Biosynthesis of polyunsaturated short chain aldehydes in the diatom Thalassiosira rotula

The diatom Thalassiosira rotula releases polyunsaturated short chain aldehydes (PUA) such as 2E,4Z,7-octatrienal (7a) and 2E,4Z,7Z-decatrienal (3a) upon wounding. Using labeling experiments and synthetic standards, we demonstrate that the mechanism of fatty acid transformation does not follow established lipoxygenase/hydroperoxide lyase pathways known from higher plants or mammals but rather relies on a unique transformation of polyunsaturated hydroperoxy fatty acids. These intermediates are transformed to PUA and short chain hydroxylated fatty acids, which are novel oxylipins. [reaction: see text]     

Comparative evaluation of xerogel-based activated carbons synthesized from aliphatic aldehydes of different chain lengths

This work deals with examining the performance of xerogel-based activated carbons (XACs), which were synthesized from aliphatic aldehydes of different carbon chain lengths. These XACs were compared with those synthesized from commonly synthesized XACs. The performance of the new xerogels was determined by examining the thermo-gravimetric analysis (TGA) and Fourier transform infrared (FTIR); however, the XACs were studied using infrared spectra (IR), scanning electron microscopy (SEM), and their adsorption capacities in gas and aqueous media (nitrogen adsorption, iodine number, adsorption of phenol and methylene blue, MB). The adsorption behavior of these investigated XACs to MB was studied in detail, using the Langmuir and Freundlich adsorption equations, in addition to kinetic (Lagergren first-order and pseudo-second-order) and thermodynamic models. The results show that long -chain aldehydes have a significant effect on increasing the total pore volume (V_T). Glutaraldehyde-based carbon xerogel is recommended as an economically superior adsorbent with an S_BET x yield of 571.9 m²/g. XACs from glutaraldehyde and propionaldehyde have higher surface area than commonly synthesized ACs from formaldehyde (F), Phenol/F, Tanin/F-, Polybenzooxazine/F, and Pyrogallol/F. The best models used for MB adsorption onto XACs are Langmuir and pseudo-second-order kinetic equations. The negative values of thermodynamic parameter ΔGº and positive values of ΔHº indicate the MB adsorption process is spontaneous and endothermic.     

Automated headspace solid-phase dynamic extraction to analyse the volatile fraction of food matrices

High concentration capacity headspace techniques (headspace solid-phase microextraction (HS-SPME) and headspace sorptive extraction (HSSE)) are a bridge between static and dynamic headspace, since they give high concentration factors as does dynamic headspace (D-HS), and are as easy to apply and as reproducible as static headspace (S-HS). In 2000, Chromtech (Idstein, Germany) introduced an inside-needle technique for vapour and liquid sampling, solid-phase dynamic extraction (SPDE), also known as "the magic needle". In SPDE, analytes are concentrated on a 50 microm film of polydimethylsiloxane (PDMS) and activated carbon (10%) coated onto the inside wall of the stainless steel needle (5 cm) of a 2.5 ml gas tight syringe. When SPDE is used for headspace sampling (HS-SPDE), a fixed volume of the headspace of the sample under investigation is sucked up an appropriate number of times with the gas tight syringe and an analyte amount suitable for a reliable GC or GC-MS analysis accumulates in the polymer coating the needle wall. This article describes the preliminary results of both a study on the optimisation of sampling parameters conditioning HS-SPDE recovery, through the analysis of a standard mixture of highly volatile compounds (beta-pinene, isoamyl acetate and linalool) and of the HS-SPDE-GC-MS analyses of aromatic plants and food matrices. This study shows that HS-SPDE is a successful technique for HS-sampling with high concentration capability, good repeatability and intermediate precision, also when it is compared to HS-SPME.     

Identification of halocarbons in the Tiber and Marta rivers by static headspace and liquid–liquid extraction analysis

Volatile organochlorine compounds in the Tiber and Marta rivers have been analyzed by liquid–liquid extraction and headspace gas chromatography. Several different halogenated compounds were identified, in particular chloroform, bromoform, trichloroethane, trichloroethene, and tetrachloroethene. The concentrations of the halocarbons varied between 0.05 and 4.5 μg L^–1 with a relative standard deviation ≤4.0%. The highest concentrations were observed for chloroform, bromoform, and tetrachloroethene in the Marta and Tiber rivers. The results obtained by use of the two analytical methods were similar.     

Development of a headspace solid-phase microextraction-gas chromatography-mass spectrometry method for the identification of odour-causing volatile compounds in packaging materials

A method for the identification of volatile organic compounds in packaging materials is presented in this study. These compounds are formed by thermooxidative degradation during the extrusion coating process in the manufacture of packaging. Headspace solid-phase microextraction (HS-SPME) was used as sample preparation technique prior to the determination of the volatile organic compounds by gas chromatography-mass spectrometry (GC-MS). The effects of extraction variables, such as the type of fibre, the incubation temperature, the pre-incubation time, the size of the vial and the extraction time on the amounts of the extracted volatile compounds were studied. The optimal conditions were found to be: carboxen-polydimethylsiloxane 75 microm fibre, 5 min of pre-incubation time, 100 degrees C of incubation temperature, 20-ml vial, and 15 min of extraction time. The chromatograms obtained by HS-SPME and static headspace extraction were compared in order to show that the HS-SPME method surpasses the static headspace method in terms of sensitivity. Twenty-five compounds were identified including carbonyl compounds (such as 3-methyl-butanal, 3-heptanone or octanal), carboxylic acids (such as pentanoic acid or hexanoic acid) known as odour causing compounds and hydrocarbons (such as decane, undecane or dodecane). Finally, the method was applied to different packaging samples (one odour-unacceptable, two odour-acceptable, and three odourless samples) and to the raw materials in order to find out the odour-responsible volatile organic compounds and their source.     

Automated headspace solid-phase dynamic extraction for the determination of amphetamines and synthetic designer drugs in hair samples

The use of wide-pore stationary phases in capillary electrochromatography has shown exceptional increases in separation efficiency in conjunction with high electroosmotic flow. These effects are due to the perfusive flow mechanism which is primarily controlled by the ionic strength of the mobile phase. Good correlation between calculated values of electrochemical double-layer thickness and efficiency data have also been obtained. Reduced plate height values of <0.5 have been observed with pore sizes of 4000 A. In addition, electroosmotic flow mobility twice that of 3 microm Spherisorb ODS-1 has been obtained.     

Determination of chain stiffness and polydispersity from static light-scattering

Chain stiffness is often difficult to distinguish from molecular polydisperity. Both effects cause a downturn of the angular dependence at large q² (q = (4π/λ)sin θ/2) in a Zimm plot. A quick estimation of polydisperity becomes possible from a bending rod (BR) plot in which lim (c → 0) qRθ/Kc is plotted against q(〈S²〉_z)^1/2 = u. Flexible and semiflexible chains show a maximum whose position is shifted from u_max = 1.41 for monodisperse chains towards larger values as polydispersity is increased, while simultaneously, the maximum height is lowered. Stiff chains display a constant plateau at large q, its value is πM_L where M_L is the linear mass density. Using Koyama's theory, the number of Kuhn segments can be determined from the ratio of the maximum height to the plateau height, if the polydispersity index z = (M_w/M_n ? 1)^?1 is known. Thus, if the weight-average molecular weight M_w, is known, the contour length L_w, the number of Kuhn segments (N_k)_w, the Kuhn segment length l_k and the polydispersity of the stiff chains can be determined. The influence of excluded volume is shown to have no effect on this set of data. The reliability of this set can be cross-checked with the mean-square radius of gyration 〈s²〉_z which can be calculated from the Benoit-Doty equation for polydisperse chains. Rigid and slightly bending rods exhibit no maximum in the BR plot, and the effect of polydispersity can no longer be distinguished from a slight flexibility if only static scattering techniques are applied.     

A study of the static and dynamic adsorption of Zn(II) ions on carbon materials from aqueous solutions

The effect of surface oxidation, solution pH, and ionic strength on the adsorption of Zn(II) ions from aqueous solution under static conditions was studied using commercial activated carbons in the form of grains and cloth. In addition, the effects of surface oxidation and the presence of dissolved natural organic matter (tannic acid) were studied under dynamic conditions using activated carbon cloth column beds. Under static conditions, surface oxidation largely increased Zn2+ uptake and two H+ ions were displaced from the oxidized carbon surface per Zn(II) ion adsorbed. It is proposed that adsorption of Zn(II) on the as-received basic carbons was due to C(pi)-cation interactions. An increase in solution pH in the range 3-6 increased Zn(II) uptake, whereas an increase in ionic strength decreased Zn(II) uptake because of the screening effect of the added salt. In the experiments carried out with carbon column beds, the oxidized activated carbon cloth was also more effective than the as-received carbon to remove Zn(II) ions. In this case, the presence of tannic acid decreased the efficiency of the oxidized activated carbon cloth bed to remove Zn(II) ions. An increase in the tannic acid initial concentration had a greater effect on the removal of tannic acid than on the removal of Zn(II) by the column bed. This may be a consequence of the greater size of tannic acid molecules and their low affinity for oxidized carbon surfaces.     

Influence of molecular topology on the static and dynamic properties of single polymer chain in solution

The influence of molecular topology on the structural and dynamic properties of polymer chain in solution with ring structure, three-arm branched structure, and linear structure are studied by molecular dynamics simulation. At the same degree of polymerization (N), the ring-shaped chain possesses the smallest size and largest diffusion coefficient. With increasing N, the difference of the radii of gyration between the three types of polymer chains increases, whereas the difference of the diffusion coefficients among them decreases. However, the influence of the molecular topology on the static and the dynamic scaling exponents is small. The static scaling exponents decrease slightly, and the dynamic scaling exponents increase slightly, when the topology of the polymer chain is changed from linear to ring-shaped or three-arm branched architecture. The dynamics of these three types of polymer chain in solution is Zimm-like according to the dynamic scaling exponents and the dynamic structure factors.     

Synthesis,static, and dynamic light scattering studies of soluble aromatic polyamide

Aromatic polyamide was synthesized via condensation polymerization of 4‐aminophenyl sulfone (APS) with isophthaloyl chloride (IPC) using N,N‐dimethyl acetamide (DMAc) as a solvent under anhydrous conditions. The purified aramid was studied by laser light scattering (LLS) in dimethyl sulfoxide (DMSO), a thermodynamically good solvent at 20°C. Static and dynamic light scattering studies permitted to determine the weight average molecular weight , radius of gyration , second virial coefficient A₂, the hydrodynamic radius R_H, and the diffusion coefficient D. Light scattering experiments were conducted at five concentrations ranging from 0.27 to 2.5 g/L. LLS measurement is also a very useful technique to study the aggregation or association in a polymer system as long as the large “clusters” are reasonably stable in time. The intensity autocorrelation function obtained on the quasi‐elastically scattered light showed a simple diffusive relaxation mode. The ratio of radius of gyration to the hydrodynamic radius, i.e. ～ 1.3 indicates that the polyamide chain has coil conformation in DMSO at 20°C. Copyright © 2008 John Wiley & Sons, Ltd.     

Quantitative determination of volatile organic compounds (VOC) in milk by multiple dynamic headspace extraction and GC-MS

A method for the accurate determination of volatile organic compounds (VOC) in milk samples has been developed and tested. It combines multiple dynamic headspace extraction with GC-MS. Absolute amounts of VOC in the liquid phase are obtained by determining the first order kinetic dependence of the stepwise extraction of the analytes and internal standards from the liquid matrix. Compounds released from milk were collected on a train of traps filled with different solid sorbents to cover all components having a number of carbon atoms ranging from 4 to 15. They were analysed by GC-MS after thermal desorption of VOC from the collecting traps. Quantification of VOC in milk was performed using deuterated compounds as internal standards. The method was used to follow seasonal variations of monoterpenes in goat milk and to detect the impact of air pollution on the quality of milk.     

Studies about the desorption of volatile halocarbons from activated carbon by application of static headspace gas chromatography

The analysis of volatile halocarbons (VHCs) in air or ground air is often performed after their adsorption and enrichment on activated carbon. The current procedure for their subsequent determination is based on their extraction from the activated carbon with a volatile organic solvent such as n-pentane, followed by gaschromatographic (GC) analysis. In order to avoid extraction steps, the static headspace method in combination with GC analysis using diphenylmethane as a desorption agent has been applied. Satisfactory desorption rates for the chloromethanes, for 1,1,1-trichloroethane, trichloroethene and for tetrachloroethene have been obtained after a sample equilibration of 45 min at 120° C in the presence of diphenylmethane. The results have shown a higher recovering rate especially of the unsaturated VHCs compared to the extraction with n-pentane, whereby a potential loss of analytes by the latter procedure has been avoided.     

Studies about the desorption of volatile halocarbons from activated carbon by application of static headspace gas chromatography

The analysis of volatile halocarbons (VHCs) in air or ground air is often performed after their adsorption and enrichment on activated carbon. The current procedure for their subsequent determination is based on their extraction from the activated carbon with a volatile organic solvent such as n-pentane, followed by gaschromatographic (GC) analysis. In order to avoid extraction steps, the static headspace method in combination with GC analysis using diphenylmethane as a desorption agent has been applied. Satisfactory desorption rates for the chloromethanes, for 1,1,1-trichloroethane, trichloroethene and for tetrachloroethene have been obtained after a sample equilibration of 45 min at 120 degrees C in the presence of diphenylmethane. The results have shown a higher recovering rate especially of the unsaturated VHCs compared to the extraction with n-pentane, whereby a potential loss of analytes by the latter procedure has been avoided.     

Monitoring and fast detection of mycotoxin-producing fungi based on headspace solid-phase microextraction and headspace sorptive extraction of the volatile metabolites

Solid phase microextraction in combination with capillary GC-MS was used as monitoring technique for the collection and detection of the fungal volatile metabolite (+)-aristolochene by sporulated surface cultures of Penicillium roqueforti. A comparison was made between different toxigenic and nontoxigenic strains of P. roqueforti. Different growth conditions and media, such as malt extract agar, potato dextrose agar and sabouraud dextrose agar were compared. Whereas toxigenic strains produced large amounts of (+)-aristolochene, beta-elemene, valencene and germacrene A, nontoxigenic P. roqueforti strains showed a remarkably different headspace profile, in which ethyl-2-hexenoate, E-beta-caryophyllene, aromadendrene and beta-patchoulene were the predominant volatiles, apart from other sesquiterpene hydrocarbons present at lower concentrations. Stir bar sorptive extraction, was also applied in the headspace sampling mode, i.e. headspace sorptive extraction (HSSE) for the enrichment of fungal volatiles from sporulated surface cultures to differentiate between toxigenic and nontoxigenic fungi. Hence, it can be concluded that headspace analysis of volatile fungal metabolites by SPME and HSSE in combination with capillary GC-MS is a suitable monitoring technique for the fast detection of mycotoxin producing fungi.     

Differentiation of the volatile profile of microbiologically contaminated canned tomatoes by dynamic headspace extraction followed by gas chromatography-mass spectrometry analysis

The aromatic profile of microbiologically contaminated canned tomatoes was analyzed by the dynamic headspace extraction technique coupled with gas chromatography-mass spectrometry. Canned tomatoes contaminated with Escherichia coli, Saccharomyces cerevisiae and Aspergillus carbonarius were analyzed after 2 and 7 days. About 100 volatiles were detected, among which alcohols, aldehydes and ketones were the most abundant compounds. Gas chromatographic peak areas were used for statistical purposes. First, principal component analysis was carried out in order to visualize data trends and clusters. Then, linear discriminant analysis was performed in order to detect the set of volatile compounds ables to differentiate groups of analyzed samples. Five volatile compounds, i.e. ethanol, β-myrcene, o-methyl styrene, 6-methyl-5-hepten-2-ol and 1-octanol, were found to be able to better discriminate between uncontaminated and contaminated samples. Prediction ability of the calculated model was estimated to be 100% by the “leave-one-out” cross-validation. An electronic nose device was then used to analyze the same contaminated and not contaminated canned tomato samples. Preliminary results were compared with those obtained by dynamic headspace gas chromatography-mass spectrometry, showing a good agreement.     

Fluorescence depolarization and contact angle investigation of dynamic and static interfacial tension of liquid crystal display materials

Interfacial interactions control two processes empirically known to be critical for molecular anchoring in twisted nematic liquid crystal displays technology (TN-LCDs): surface treatment and filling procedure. Static and dynamical interfacial tensions (Gamma(SL)) between liquids and several substrates with similar roughness were observed respectively by contact angle (theta(c)) of sessile drops and by fluorescence depolarization of thin liquid films flowing at high velocity. Gamma(SL) decreased when glass was coated with tin dioxide and increased with polyvinyl alcohol (PVA) deposition. Drops were circular for all substrates except rubbed PVA, where they flowed spontaneously along the rubbing direction, reaching an oblong form that had theta(c) parallel and perpendicular to the rubbing direction respectively greater and smaller than theta(c) for non-rubbed PVA. This is attributed to polar group alignment generating an asymmetric Gamma(SL) distribution with nanometric preferential direction, inducing a capillary-like flow. Polarization and anisotropy maps for high-velocity flow parallel to the PVA rubbing direction showed an increase in the net alignment of molecular domains and a widening of the region where it occurred. This is attributed to preferential anchoring in the downstream direction, instead of in several directions, as for non-rubbed PVA. This explains why filling direction is crucial for TN-LCDs homogeneous behavior.     

Comparison of the static,dynamic and static-dynamic pressurised liquid extraction modes for the removal of nitrated polycyclic aromatic hydrocarbons from soil with on-line filtration-preconcentration

The three operational modes of pressurised liquid extraction (PLE) (namely, static, dynamic and static-dynamic) have been applied for the extraction of nitrated polycyclic aromatic hydrocarbons from both spiked and natural contaminated soils. A comparison of the three modes in terms of experimental set-up used, extraction time needed for total removal of the analytes and precision has been carried out. The use of a flow-injection manifold as interface between every pressurised extractor and a filtration-preconcentration system has allowed the partial automation of the proposed approaches. Efficiencies close to 100% have been provided by the three operational modes. However, the static-dynamic mode has been proved as the most suitable alternative providing the shortest extraction time (25 min) versus the static (30 min) and the dynamic (50-70 min) modes. Gas chromatography with MS-MS ion preparation mode has been used providing both high selectivity (no interferences were observed) and sensitivity (detection limits of low pg). The comparison of the proposed approaches with the reference method 3540 of the US Environmental Protection Agency (EPA) has shown that both methods provide similar efficiencies with an important shortening in the extraction time (25-70 min by PLE versus 24 h by the EPA method). The use of water as leaching agent has avoided the use of organic solvents providing an environmentally friendly method.     

Suitability of polydimethylsiloxane rods for the headspace sorptive extraction of polybrominated diphenyl ethers from water samples

The suitability of an inexpensive polydimethysiloxane (PDMS) sorbent, produced on an industrial scale, for the extraction of polybrominated diphenyl ethers (PBDEs), from tetra- to hexabrominated congeners, from water samples was assessed. Experiments were carried out using samples spiked with a pentabromo diphenyl ether (pentaBDE) mixture, PDMS rods with a diameter of 2 mm and gas chromatography with micro-electron-capture detection (GC-micro-ECD). Influence of several variables on the efficiency of the enrichment step and the further desorption of the analytes was investigated in detail. The best performance was achieved in the headspace sorptive extraction (HSSE) mode, at 95 degrees C, using 80 mL water samples containing a 30% of sodium chloride. Extractions were performed overnight using disposable PDMS rods with a length of 10 mm (31 microL volume). Analytes were further recovered from the PDMS sorbent using just 1 mL of diethyl ether. This solvent was evaporated and extracts reconstituted with 25 microL of isooctane. Under final working conditions absolute extraction efficiencies from 69 to 93% and enrichment factors higher than 2200 folds were achieved for all species. The proposed method provided acceptable precisions (relative standard deviations values under 12%), correlation coefficients higher than 0.998 and the yield of the HSSE process remained constant for different water samples.