Isolation and characterization of conformational isomers of N,N′‐bis(3,5‐dichlorosalicylidene)‐2,2′‐ethylenedianiline: crystal structure,photoluminescence, and density functional theory calculation

We have isolated two isomeric solids 1 and 2 of N,N′‐bis(3,5‐dichlorosalicylidene)‐2,2′‐ethylenedianiline and characterized by IR, UV/Vis, X‐ray powder diffraction, thermogravimetric analysis/differential thermal analysis, and X‐ray crystallography. Although the solids are same formulas, each shows different colors and crystal structures. Orange solid ( 1 ) shows endo conformation while yellow solid ( 2 ) exhibits exo form depending on packing modes. UV/Vis spectra of 1 and 2 appear very similar patterns in the solid state; however, the bands of 1 are slightly red‐shifted compared with those of 2 . 1 displays a strong fluorescent emission band at ~582 nm while 2 shows an intense fluorescent signal at ~563 nm. The charge density populations of 1 and 2 have been studied by computational simulations using density functional theory at pbe1pbe/6‐311G** level. The calculated highest occupied molecular orbital and lowest unoccupied molecular orbital energies of 1 and 2 confirm that charge transfer occurs within the organic molecules. The energy difference of HOMO‐LUMO in 1 is smaller slightly than that of 2 about 0.05 eV (~17 nm). Copyright © 2014 John Wiley & Sons, Ltd.     

Electrochemical,ESR and quantum chemical study of 1‐substituted naphthalenes and their radical anions

Electrochemical reduction and oxidation of a series of 1‐substituted naphthalenes (1‐X‐naphthalenes) have been studied by the method of cyclic voltammetry (CV). The first reduction peak of the majority of these compounds corresponds to a one‐electron transfer to form the relatively stable radical anion (RA). For these species, ESR spectra have been registered and interpreted, the life time has been estimated. The first oxidation peaks of 1‐X‐naphthalenes are irreversible and correspond to a transfer of two or more electrons. Copyright © 2007 John Wiley & Sons, Ltd.     

Theoretical studies on aromaticity of selected hydroxypyrones and their cations and anions. Part 2. Electron delocalisation in the OCCO group

Electron delocalisation in the OCCO part of hydroxypyrones with two exocyclic oxygens linked by two carbon atoms was studied using well‐known aromaticity indices like: HOMA, EN, GEO, NICS(0) and NICS(1). This part of hydroxypyrones is very important due to the fact that the two exocyclic oxygens of deprotonated hydroxypyrone units are responsible for metal ion binding. Values of the aromaticity indices were obtained for geometries calculated by several theoretical methods (HF, SVWN, B3LYP and B1LYP) with 6‐311 ++ G(d,p) basis set. Electron delocalisation in the corresponding cations and anions was also considered. The data obtained in this work revealed that the relative delocalisation order in the OCCO group is the same as the aromaticity order determined earlier for the heterocyclic rings of hydroxypyrones (anions < neutral molecule < cation). The problem of quasiaromaticity in neutral hydroxypyrones and their cations is also considered and discussed. Copyright © 2008 John Wiley & Sons, Ltd.     

Electrochemical properties and radical anions of carbocycle‐fluorinated quinoxalines and their substituted derivatives

Electrochemical reduction (ECR) and oxidation (ECO) of 5,6,7,8‐tetrafluoroquinoxaline ( 1 ) and its derivatives bearing various substituents R (7‐H ( 2 ), 7,8‐H₂ (3 ), 6‐CF₃ ( 4 ), 6‐Cl ( 5 ), 5,7‐Cl₂ ( 6 ), 5‐NH₂ ( 7 ), 6‐OCH₃ ( 8 ), 6,7‐(OCH₃)₂ ( 9 ), 6,7,8‐(OCH₃)₃ ( 10 ), 5,6,7,8‐(OCH₃)₄ ( 11 ), 6‐OCH₃,7‐N(CH₃)₂ ( 12 ), 6‐N(CH₃)₂ ( 13 ), 6,7‐(N(CH₃)₂)₂ ( 14 ), 5,6,7‐(N(CH₃)₂)₃ ( 15 ), and 7,8‐cyclo‐(=CF‐CF = CF‐CF=) ( 16 )) in the carbocycle have been studied by cyclic voltammetry in MeCN. For 1 – 4 and 7 – 15 , the first reduction peaks have been found to be 1‐electron and reversible, thus corresponding to the formation of their radical anions (RAs), which are long lived at 295 K except those of 4 – 6 and 15 , 16 . Irreversible hydrodechlorination has been observed for 5 and 6 at the first step of their ECR confirmed by EPR detection of corresponding RAs of 2 and 5,7‐H₂ derivative of 1 ( 17 ) at the next steps. Electrochemically generated RAs of 1 – 3 , 7 – 14 , and 17 have been characterized in MeCN by EPR spectroscopy together with DFT calculations at the (U)B3LYP/6‐31 + G(d) level of theory using PCM to describe the solvent. A noticeable alternation of spin density on the –NCCN– moiety of quinoxaline has been observed for all RAs possessing R‐substitution asymmetry. The comparative electron‐accepting ability of 1 – 15 has been analyzed in terms of their experimental reduction peak potentials and the (U)B3LYP/6‐31 + G(d)‐calculated gas‐phase first adiabatic electron affinities (EAs). The differences in electron transfer solvation energies for 1 – 15 have been evaluated on the basis of ECR peaks' potentials and calculated gas‐phase EAs. The ECO of 1 – 5 and 7 – 14 has been found to be irreversible.     

GIAO/DFT calculations of relative conformer energies and 1H NMR shifts of unsaturated alcohols in benzene

Density functional theory calculations were performed on alkenols and alkynols at the PBE1PBE/6‐311 + G(d,p) level with the inclusion of solvent (benzene) effects by the integral‐equation‐formalism polarizable continuum model (IEFPCM). For the smaller molecules, conformers in which the OH group is in the vicinity of the double or triple bond are preferred, but this preference falls as the alkyl chain is lengthened. The solvent effect on the relative Gibbs energies of different conformers is irregular, and in only two cases, 3‐buten‐1‐ol and 3‐butyn‐1‐ol, is there marked levelling. Gauge‐including atomic orbital calculations, based on the PBE1PBE/6‐311 + G(d,p) geometries but using a larger basis set, cc‐pVTZ, give nuclear magnetic resonance shifts for all the protons in each conformer. Overall shifts are calculated by weighing these according to the conformer population. Calculated values are well correlated with experimental data from high‐dilution spectra in the same solvent, ranging from about 0.4 to 5.8 ppm, with a slope of 1.09 ± 0.01. Calculations on some alcohols with hetero‐atom substituents confirm that these also prefer gauche (synclinal) conformers in the gas phase, with a less marked preference in benzene. The nuclear magnetic resonance shifts, however, are calculated to be on average over 0.8 ppm higher than observed. Copyright © 2011 John Wiley & Sons, Ltd.     

Thermal reaction of electron deficient 4‐oxo‐4H‐pyrazole 1,2‐dioxide with cycloheptatriene: the first examples of the formation of an endo‐[4π + 6π]‐cycloadduct and an intramolecular 1,3‐dipolar reaction leading to a heterocage

The reaction of 3,5‐bis(methoxycarbonyl)‐4‐oxo‐4H‐pyrazole 1,2‐dioxide (1a) with 1,3,5‐cycloheptatriene (2b) gave a mixture of the novel endo‐[4 + 6]‐cycloadduct (4ab), anti‐exo‐[4 + 2]‐cycloadduct (5ab), and the heterocage (6ab) derived from the intramolecular 1,3‐dipolar cycloaddition reaction of the syn‐endo‐[4 + 2]‐cycloadduct. Analogous endo‐[4 + 6] selectivity in 1,3‐dipolar cycloadditions has not been reported previously. The X‐ray analysis indicates that 6ab has a very long N_sp3–N_sp3 bond distance of 1.617(4) Å. The cycloaddition behaviour is discussed on the basis of transition‐state structures optimized at the B3LYP/6‐31G(d) level of theory, from which predictions of the peri‐, regio‐, and stereoselectivities agreed well with the experimental results. Copyright © 2012 John Wiley & Sons, Ltd.     

Kinetics and thermochemistry of the unusual [2π + 2σ + 2σ]‐cycloaddition of quadricyclane with some dienophiles

Kinetic parameters of the unusual [2π + 2σ + 2σ]‐cycloaddition reactions of quadricyclane ( 1 ) with tetracyanoethylene ( 2 ), 4‐phenyl‐1,2,4‐triazoline‐3,5‐dione ( 3 ), N‐phenylmaleimide ( 4 ), and diethyl azodicarboxylate ( 5 ) are determined experimentally. Additionally, the enthalpies of 1  +  2 reaction in 1,4‐dioxane solution (?236.6 ± 1.0 kJ mol^?1) and 1  +  3 reaction in toluene (?255.0 ± 2.8 kJ mol^?1) are determined calorimetrically and shown to be the largest in absolute magnitude among all known cycloaddition reactions involving these dienophiles. Solvent effect on the rate of 1 + 3 reaction in 11 solvents is studied and found to be moderate and similar to that of the conventional Diels‐Alder and ene reactions. The difference in the reaction rate constants of 1 with different dienophiles can be up to 9 orders of magnitude and is mainly caused by the difference in activation enthalpies. This difference is not correlated with the standard enthalpies of reactions and is likely the result of high sensitivity of the [2π + 2σ + 2σ] reaction rates to the energy of donor‐acceptor interactions between the reactants.     

Prototropy and π‐electron delocalization for purine and its radical ions – DFT studies

Complete tautomeric equilibria and π‐electron delocalization were studied at the B3LYP/6‐311+G** level for neutral purine ( P ) and its charged radicals ( P ^+? and P ^??). All possible nine tautomers (four NH and five CH forms) and all possible 36 tautomeric equilibria (six NⁱH → N^kH, twenty NH → CH, and ten CⁱH → C^kH conversions) were considered. The greatest variations of the tautomeric equilibrium constants (as pK_T) were observed for the NH → CH conversions when proceeding from neutral to reduced purine ( P + e → P ^??). These variations completely change the tautomeric preferences. One‐electron oxidation ( P ? e → P ^+?) has considerably smaller effect on the pK_T values and does not change the tautomeric preferences. π‐Electron delocalization depends on the position of the moving proton and on the type of the electron transfer. For individual tautomers, some linear relations between the relative stabilities and the HOMA (harmonic oscillator model of aromaticity) indices occur for neutral and oxidized purine. For reduced purine, a scatter plot is found. Copyright © 2010 John Wiley & Sons, Ltd.     

Compounds with π(loc) → π*(deloc) electronic transitions and their solvatochromism

Molecular structures possessing atomic sites that contribute a non‐bonding electron pair to their π system (e.g. nitrogen atoms with sp² hybridization in pyrroles and anilines) usually exhibit a first absorption band whose solvatochromism is, surprisingly, sensitive only to the polarizability of the medium even though they are dipolar. As shown here, this solvatochromic behavior is a result of the first electronic transition in these compounds occurring from a substantially localized π orbital to a substantially delocalized π* orbital in the molecular structure. The high electronic delocalization present leads to a marked bathochromic band shift as the polarizability of the medium increases. It is especially relevant that this solvatochromism, which is because of the polarizability of the medium, explains the spectral shift that is only because of the redistribution of the electrons of the solvent molecules. It is important to take into account that this electronic redistribution happens instantaneously in this process. Copyright © 2015 John Wiley & Sons, Ltd.     

cis‐substituted tetraethynylporphyrin derivatives for small molecule organic solar cells

A 5,10‐Bis(phenylethynyl)‐15,20‐bis(triisopropylsilylethynyl)porphyrin (cis‐TIPSTEP) was synthesized by using phenylethynyl dipyrromethane and triisopropylsilylpropynal through scrambling of the ethynyl substituents. X‐ray crystallographic structures of cis‐TIPSTEP, 5‐phenylethynyl‐10,15,20‐tris(triisopropylsilylethynyl)porphyrin, and 5,10,15,20‐tetrakis(triisopropylsilylethynyl)porphyrin were determined in order to study the packing structure; cis‐TIPSTEP exhibited good π‐overlap and parallel π‐stacking structures. 5,10‐Bis(phenylethynyl)‐15,20‐bis(triisopropylsilylethynyl)porphyrinato magnesium (II) (Mg‐cis‐TIPSTEP) was synthesized for the use in small molecule organic solar cells, which gave power conversion efficiency of 1.5% with short‐circuit current density of 4.5 mA/cm², open‐circuit voltage of 0.83 V, and fill factor of 0.39. Copyright © 2013 John Wiley & Sons, Ltd.     

Synthesis,spatial structure and spectral properties of pyrylo‐4 (thio) squaraines variously substituted in cyclobutene moiety

Synthetic routes have been developed to a number of (thio) squaraine dyes containing the residues of CH‐acids at the central cyclobutene ring. The electronic and spatial structure as well as the chemical conversions and optical behaviour of the compounds obtained have been studied both theoretically and by X‐ray diffraction analysis, ¹H NMR and electronic spectroscopy. As shown, the electronic nature and sterical characteristics of the central ring substituents give rise to some general conformational features and crystal packing regularities and also govern the spectral position of the first π–π^* absorption band. The structure–property relationships established in the study provide guidance for the purposeful design of deeply coloured (thio) squaraines. Copyright © 2015 John Wiley & Sons, Ltd.     

Structural modifications in metal complexes of a plant metallothionein caused by reductive radical stress: a Raman study

The effect of radical stress in the biological environment is a very active field of research connecting various disciplines of life science. Thus, a comprehensive vision of all possible reactive species is necessary for contributing to the solution of puzzling questions on free radicals. In this contest, damages to Zn(II) and Cd(II) complexes of a plant metallothionein (Quercus suber—QsMT), because of reductive radical stress, were investigated by Raman spectroscopy. QsMT is a low‐molecular‐weight cysteine‐rich protein obtained by in vivo synthesis to have a physiologically representative model. Gamma‐irradiation was used to simulate the endogenous formation of reductive species. By changing the appropriate conditions of irradiation, a selection of the reacting radical species (hydrogen atom and hydrated electron) was carried out. Specific damages occur at sensitive amino acid sites, selectively, rather than indiscriminately. In particular, Cys resulted to be among the most sensitive residues toward radical attack, suggesting that the thiolate clusters of both metal and QsMTs act as efficient interceptors of reducing species. Under reductive stress, Zn–QsMT undergoes a significant thiolate group oxidation and the participation of ligands other than the cysteine‐derived thiolate bonds (i.e. His) in zinc coordination becomes necessary for the protein stabilization. Regarding Met residues, they resulted to be more sensitive to the reductive radical attack when the protein binds Cd(II) ions, indicating that the protein structure can play a significant role in blocking the ready access of free radicals to the sulfur‐containing residues, so strongly affecting the radiosensitivity of the protein. In conclusion, the results obtained from γ‐irradiation experiments indicate that reductive stress causes changes in the primary QsMT structure and in the secondary and tertiary structures, and the radical‐induced effects are dependent on the metal bound. Copyright © 2009 John Wiley & Sons, Ltd.     

Assessment of the aromaticity of borepin rings by spectroscopic,crystallographic and computational methods: a historical overview

This review presents a chronological discussion of the evolution of our conceptual and experimental understanding of aromaticity as pertaining to the borepin ring structure. Borepin is the boron‐containing charge‐neutral analogue of the carbocyclic tropylium ion, and many molecular variations involving the borepin motif have been synthesized over the past half century. The aromaticity of the borepin system has been probed with ultraviolet–visible (UV–vis), photoluminescence and infrared (IR) spectroscopy, nuclear magnetic resonance (NMR) spectroscopy, X‐ray crystallography and computational analysis. Recently, the focus of borepin‐containing compounds has shifted to π‐electron materials, building on the foundation of a firm understanding of the physical organic properties of the borepin motif that will allow for electronic fine‐tuning toward desired applications. Copyright © 2015 John Wiley & Sons, Ltd.     

Tuning the absorption spectra and nonlinear optical properties of D‐π‐A azobenzene derivatives by changing the dipole moment and conjugation length: a theoretical study

The optical properties of several azobenzene derivatives were modulated by varying the dipole moments and conjugation lengths of the D‐π‐A systems. The relationship between the structure and absorption spectrum and polarizability was studied in the gas phase, THF and MeOH solutions, respectively, by using the density functional theory. The calculated absorption spectra and second‐order polarizabilities are in good agreement with the available experimental observations. In comparison with the D‐π‐A monomer, the H‐shaped D‐π‐A dimer almost doubles the dipole moments and hence increases the second‐order polarizabilities, without a significant shift in the maximum absorption bands. The addition of another azobenzol group between electron‐donating and ‐accepting groups increases the second‐order polarizabilities by 4–6 times, but leads to an evident red‐shift of about 65–80 nm in spectra. The relative second‐order polarizability of the halogen‐substituted derivatives is in the sequence of ? CF₃ > ? F > ? Cl > ? Br, without obvious substituent effects on the optical transparency. The D‐π‐A chromophores with the strong electron‐donating (amino) and ‐accepting (acetyl) substituent present the larger second‐order polarizabilities, at the cost of about 20 nm red‐shift of the maximum absorption lengths relative to the halogen‐substituted species. It is also demonstrated that both the linear and nonlinear optical properties augment with the increase in solvent polarity, accompanied by a red‐shift in the wavelengths of maximum absorption by about 18 and 23 nm, respectively, in THF and MeOH solutions. The changes in optical properties upon the structural modifications are further rationalized by the electronic structures of various H‐shaped dimers. Copyright © 2010 John Wiley & Sons, Ltd.     

Geometry‐based analysis of azulene and azulene‐like systems with H‐ or Li‐bonding

B3LYP/6–311+G** optimization was carried out for azulene and its analogs, in which CH? CH? CH fragment was replaced with O···X···O (X = H or Li). π‐electron delocalization in four possible derivatives with H‐bonding and three possible derivatives with Li‐bonding was described by the use of HOMA index. All derivatives with Li‐bonding exhibit high π‐electron delocalization similar to that found for azulene. Among four H‐bonded systems, two exhibit lower π‐electron delocalization (HOMA < 0.39) and higher total electron energy than the other two derivatives. Copyright © 2007 John Wiley & Sons, Ltd.     

Cation sitting in aromatic cages: ab initio computational studies on tetramethylammonium–(benzene)n (n=3–4) complexes

Quantum chemistry study was performed on interaction between tetramethylammonium (TMA) and aromatic cages by means of the MP2 method to show how TMA sits in an aromatic cage that is composed of benzenes. The MP2 calculations on TMA–(benzene)_n complexes demonstrate that the more the benzene molecules in the aromatic cage, the stronger the binding strength between the cage and TMA. In details, the structure of TMA–(benzene)_n (n = 1–4) complexes can be easily constructed by superimposing n TMA‐benzene complexes via TMA, and the binding energies of the TMA–(benzene)_n complexes are the sum of the n corresponding TMA‐benzene systems. For instance, the distances between the N of TMA and the plane of the benzene ring are 4.238, 4.252, 4.264 ,and 4.276 Å, respectively, for TMA–(benzene)_n (n = 1–4) complexes, and the BSSE corrected binding energies at MP2/6‐311++G** level are ?8.8, ?17.3, ?25.8 and ?34.3 kcal/mol, respectively, for TMA– (benzene)_n (n = 1–4) complexes. Thus, this study provides us useful information on how a cation interacts with an aromatic cage in terms of complex geometry and binding strength. Copyright © 2007 John Wiley & Sons, Ltd.     

Azure A chloride: computational and spectroscopic study

Fourier transform Raman and IR as well as UV–visible spectra of the phenothiazine dye Azure A chloride, 3‐amino‐7‐(dimethylamino) phenothiazin‐5‐ium chloride were recorded and analyzed. The spectral interpretation was done following full structure optimization and vibrational wavenumber calculations based on the density functional theory (DFT) using the standard B3LYP/6‐31G(d) basis set. The N H stretching wavenumber is found to be lowered owing to intermolecular N H···S hydrogen bonding. The downshift of C H stretching wavenumber is discussed. The first hyperpolarizability of the dye is calculated. Time‐dependent density functional theory (TD‐DFT) calculations of electronic spectra were performed on the optimized structure and compared with the experimental UV–visible spectrum. The atomic net charges of the molecule reveal the  M effect of the nitrogen atoms in the molecule. Stability of the molecule arising from hyperconjugative interactions leading to its nonlinearity and bioactivity, charge delocalization and mesomeric effects have been analyzed using natural bond orbital (NBO) analysis. Copyright © 2008 John Wiley & Sons, Ltd.     

FT‐Raman,IR and UV‐visible spectral investigations and ab initio computations of a nonlinear food dye amaranth

Amaranth (E123, Food Red 9, FD & C Red 2) is a sulfonated azo dye used as a color additive in foodstuffs, pharmaceuticals and cosmetics. FT‐IR and FT‐Raman spectra of amaranth were recorded and analyzed. Density functional theory (DFT) calculations were performed to derive the equilibrium geometry, vibrational wavenumbers, intensities and first hyperpolarizability. The results of the optimized molecular structure gave clear evidence for the intramolecular charge transfer (ICT) and intramolecular hydrogen bonding in the molecule. Azo stretching wavenumbers are lowered owing to conjugation and π‐electron delocalization. Time‐dependent density functional theory (TD‐DFT) calculations of the electronic spectra were performed on the optimized structure and compared with the experimental UV‐visible spectrum. Vibrational spectra, natural bonding orbitals (NBO) analysis and optimized geometry indicate C H·N hydrogen bonding in the molecule. The first hyperpolarizability of the molecule was calculated. The optical nonlinearity of the dye is due to the donation of the electron density from the hydroxyl group of the conjugated system via naphthalene ( 2 ) ring into π*‐orbital of the azo moiety. Copyright © 2008 John Wiley & Sons, Ltd.     

Solvatochromic properties of long alkyl chain π* indicators: comparison of N,N‐dialkyl‐4‐nitroanilines and alkyl 4‐nitrophenyl ethers

Hydrophobic forms of the N,N‐dialkyl‐4‐nitroaniline (DNAP) (p‐O₂NC₆H₄NR₂) ( 1a–f ) and alkyl‐4‐nitrophenyl ether (p‐O₂NC₆H₄OR) ( 2a–c ) solvatochromic π* indicators have been characterized and compared with respect to: (a) solvatochromic bandshape, (b) sensitivity expressed as ?s , ( / d π * ), and (c) trends in ? s with increasing length of alkyl chain(s) on the probe molecule. ? Octyl 4‐nitrophenyl ether (p‐O₂NC₆H₄OC₈H₁₇) ( 2b ) and ? decyl 4‐nitrophenyl ether (p‐O₂N C₆H₄ OC₁₀H₂₁) ( 2c ) were synthesized and their solvatochromic UV/Vis absorption bands were found to maintain a Gausso‐Lorentzian bandshape for the indicators in non‐polar and alkyl substituted aromatic solvents, for example, hexane(s) and mesitylene. Corresponding absorption bands for 1a–f display increasing deviation from a Gausso‐Lorentzian shape in the same solvents as the alkyl chains on the indicator are increased in length all the way to C₁₀ and C₁₂, for example, N,N‐didecyl‐4‐nitroaniline (p‐O₂NC₆H₄N (C₁₀H₂₁)₂) and N,N‐didodecyl‐4‐nitroaniline (p‐O₂NC₆H₄N (C₁₂H₂₅)₂) ( 1d–f ). A plot of ? s versus C_n follows a 1st order decay for the DNAP indicators but is linear for the alkyl 4‐nitrophenyl ethers. A discussion of how the long alkyl chains on the two types of indicators affect the orientation and overlap of n and π * orbitals, and resulting solvatochromic bands is presented. For DNAP, overextending the alkyl chains to obtain greater hydrophobic character may cause the alkane component to dominate solute‐solvation processes at the expense of the probe's fundamental solvatochromic character. Copyright © 2007 John Wiley & Sons, Ltd.