculated for ⋅ CH₂SiH₂CH₂CH₂. The only exception was 1,3‐disiletane, which being diradical, CH₂SiH₂CH₂SiH₂, decomposed endothermically. Since decomposition of the diradical containing two silicon atoms required extra energy, raising the enthalpy of the overall reaction to 78.9 kcal/mol, 1,3‐disiletane was predicted to be highly resisting to 2 + 2 cycloreversion. © 2007 Wiley Periodicals, Inc. Heteroatom Chem 18:704–720, 2007; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/hc.20377     

Investigation on the absolute and relative photoionization cross sections of 3 potential propargylic fuels

Absolute photoionization cross sections for 2 potential propargylic fuels (propargylamine and dipropargyl ether) along with the partial ionization cross sections for their dissociative fragments are measured and presented for the first time via synchrotron photoionization mass spectrometry. The experimental setup consists of a multiplexed orthogonal time‐of‐flight mass spectrometer and is located at the Advanced Light Source facility of the Lawrence Berkeley National Laboratory in Berkeley, California. Data for a third propargylic compound (propargyl alcohol) were taken; however, because of its low signal, due to its weakly bound cation, only the dissociative ionization fragment from the H‐loss channel is observed and presented. Suggested pathways leading to formation of dissociative photoionization fragments along with CBS‐QB3 calculated adiabatic ionization energies and appearance energies for the dissociative fragments are also presented.     

Rapid structural determination of alkaloids in a crude extract of Stemona saxorum by high‐performance liquid chromatography/electrospray ionization coupled with tandem mass spectrometry

The electrospray ionization (ESI) mass spectrometric behavior of five Stemona alkaloids, stemokerrin, oxystemokerrin, oxystemokerrilactone, oxystemokerrin N‐oxide and stemokerrin N‐oxide, was studied using an ESI tandem mass technique (MSⁿ). These compounds, isolated from Stemona saxorum endemic in Vietnam, represent a class of alkaloids containing a pyrido[1,2‐a]azepine A,B‐ring core with a 1‐hydroxypropyl side chain attached to C‐4. Their fragmentation pathways were elucidated by ESI‐MSⁿ results and the elemental composition of the major product ions was confirmed by accurate mass measurement. In order to rationalize some fragmentation pathways, the relative Gibbs free energies of some product ions were estimated using the B3LYP/6‐31+G(d) method. Based on the ESI‐MSⁿ results of five reference compounds, a reversed‐phase high‐performance liquid chromatography with tandem mass spectrometry (RP‐HPLC/MSⁿ) method was developed for the characterization of Stemona alkaloids with a pyrido[1,2‐a]azepine A,B‐ring core from the extract of S. saxorum. A total of 41 components were rapidly identified or tentatively characterized, of which 12 compounds were identified as Stemona alkaloids with a pyrido[1,2‐a]azepine A,B‐ring core, including four new compounds. This method is convenient and sensitive, especially for minor components in complex natural product extracts. Copyright © 2009 John Wiley & Sons, Ltd.     

Excited state properties,fluorescence energies,and lifetimes of a poly(fluorene‐phenylene), based on TD‐DFT investigation

The structural and electronic properties of fluorene‐phenylene copolymer (FP)_n, n = 1–4 were studied by means of quantum chemical calculations based on density functional theory (DFT) and time dependent density functional theory (TD‐DFT) using B3LYP functional. Geometry optimizations of these oligomers were performed for the ground state and the lowest singlet excited state. It was found that (FP)_n is nonplanar in its ground state while the electronic excitations lead to planarity in its S₁ state. Absorption and fluorescence energies were calculated using TD‐B3LYP/SVP and TD‐B3LYP/SVP+ methods. Vertical excitation energies and fluorescence energies were obtained by extrapolating these values to infinite chain length, resulting in extrapolated values for vertical excitation energy of 2.89 and 2.87 eV, respectively. The S₁ ← S₀ electronic excitation is characterized as a highest occupied molecular orbital to lowest unoccupied molecular orbital transition and is distinguishing in terms of oscillator strength. Fluorescence energies of (FP)_n calculated from TD‐B3LYP/SVP and TD‐B3LYP/SVP+ methods are 2.27 and 2.26 eV, respectively. Radiative lifetimes are predicted to be 0.55 and 0.51 ns for TD‐B3LYP/SVP and TD‐B3LYP/SVP+ calculations, respectively. These fundamental information are valuable data in designing and making of promising materials for LED materials. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2010     

Theoretical study of 3d‐metal mononitrides using DFT method

3d‐Metal mononitrides are studied using the density functional theory method. The lowest spin state for these dimers is obtained using the B3LYP hybrid functional with the 6‐311+G* basis set. The equilibrium geometries, vibrational frequencies, binding energies, Mulliken, and natural orbital population analysis charges, natural orbital electronic configuration, electron affinity, and ionization potential are obtained. Mulliken as well as natural orbital population analysis charges indicate that for all dimers, in cations most of the positive charge localized on the transition metal atom where in anions most of the negative charge localized on nitrogen atom. The binding energies for 3d‐metal mononitrides are higher than those for monocarbides and monoxides. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

Peptide models XXXI. Conformational properties of hydrophobic residues shaping the core of proteins. An ab initio study of N‐formyl‐L‐valinamide and N‐formyl‐L‐phenylalaninamide

Employing introductory (3‐21G RHF) and medium‐size (6‐311++G** B3LYP) ab initio calculations, complete conformational libraries, containing as many as 27 conformers, have been determined for diamide model systems incorporating the amino acids valine (Val) and phenylalanine (Phe). Conformational and energetic properties of these libraries were analyzed. For example, significant correlation was found between relative energies from 6‐311++G** B3LYP and single‐point B3LYP/6‐311++G**//RHF/3‐21G calculations. Comparison of populations of molecular conformations of hydrophobic aromatic and nonaromatic residues, based on their ab initiorelative energies, with their natural abundance indicates that, at least for the hydrophobic core of proteins, the conformations of Val (Ile, Leu) and Phe (Tyr, Trp) are controlled by the local energetic preferences of the respective amino acids. © 2001 John Wiley & Sons, Inc. J Comput Chem 22: 732–751, 2001     

Production of hyperlithiated Li2F by a laser ablation of LiF–Li3N mixture

Lithium-excess binary clusters Li_nF_n−1 (n=2–9) were detected by photoionization time-of-flight mass spectrometry in a supersonic cluster beam generated by a laser ablation of a solid mixture of lithium fluoride and nitride. Laser power dependence of the Li₂F⁺ signal intensity has indicated that the ionization energy of the hyperlithiated Li₂F molecule is lower than 4.66 eV. The theoretical vertical ionization energy obtained by the CCSD(T)/6-311+G(d)//B3LYP/6-311+G(d) calculations are 4.47 eV. No nitrogen-containing clusters were detected. The absence of Li₄N is ascribed to the exothermicity of the reaction, 2Li₃N→N₂+Li₆.     

Calculation of Ionization,Excitation and Electron Capture Cross Sections for Be4++H(2s, 2p) Collisions

A computational study of Be⁴⁺+H(2s, 2p) collisions has been carried out employing the Classical Trajectory Monte Carlo (CTMC) method for the impact energy range from 20 keV/u to 1000 keV/u. The integral n partial cross sections for H(n) excitation and Be³⁺(n) electron capture and, the total ionization and electron capture cross sections are calculated and compared to recent semiclassical results. A general good agreement is observed for the n partial and total electron capture and ionization cross sections. The comparative study of the three inelastic processes show no significant differences between both excited targets.     

Understanding the Initial Decomposition Pathways of the n‐Alkane/Nitroalkane Binary Mixture

Addition of nitroalkanes into n‐alkanes can lower the activation barriers of free‐radical production and accelerate the decomposition of n‐alkanes at relatively low temperatures. Four initial decomposition mechanisms of the n‐butane/nitroethane binary mixture were proposed for the promoting effect and considered theoretically at the B3LYP, BB1K, BMK, MPW1K, and M06‐2X levels with MG3S basis set. Energetics above was compared to high‐level CBS‐QB3 and G4 calculations. Calculated results confirm the feasibility of the four initial decomposition pathways: (I) the C? NO₂ bond rupture of nitroethane to produce ethyl and ·NO₂, (II) HONO elimination from nitroethane followed by decomposition to ·OH and ·NO, (III) rearrangement of nitroethane to ethyl nitrite which further dissociates into CH₃CH₂O· and ·NO, and (IV) direct hydrogen‐abstraction of nitroethane with n‐butane.     

Evaluation of exchange‐correlation functionals in comparison to B3LYP for the description of silicon and Cu‐doped silicon clusters

Several developed exchange‐correlation functionals in density functional theory have been systematically applied to describe the geometries and electronic properties of small silicon (Si_n+1, n < 5) and doped silicon (CuSi_n) clusters. The performance of the various approaches is done with their critical comparison with B3LYP and available high level wave function methods. Our calculations indicate that all functional give reasonable results. Further, OLYP/6‐311+G* approach generally agrees with B3LYP results. The good performance of OLYP is of significant interest knowing that the hybrid functionals are computationally more demanding than nonhybrid schemes. So, we recommend OLYP/6‐311+G* approach for studying the doped silicon clusters and understanding the electronic properties of silicon by the presence of doped metal impurities. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

On the Gas‐Phase Reactivity of Complexed OH+ with Halogenated Alkanes

OH⁺ is an extraordinarily strong oxidant. Complexed forms (L? OH⁺), such as H₂OOH⁺, H₃NOH⁺, or iron–porphyrin‐OH⁺ are the anticipated oxidants in many chemical reactions. While these molecules are typically not stable in solution, their isolation can be achieved in the gas phase. We report a systematic survey of the influence on L on the reactivity of L? OH⁺ towards alkanes and halogenated alkanes, showing the tremendous influence of L on the reactivity of L? OH⁺. With the help of with quantum chemical calculations, detailed mechanistic insights on these very general reactions are gained. The gas‐phase pseudo‐first‐order reaction rates of H₂OOH⁺, H₃NOH⁺, and protonated 4‐picoline‐N‐oxide towards isobutane and different halogenated alkanes C_nH_2n+1Cl (n=1–4), HCF₃, CF₄, and CF₂Cl₂ have been determined by means of Fourier transform ion cyclotron resonance meaurements. Reaction rates for H₂OOH⁺ are generally fast (7.2×10^?10–3.0×10^?9 cm³ mol^?1 s^?1) and only in the cases HCF₃ and CF₄ no reactivity is observed. In contrast to this H₃NOH⁺ only reacts with tC₄H₉Cl (k_obs=9.2×10^?10), while 4‐CH₃‐C₅H₄N‐OH⁺ is completely unreactive. While H₂OOH⁺ oxidizes alkanes by an initial hydride abstraction upon formation of a carbocation, it reacts with halogenated alkanes at the chlorine atom. Two mechanistic scenarios, namely oxidation at the halogen atom or proton transfer are found. Accurate proton affinities for HOOH, NH₂OH, a series of alkanes C_nH_2n+2 (n=1–4), and halogenated alkanes C_nH_2n+1Cl (n=1–4), HCF₃, CF₄, and CF₂Cl₂, were calculated by using the G3 method and are in excellent agreement with experimental values, where available. The G3 enthalpies of reaction are also consistent with the observed products. The tendency for oxidation of alkanes by hydride abstraction is expressed in terms of G3 hydride affinities of the corresponding cationic products C_nH_2n+1⁺ (n=1–4) and C_nH_2nCl⁺ (n=1–4). The hypersurface for the reaction of H₂OOH⁺ with CH₃Cl and C₂H₅Cl was calculated at the B3 LYP, MP2, and G3_m* level, underlining the three mechanistic scenarios in which the reaction is either induced by oxidation at the hydrogen or the halogen atom, or by proton transfer.     

[2+4] and [2+2] Cycloaddition Reactions of N‐Sulfinyl Carboxylic Acid Amides with (CF3)2BNMe2. Crystal Structure of cyclo‐(CF3)2B‐NMe2‐S(=O)‐N=C(p‐CH3C6H4)‐O

N‐sulfinylacylamides R‐C(=O)‐N=S=O react with (CF₃)₂BNMe₂ ( 1 ) to form, by [2+4] cycloaddition, six‐membered rings cyclo‐(CF₃)₂B‐NMe₂‐S(=O)‐N=C(R)‐O for R = Me ( 2 ), t‐Bu ( 3 ), C₆H₅ ( 4 ), and p‐CH₃C₆H₄ ( 5 ) while N‐sulfinylcarbamic acid esters R‐O‐C(=O)‐N=S=O react with 1 to yield mixtures of six‐membered (cyclo‐(CF₃)₂B‐NMe₂‐S(=O)‐N=C(OR)‐O) and four‐membered rings (cyclo‐(CF₃)₂B‐NMe₂‐S(=O)‐N(C=O)OR) for R = Me ( 6 and 9 ), Et ( 7 and 10 ), and C₆H₅ ( 8 and 11 ). The structure of 5 has been determined by X‐ray diffraction.     

Ambient ionization and direct identification of volatile organic compounds with microwave‐induced plasma mass spectrometry

An innovative method of volatile organic compounds analysis by using microwave‐induced plasma ionization (MIPI) source in combination with an ambient ion trap mass spectrometer is presented here. Using MIPI for direct sample vapor, analysis was achieved without any sample preparation or subsequent heating. The relative abundance of the target compounds can be obtained almost instantly within a few seconds. The ionization processes of different volatile compounds was optimized, and the limits of detection were identified in the range of 0.15–4.5 pptv or 0.73–8.80 pg ml^?1. The relative standard deviation (RSD) is in the range of 4–14%, while correlation coefficients of the working curves (R²) are better than 0.98. The new method possesses advantages of ease operation, time‐saving, high sensitivity and inexpensive setup. In addition, the ionization processes of short n‐alkane chains were investigated with the MIPI technique, and a unique [M + 13]⁺ was detected, which has not been reported in detail by any other related ionization techniques. An ionization mechanism was proposed on the basis of the experimental results obtained in this work and available information in literatures, in which the n‐alkanes in the plasma environment possibly generate protonated cyclopentadiene [M – 5]⁺ or alkyl‐substituted analogues as well as hydrous ions [M + 13]⁺ and [M + 13 + 18]⁺, as shown in Scheme 1 in the main text. Copyright © 2015 John Wiley & Sons, Ltd.