Two isomorphous ZnII/CoII complexes with tri‐tert‐butoxysilanethiol and histamine,and (4‐hydroxymethyl‐1H‐imidazole‐κN)bis(tri‐tert‐butoxysilanethiolato‐κ2O,S)zinc(II)

The complexes [2‐(1H‐imidazol‐4‐yl‐κN³)ethylamine‐κN]bis(tri‐tert‐butoxysilanethiolato‐κS)cobalt(II), [Co(C₁₂H₂₇O₃SSi)₂(C₅H₉N₃)], and [2‐(1H‐imidazol‐4‐yl‐κN³)ethylamine‐κN]bis(tri‐tert‐butoxysilanethiolato‐κS)zinc(II), [Zn(C₁₂H₂₇O₃SSi)₂(C₅H₉N₃)], are isomorphous. The central Zn^II/Co^II ions are surrounded by two S atoms from the tri‐tert‐butoxysilanethiolate ligand and by two N atoms from the chelating histamine ligand in a distorted tetrahedral geometry, with two intramolecular N—H...O hydrogen‐bonding interactions between the histamine NH₂ groups and tert‐butoxy O atoms. Molecules of the complexes are joined into dimers via two intermolecular bifurcated N—H...(S,O) hydrogen bonds. The Zn^II atom in [(1H‐imidazol‐4‐yl‐κN³)methanol]bis(tri‐tert‐butoxysilanethiolato‐κ²O,S)zinc(II), [Zn(C₁₂H₂₇O₃SSi)₂(C₄H₆N₂O)], is five‐coordinated by two O and two S atoms from the O,S‐chelating silanethiolate ligand and by one N atom from (1H‐imidazol‐4‐yl)methanol; the hydroxy group forms an intramolecular hydrogen bond with sulfur. Molecules of this complex pack as zigzag chains linked by N—H...O hydrogen bonds. These structures provide reference details for cysteine‐ and histidine‐ligated metal centers in proteins.     

A study of chirality in bis(1,2‐dimethoxyethane‐κ2O,O′)sodium bis(tri‐tert‐butoxysilanethiolato‐κ2O,S)sodate

This work presents an analysis of self‐assembly of a complex molecule from simpler ions, some of which are asymmetric, and is an example of a sodium silanethiolate. The tri‐tert‐butoxysilanethiolate anion has two helical conformers (P and M), so aggregation of silanethiolates can proceed with recognition of chirality. Alkali metal silanethiolates can form cyclic solvated oligomers (e.g. dimers) or complexes such as sodates with anions of general formula R₂Na⁻. We note that all known sodates (and lithiates) contain both ligands of the same helicity in the anion, whereas in the dimers the metal atoms are coordinated by silanethiolate ligands of different helicity. The title compound, a new example of a sodate, [Na(C₄H₁₀O₂)₂][Na(C₁₂H₂₇O₃SSi)₂] or [Na{(^tBuO)₃SiS}₂][Na(DME)₂] (DME is 1,2‐dimethoxyethane), is built up of separate ion pairs with no significant interactions. The anion is formed from an Na atom O,S‐chelated by two silanethiolate ligands of the same helicity (both P or both M), while the cation contains an Na atom solvated by two DME molecules. Because the structure is centrosymmetric, equal numbers of both conformational enantiomers are present in the crystal lattice.     

(2,2′‐Biquinoline‐κ2N,N′)dichloropalladium(II), ‐copper(II) and ‐zinc(II)

In the three title complexes, namely (2,2′‐biquinoline‐κ²N,N′)dichloro­palladium(II), [PdCl₂(C₁₈H₁₂N₂)], (I), and the corresponding copper(II), [CuCl₂(C₁₈H₁₂N₂)], (II), and zinc(II) complexes, [ZnCl₂(C₁₈H₁₂N₂)], (III), each metal atom is four‐coordinate and bonded by two N atoms of a 2,2′‐biquinoline molecule and two Cl atoms. The Pd^II atom has a distorted cis‐square‐planar coordination geometry, whereas the Cu^II and Zn^II atoms both have a distorted tetra­hedral geometry. The dihedral angles between the N—M—N and Cl—M—Cl planes are 14.53 (13), 65.42 (15) and 85.19 (9)° for (I), (II) and (III), respectively. The structure of (II) has twofold imposed symmetry.     

Dichloro­(propane‐1,3‐diamine‐κ2N,N′)platinum(II), dichloro­(propane‐1,3‐diamine‐κ2N,N′)­palladium(II) and μ‐4,9‐diaza­dodecane‐1,12‐diamine‐κ2N1,N4:κ2N9,N12‐bis­[dichloro­platinum(II)]

In the title compounds, [PtCl₂(C₃H₁₀N₂)], (I), [PdCl₂(C₃H₁₀N₂)], (II), and [Pt₂Cl₄(C₁₀H₂₆N₄)], (III), each metal atom lies in a distorted cis‐square coordination geometry. Compounds (I) and (II) are isostructural, and each complex has a mirror plane through the metal atom and the middle C atom of the propane‐1,3‐diamine ligand. In (III), the binuclear complex [Pt₂Cl₄(spn)] has an inversion center at the middle of the 4,9‐diaza­dodecane‐1,12‐diamine (spermine, spn) ligand. The six‐membered chelate rings in (III) adopt a chair form, which is unsymmetrical and less flattened than those in (I) and (II). In all three crystal structures, there are inter­molecular N—H⋯Cl hydrogen bonds.     

(μ‐Tri‐tert‐butoxysilanethiol­ato)­bis[(tetra­hydro­furan)lithium(I)] and catena‐poly[[bis­(μ‐tri‐tert‐butoxy­silanethiol­ato)dilithium(I)]‐μ‐dimethoxy­ethane]: solvent coordination as the structure‐forming factor

The title compounds, μ‐(tri‐tert‐butoxy­silanethiol­ato‐κ²S:S)‐bis[(tetra­hydro­furan‐κO)lithium(I)], [Li₂(C₁₂H₂₇O₃SSi)₂(C₄H₈O)₂], (I), and catena‐poly[[bis­(μ‐tri‐tert‐butoxysilanethiol­ato)‐1:2κ²S;1κS:2κS,O‐dilithium(I)]‐μ‐dimethoxy­ethane‐κ²O:O′], [Li₂(C₁₂H₂₇O₃SSi)₂(C₄H₁₀O₂)]_n, (II), were obtained by the reaction of tri‐tert‐butoxy­silanethiol with metallic lithium. The crude product, when recrystallized from tetra­hydro­furan (THF) yields (I), and when recrystallized from 1,2‐dimethoxy­ethane (DME) gives (II). Compound (I) forms centrosymmetric dimers in the solid state with an Li₂S₂ central core, whereas (II) forms infinitely long chains, in which the centrosymmetric dimeric units are linked together by the bidentate DME ligand (also residing on an inversion centre), thus forming a coordination polymer. The formation of a one‐dimensional structure in (II) is a consequence of replacement of a monodentate THF solvent mol­ecule with a bidentate DME mol­ecule.     

A three‐dimensional framework in 2,2′‐biimidazolium bis(2,2′‐biimidazole‐κ2N,N′)bis(biphenyl‐2,4′‐dicarboxylato‐κO)manganese(II) hexahydrate

In the title salt, (C₆H₈N₄)[Mn(C₁₄H₈O₄)₂(C₆H₆N₄)₂]·6H₂O, the Mn^II atom lies on an inversion centre and is coordinated by four N atoms from two 2,2′‐biimidazole (biim) ligands and two O atoms from two biphenyl‐2,4′‐dicarboxylate (bpdc) anions to give a slightly distorted octahedral coordination, while the cation lies about another inversion centre. Adjacent [Mn(bpdc)₂(biim)₂]²⁻ anions are linked via two pairs of N—H...O hydrogen bonds, leading to an infinite chain along the [100] direction. The protonated [H₂biim]²⁺ moiety acts as a charge‐compensating cation and space‐filling structural subunit. It bridges two [Mn(bpdc)₂(biim)₂]²⁻ anions through two pairs of N—H...O hydrogen bonds, constructing two R₂²(9) rings, leading to a zigzag chain in the [2] direction, which gives rise to a ruffled set of [H₂biim]²⁺[Mn(bpdc)₂(biim)₂]²⁻ moieties in the [01] plane. The water molecules give rise to a chain structure in which O—H...O hydrogen bonds generate a chain of alternating four‐ and six‐membered water–oxygen R₄²(8) and R₆⁶(12) rings, each lying about independent inversion centres giving rise to a chain along the [100] direction. Within the water chain, the (H₂O)₆ water rings are hydrogen bonded to two O atoms from two [Mn(bpdc)₂(biim)₂]²⁻ anions, giving rise to a three‐dimensional framework.     

Di­aqua­bis(1,10‐phenanthroline‐κ2N,N′)­manganese(II) thiodiglycolate bis(1,10‐phenanthroline‐κ2N,N′)(thiodiglycolato‐κ2O,O′)­manganese(II) tridecahydrate

The title compound, [Mn(C₁₂H₈N₂)₂(H₂O)₂](C₄H₄O₄S)·[Mn(C₄H₄O₄S)(C₁₂H₈N₂)₂]·13H₂O, contains one dianion of thio­diglycolic acid (tdga²⁻) and two independent man­ganese(II) moieties, viz. [Mn(phen)₂(H₂O)₂]²⁺ and [Mn(tdga)(phen)₂], where phen is 1,10‐phenanthroline. The Mn^II atoms are octahedrally coordinated by four N atoms of two bidentate phen ligands [Mn—N = 2.240 (2)–2.3222 (19) Å] and either two water O atoms or two tdga carboxyl O atoms [Mn—O = 2.1214 (17)–2.1512 (17) Å]. The tdga ligand chelates as an O,O′‐bidentate ligand, forming an eight‐membered ring with one Mn atom. The free tdga²⁻ dianion is hydrogen bonded to an [Mn(phen)₂(H₂O)₂]²⁺ ion, with O⋯O distances of 2.606 (2) and 2.649 (2) Å. The crystal structure is further stabilized by an extensive network of hydrogen bonds involving 13 water mol­ecules.     

Bis(tetraphenylphosphonium) bis[cis‐1,2‐bis(methoxycarbonyl)ethylenedithiolato‐κ2S,S′]nickelate(II) and bis(tetraphenylphosphonium) bis[cis‐1,2‐bis(methoxycarbonyl)ethylenedithiolato‐κ2S,S′]nickelate(III) iodide

The crystal structures of the title compounds, (C₂₄H₂₀P)₂[Ni(C₆H₆O₄S₂)₂], (I), and (C₂₄H₂₀P)₂[Ni(C₆H₆O₄S₂)₂]I, (II), in the diamagnetic reduced (2–) and paramagnetic oxidized (1–) states, are reported at 200 and 293 K, respectively. In both compounds, the Ni atom lies on an inversion centre and the NiS₄ coordination is thus required to be exactly planar. In the diamagnetic complex, (I), the Ni—S distances are 2.1818 (7) and 2.1805 (6) Å, while they are 2.1481 (6) and 2.1392 (5) Å in the paramagnetic complex, (II). This results from both the different complex core oxidation states and the different conformations of the methoxycarbonyl groups.     

[N‐(2‐Hydroxy­ethyl)ethyl­enediamine‐κ3N,N′,O]‐cis‐bis(isothio­cyanato‐κN)copper(II)

In the novel transition metal isothio­cyanate complex of N‐(2‐hydroxy­ethyl)ethyl­enediamine (hydet‐en) with copper, [Cu(NCS)₂(C₄H₁₂N₂O)], the Cu atom lies in a distorted square‐pyramidal environment, coordinated by four N atoms in the basal plane and an apical O atom. The hydet‐en ligand is N,N,O‐tridentate, in contrast to the disposition in previously studied complexes, while the isothio­cyanate ions act as N‐atom donor ligands. The monomeric units are linked to one another by hydrogen bonds.     

Dibromo(pyridoxal semicarbazone‐κ3N1,O3,O3′)copper(II)

The title compound, di­bromo(3‐hydroxy‐5‐hydroxy­methyl‐2‐methyl‐4‐pyridine­carbox­aldehyde semicarbazone‐κ³N¹,O³,O^3′)copper(II), [CuBr₂(C₉H₁₂N₄O₃)], consists of discrete complex units with the tridentate pyridoxal semicarbazone ligand as a zwitterion in an almost planar configuration. The Cu^II ions are in a distorted square‐pyramidal coordination, with the equatorial Br atom at a distance of 2.4017 (6) Å and the apical Br atom at a distance of 2.6860 (6) Å.     

(2,2′‐Biquinoline‐κ2N,N′)bis(nitrato‐κ2O,O′)copper(II)

In the title monomer, [Cu(NO₃)₂(C₁₈H₁₂N₂)], the six‐coordinated Cu^II atom lies on a twofold axis which bisects one of the ligands (a chelating biquinoline) and duplicates the remaining ligand, a chelating nitrate. The latter binds in a very asymmetric way, consistent with a Jahn–Teller distortion in the coordination polyhedron which, due to the triple chelation, is extremely distorted and difficult to describe in terms of any regular model.     

Tris(1,10‐phenanthroline‐κ2N,N′)iron(II) bis(2,4,5‐tricarboxybenzoate) monohydrate and tris(2,2′‐bipyridine‐κ2N,N′)iron(II) 2,5‐dicarboxybenzene‐1,4‐dicarboxylate–benzene‐1,2,4,5‐tetracarboxylic acid–water (1/1/2)

The title compounds, tris(1,10‐phenanthroline‐κ²N,N′)iron(II) bis(2,4,5‐tricarboxybenzoate) monohydrate, [Fe(C₁₂H₈N₂)₃](C₁₀H₅O₈)₂·H₂O, (I), and tris(2,2′‐bipyridine‐κ²N,N′)iron(II) 2,5‐dicarboxybenzene‐1,4‐dicarboxylate–benzene‐1,2,4,5‐tetracarboxylic acid–water (1/1/2), [Fe(C₁₀H₈N₂)₃](C₁₀H₄O₈)·C₁₀H₆O₈·2H₂O, (II), were obtained during an attempt to synthesize a mixed‐ligand complex of Fe^II with an N‐containing ligand and benzene‐1,2,4,5‐tetracarboxylic acid via a solvothermal reaction. In both mononuclear complexes, each Fe^II metal ion is six‐coordinated in a distorted octahedral manner by six N atoms from three chelating 1,10‐phenanthroline or 2,2′‐bipyridine ligands. In compound (I), the Fe^II atom lies on a twofold axis in the space group C2/c, whereas (II) crystallizes in the space group P2₁/n. In both compounds, the uncoordinated carboxylate anions and water molecules are linked by typical O—H...O hydrogen bonds, generating extensive three‐dimensional hydrogen‐bond networks which surround the cations.     

Bis­(acetato‐κ2O,O′)(2,9‐di­methyl‐1,10‐phenanthroline‐κ2N,N′)mercury(II) in two differently hydrated crystal forms

Two differently hydrated crystal forms of the title compound, viz. bis­(acetato‐κ²O,O′)(2,9‐di­methyl‐1,10‐phenanthroline‐κ²N,N′)­mercury(II), [Hg(C₂H₃O₂)₂(C₁₄H₁₂N₂)] or [HgAc₂(dmph)] [dmph is 2,3‐di­methyl‐1,10‐phenantroline (neocuproine) and Ac is acetate], (I), and tris­[bis­(acetato‐κ²O,O′)(2,9‐di­methyl‐1,10‐phenanthroline‐κ²N,N′)­mercury(II)] hexadecahydrate, [Hg(C₂H₃O₂)₂(C₁₄H₁₂N₂)]₃·16H₂O or [HgAc₂(dmph)]₃·16H₂O, (II), are presented. Both structures are composed of very simple monomeric units, which act as the building blocks of complex packing schemes stabilized by a diversity of π–π and hydrogen‐bonding interactions.     

(2,2′‐Bi­pyridine‐κ2N,N′)(2,3‐naph­tha­lene­diolato‐κ2O,O′)­palladium(II) and (2,2′‐bi­quinoline‐κ2N,N′)(2,3‐naph­thal­ene­diolato‐κ2O,O′)­palladium(II)

In the title compounds, [Pd(C₁₀H₆O₂)(C₁₀H₈N₂)], (I), and [Pd(C₁₀H₆O₂)(C₁₈H₁₂N₂)], (II), each Pd^II atom has a similar distorted cis‐planar four‐coordination geometry involving two O atoms of the 2,3‐­naphthalenediolate dianion and two N atoms of the 2,2′‐bi­pyridine or 2,2′‐bi­quinoline ligand. The overall structure of (I) is essentially planar, but that of (II) is not, as a result of intramolecular overcrowding leading to bowing of the bi­quinoline ligand.     

[2,2′‐(1,3,5,8,10,12‐Hexaazacyclotetradecane‐3,10‐diyl)diethanol‐κ4N1,N5,N8,N12]bis(thiocyanato‐κS)copper(II)

In the crystal structure of the title compound, [Cu(NCS)₂(C₁₂H₃₀N₆O₂)], the Cu atom lies on an inversion centre and has an elongated octahedral coordination, with Cu—N distances of 2.004 (2) and 2.015 (2) Å, and a Cu—S distance of 2.9696 (10) Å. The 2,2′‐ethanol chains are axially oriented. The mol­ecules are linked to form a three‐dimensional network via O—H?N, N—H?O and N—H?S hydrogen bonds.     

Diaquabis(1,3‐propanediamine‐κ2N,N′)nickel(II) bis(sulfanilate)

The title compound, [Ni(C₃H₁₀N₂)₂(H₂O)₂](C₆H₆NO₃S)₂, contains alternating layers of sulfanilate anions and di­aqua­bis(1,3‐propane­di­amine)­nickel(II) cations. The Ni atom lies on an inversion centre and is hexacoordinated by the 1,3‐propane­di­amine ligands, which function as N,N′‐bidentate ligands, and the water mol­ecules, which are in a trans arrangement. The sulfanilate anions are arranged in layers, with the sulfonate and amine groups directed towards opposite sides of the layer. The structure is stabilized by a network of hydrogen bonding between the O and N atoms of the sulfanilate anions, the water mol­ecules, and the N atoms of the 1,3‐propane­di­amine ligands.     

Bis(5‐aminotetrazole‐1‐acetato‐κO)tetraaquacobalt(II) and catena‐poly[[cadmium(II)]‐bis(μ‐5‐aminotetrazole‐1‐acetato‐κ3N4:O,O′)]

The Co^II atom in bis(5‐aminotetrazole‐1‐acetato)tetraaquacobalt(II), [Co(C₃H₄N₅O₂)₂(H₂O)₄], (I), is octahedrally coordinated by six O atoms from two 5‐aminotetrazole‐1‐acetate (atza) ligands and four water molecules. The molecule has a crystallographic centre of symmetry located at the Co^II atom. The molecules of (I) are interlinked by hydrogen‐bond interactions, forming a two‐dimensional supramolecular network structure in the ac plane. The Cd^II atom in catena‐poly[[cadmium(II)]‐bis(μ‐5‐aminotetrazole‐1‐acetato], [Cd(C₃H₄N₅O₂)₂]_n, (II), lies on a twofold axis and is coordinated by two N atoms and four O atoms from four atza ligands to form a distorted octahedral coordination environment. The Cd^II centres are connected through tridentate atza bridging ligands to form a two‐dimensional layered structure extending along the ab plane, which is further linked into a three‐dimensional structure through hydrogen‐bond interactions.     

(1,3‐Dimethylimidazolidine‐2‐selone‐κSe)bis(1,10‐phenanthroline‐κ2N,N′)copper(II) bis(perchlorate) and bis(2,2′‐bipyridyl‐κ2N,N′)(imidazolidine‐2‐thione‐κS)copper(II) bis(perchlorate)

In the first title salt, [Cu(C₁₂H₈N₂)₂(C₅H₁₀N₂Se)](ClO₄)₂, the Cu^II centre occupies a distorted trigonal–bipyramidal environment defined by four N donors from two 1,10‐phenanthroline (phen) ligands and by the Se donor of a 1,3‐dimethylimidazolidine‐2‐selone ligand, with the equatorial plane defined by the Se and by two N donors from different phen ligands and the axial sites occupied by the two remaining N donors, one from each phen ligand. The Cu—N distances span the range 1.980 (10)–2.114 (11) Å and the Cu—Se distance is 2.491 (3) Å. Intermolecular π–π contacts between imidazolidine rings and the central rings of phen ligands generate chains of cations. In the second salt, [Cu(C₁₀H₈N₂)₂(C₃H₆N₂S)](ClO₄)₂, the Cu^II centre occupies a similar distorted trigonal–bipyramidal environment comprising four N donors from two 2,2′‐bipyridyl (bipy) ligands and an S donor from an imidazolidine‐2‐thione ligand. The equatorial plane is defined by the S donor and two N donors from different bipy ligands. The Cu—N distances span the range 1.984 (6)–2.069 (7) Å and the Cu—S distance is 2.366 (3) Å. Intermolecular π–π contacts between imidazolidine and pyridyl rings form chains of cations. A major difference between the two structures is due to the presence in the second complex of two N—H...O hydrogen bonds linking the imidazolidine N—H hydrogen‐bond donors to perchlorate O‐atom acceptors.     

Two two‐dimensional hydrogen‐bonded coordination networks: bis(3‐carboxybenzoato‐κO)bis(4‐methyl‐1H‐imidazole‐κN3)copper(II) and bis(3‐methylbenzoato‐κN)bis(4‐methyl‐1H‐imidazole‐κN3)copper(II) monohydrate

The title two‐dimensional hydrogen‐bonded coordination compounds, [Cu(C₈H₅O₄)₂(C₄H₆N₂)₂], (I), and [Cu(C₈H₇O₂)₂(C₄H₆N₂)₂]·H₂O, (II), have been synthesized and structurally characterized. The molecule of complex (I) lies across an inversion centre, and the Cu²⁺ ion is coordinated by two N atoms from two 4‐methyl‐1H‐imidazole (4‐MeIM) molecules and two O atoms from two 3‐carboxybenzoate (HBDC⁻) anions in a square‐planar geometry. Adjacent molecules are linked through intermolecular N—H...O and O—H...O hydrogen bonds into a two‐dimensional sheet with (4,4) topology. In the asymmetric part of the unit cell of (II) there are two symmetry‐independent molecules, in which each Cu²⁺ ion is also coordinated by two N atoms from two 4‐MeIM molecules and two O atoms from two 3‐methylbenzoate (3‐MeBC⁻) anions in a square‐planar coordination. Two neutral complex molecules are held together via N—H...O(carboxylate) hydrogen bonds to generate a dimeric pair, which is further linked via discrete water molecules into a two‐dimensional network with the Schläfli symbol (4³)₂(4⁶,6⁶,8³). In both compounds, as well as the strong intermolecular hydrogen bonds, π–π interactions also stabilize the crystal stacking.     

Bis­(saccharinato‐κN)zinc(II) com­plexes with N,N′‐bidentate 2‐amino­methyl­pyridine and 2‐amino­ethylpyridine

The structures of trans‐bis[2‐(amino­methyl)­pyridine‐κ²N,N′]­bis­(saccharinato‐κN)­zinc(II), [Zn(C₇H₄NO₃S)₂(C₆H₈N₂)₂], (I), and [2‐(amino­ethyl)­pyridine‐κ²N,N′]bis­(saccharinato‐κN)­zinc(II), [Zn(C₇H₄NO₃S)₂(C₇H₁₀N₂)], (II), exhibit octa‐ and tetrahedrally coordinated Zn^II atoms, respectively. The di­amine ligands behave as N,N′‐bidentate ligands, while saccharinate (sac) is coordinated through the N atom. In (I), the complex lies about an inversion centre with the Zn atom disordered and displaced by 0.256 (2) Å from a centre of symmetry towards a sac N atom. The crystal structure of (I) is stabilized by N—H⋯O hydrogen bonds and the crystal packing of (II) is determined by hydrogen bonding as well as weak π–π stacking interactions between the sac ligands.