Collisional activation spectra of [M + Li]+, [M + Na]+ and [M + K]+ ions formed by field desorption of some monosaccharides

The collisional activation spectra of monosaccharide ions formed by [Li]⁺, [Na]⁺ and [K]⁺ ion attachment under field desorption conditions are reported. It is shown that the elimination of the alkali ions is determined by the alkali ion affinities of the molecules (M) and competes with a fragmentation of M which is almost independent of the alkali ion attached. Correspondingly the alkali ion is predominantly retained in the fragment ions. The usefulness of this method for the differentiation of underivatized isomers is demonstrated.     

Dehydration of peptide [M + H]+ ions in the gas phase

The loss of water from protonated peptides was studied using [¹⁸O]-labeling of the C-terminal carboxyl group. The structures (including the location of the isotopic label) of first-generation product ions were examined by sequential product ion scanning (MS³ and MS⁴) using a hybrid sector/quadrupole mass spectrometer. Water loss may involve carboxylic acid groups, side-chain hydroxyls, or peptide backbone oxygens. Although one of these three pathways often predominates, more than one dehydration route can be operative for a single peptide structure. When peptide backbone oxygen is lost, the dehydration can occur at one or two primary sites along the backbone, with the location of the site(s) varying among peptides. When water loss involves the C-terminal carboxyl group, the resulting ion may undergo extensive intraionic oxygen isotope exchange. This evidence for complex intraionic interactions further emphasizes the significance of gas-phase conformation in determining the fragmentations of peptide ions.     

On the CO elimination from [M – CH3]+ ions in substituted phenyl methyl ethers

It was inferred from the collisional activation spectra that CO loss from [M – CH₃]⁺ ions generated from o-,m- and p-cyanoanisole yields a common ion, presumably the cyanocyclopentadienyl cation. A similar product ion is found to be generated in the three dimethoxybenzene isomers. In case of o-dimethoxybenzene loss of CO was also found to occur via an important additional route, which leads to the formation of protonated phenol.     

Criteria for distinguishing between [M]+· and [M+H]+ ions in field desorption mass spectra

Ten criteria are introduced to distinguish between molecular ions and protonated parent molecules in field desorption mass spectrometry.     

Electrospray ionization mass spectrometric analysis of microcystins, cyclic heptapeptide hepatotoxins: modulation of charge states and [M+H]+ to [M+Na]+ ratio

Electrospray ionization mass spectrometry was used to develop a rapid, sensitive, and accurate method for determination and identification of hepatotoxic microcystins, cyanobacterial cyclic heptapeptides. To optimize the electrospray ionization conditions, factors affecting charge state distribution, such as amino acid components of sample, proton affinity of the additives, and additive concentration, were investigated in detail and a method for controlling charge states was developed to provide molecular-related ions for assignment of molecular weight and reasonably abundant precursor ions for MS/MS analysis. A procedure for identification of microcystins consisting of known amino acids was proposed: for microcystins giving abundant [M + 2H]2+ ions, the addition of nitrogen-containing bases to the aqueous sample solution is effective to obtain an increased intensity of [M + H]+ ions, whereas the addition of Lewis acids containing nitrogen can produce increased abundances of [M + 2H]2+ ions for microcystins giving weak [M + 2H]2+ ions. Microcystins possessing no arginine residue always give sodium adduct ions [M + Na]+ as the base peak, and these are difficult to fragment via low energy collision-induced dissociation to yield structurally informative products; the addition of oxalic acid increases [M + H]+ ion abundances, and these fragment readily.     

Fragmentation chemistry of [M + Cu]+ peptide ions containing an N-terminal arginine

[M + Cu]+ peptide ions formed by matrix-assisted laser desorption/ionization from direct desorption off a copper sample stage have sufficient internal energy to undergo metastable ion dissociation in a time-of-flight mass spectrometer. On the basis of fragmentation chemistry of peptides containing an N-terminal arginine, we propose the primary Cu+ ion binding site is the N-terminal arginine with Cu+ binding to the guanidine group of arginine and the N-terminal amine. The principal decay products of [M + Cu]+ peptide ions containing an N-terminal arginine are [a(n) + Cu - H]+ and [b(n) + Cu - H]+ fragments. We show evidence to suggest that [a(n) + Cu - H]+ fragment ions are formed by elimination of CO from [b(n) + Cu - H]+ ions and by direct backbone cleavage. We conclude that Cu+ ionizes the peptide by attaching to the N-terminal arginine residue; however, fragmentation occurs remote from the Cu+ ion attachment site involving metal ion promoted deprotonation to generate a new site of protonation. That is, the fragmentation reactions of [M + Cu]+ ions can be described in terms of a "mobile proton" model. Furthermore, proline residues that are adjacent to the N-terminal arginine do not inhibit formation of [b(n) + Cu - H]+ ion, whereas proline residues that are distant to the charge carrying arginine inhibit formation of [b(n) + Cu - H]+ ions. An unusual fragment ion, [c(n) + Cu + H]+, is also observed for peptides containing lysine, glutamine, or asparagine in close proximity to the Cu+ carrying N-terminal arginine. Mechanisms for formation of this fragment ion are also proposed.     

Novel method for [M + Cu]+ ion formation by matrix-assisted laser desorption ionization

Direct deposition of a MALDI sample onto a copper sample stage and irradiation with UV light (337 nm) produces copper adduct ions of both the matrix and analyte molecules. This technique for introducing Cu⁺ into the gas-phase avoids suppression of ion signal that accompanies addition of metal salts to the sample solution. We observe good correlation between the number of basic residues in peptides and the number of Cu⁺ ions that add to the peptide. For example, the peptide KRQHPG contains three basic residues and forms ions with up to three Cu⁺ adducts. Postsource decay experiments demonstrate that for arginine containing peptides, arginine anchors the Cu⁺ ion. That is, all metastable ions contain the arginine complexed to Cu⁺ and the only immonium ion observed is that of arginine–Cu⁺. In addition, preliminary calculations indicate that guanidine has the highest Cu⁺ ion affinity followed by histidine.     

Competing metastable decompositions of [C7H14]+· ions

The relative rates of competing metastable decompositions of fourteen isomeric C7H14 monoolefins were measured and compared. In every case except one the most important metastable reaction was loss of either CH3 or C2H4, but the rates of these and the other reactions observed varied over a wide range. It was concluded that the molecular ions of these compounds probably do not isomerize to a common structure prior to metastable decay. It was found that a terminal double bond strongly enhances metastable loss of C2H4 and that the additional presence of a 2-methyl substituent favours this reaction still more. Several possible mechanisms for this transition are discussed, but none was found to explain the observed results satisfactorily.     

Structure of [C3H5O]+ ions produced from unimolecular decomposition of several [C4H8O]+˙ metastable ions

It is demonstrated by means of collisionally activated decomposition (CAD) that [C₃H₅O]⁺ originating from metastable [C₄H₈O]^+˙ ions are either acylium [C₂H₅CO]⁺ (a) or hydroxycarbenium [CH₂CHCHOH]⁺ (b). Butanone gives exclusively a but 2-methyl-2-propen-1-ol, 2-buten-1-ol, 3-buten-1-ol, butanal and 2-methylpropanal lead to ion b. Both structures a and b are produced from 3-buten-2-ol. These results are discussed in conjunction with experimental and calculated (MINDO/3) thermodynamic data.     

Differences in the keto–enol equilibrium of [M + H]+ ions of bupropion formed by electron impact and fast atom bombardment ionization

The fragmentation of the protonated molecular ion of bupropion produced by collisionally induced decomposition is shown to depend on the ionization method used to form the [M + H]⁺ ion. The daughter ion products do not depend on the energy of decomposition, i.e. high- or low-energy collisions, but on the ratio of the keto-enol equilibrium as influenced by the ionization process.     

Comparison of intensities between doubly charged ions [M + 2H]2+ and singly charged ions [M + H]+ of gramicidin S by electrospray mass spectrometry.

The reason why the intensity of doubly charged ions [M + 2H]2+ of gramicidin S is higher than that of singly charged ions [M + H]+ in electrospray is investigated by ion evaporation theory. As a result of comparison between the total free energies of extracting [M + 2H]2+ and [M + H]+ from a charged droplet to infinity, it is found that the total free energy of [M + 2H]2+ is estimated to be lower than that of [M + H]+. This clearly supports the experimental result. In addition, the importance of the electrostatic contribution in electrospray is demonstrated by showing the result that the total free energy of [M + 2H]2+ without electrostatic contribution is higher than that of [M + H]+.     

Competitive formation of M+˙ and [M + H]+ ions under fast atom bombardment conditions

The competitive formation of molecular ions M^+˙ and protonated molecules [M + H]⁺ under fast atom bombardment (FAB) conditions was examined using various kinds of organic compounds. The use of protic/hydrophilic matrices such as thioglycerol and glycerol resulted in relatively large values of the peak intensity ratio I([M + H]⁺)/I(M^+˙) compared with the use of relatively aprotic/hydrophobic matrices such as m-nitrobenzyl alcohol and o-nitrophenyl octyl ether. The change of matrix from thiol-containing such as thioglycerol and dithiothreitol to alcoholic such as glycerol and pentamethylene glycol increased the I([M + H]⁺)/I(M^+˙) ratio. Furthermore, the change of matrix increased the peak intensity ratio of the doubly charged ion [M + 2H]²⁺ to [M + H]⁺ in the FAB mass spectra of angiotensin I and gramicidin S. The addition of acids to the matrix solution increased the I([M + H]⁺)/I(M^+˙) ratio, although such an effect did not always occur. The acetylation of simple aniline compounds markedly increased the I([M + H]⁺)/I(M^+˙) ratio. It was concluded from these results that the hydrogen bonding interaction between hydroxyl groups(s) of the matrix and basic site(s) of analyte molecules in solution acts advantageously as a quasi-preformed state for [M + H]⁺ formation, and that the presence of significant proton acceptor(s) such as carbonyl group in analytes hinder the M^+˙ formation which may generally occur under FAB conditions. The formation of M^+˙ and [M + H]⁺ ions seemed to occur competitively, reflecting or according to the interaction or solvation states between the analyte and matrix molecules in solution and the structural characteristics of the analytes.     

Propanoyl ion formation from metastable [C3H6O]+˙ ions

Collisionally activated spectra demonstrate that CH₃CH₂C?O⁺ rather than \documentclass{article}\pagestyle{empty}\begin{document}${\rm CH}_{\rm 2} = {\rm CHCH = }\mathop {\rm O}\limits^{\rm + } {\rm H}$\end{document} is formed in the metastable losses of hydrogen from [C₃H₆O]^+˙ ions with the oxygen on the first carbon. This provides another example of formation of an acyl ion following ‘ketonization’ prior to metastable decomposition.     

On the unimolecular loss of acetylene from metastable C11H9]+ ions

Extensive ¹³C labelling experiments demonstrate that loss of acetylene from metastable [C₁₁H₉]⁺ ions is a complex process, which can be described quantitatively in terms of a four-parameter model. The major reaction path (77.8%) involves scrambling of all 11 carbon atoms. Insight into the reaction details is provided neither by the kinetic energy release associated with the reaction [C₁₁H₉]⁺ → [C₉H₇]⁺ + C₂H₂ nor by the analysis of the collisional activation mass spectra of the resulting [C₉H₇]⁺ ions.     

Structure in metastable peaks arising from reactions in which[C3H3]+ ions are produced

The metastable peak resulting from the fragmentation of [C₇H₇]²⁺? ions fram a variety of sources shows structure due to the presence of two reactions releasing different amounts of translational energy. The translational energy differences has been measured as 0.52 ± 0.04eV and is thought to be due to the formation of product ions of different structure via competing reactions from a single transition state. The possible structures of these ions are discussed, and it is proposed that the effect observed is due to the formation of [C₃H₃]⁺ ions in two forms, cyclopropenyl and proparg1. The metastable singly charged ions which also lead to product ions of formula [C₃H, ₃]⁺.     

Decompositions of metastable [C6H12O]+ ions with the oxygen on the third carbon: Ring-size preferences in [CnH2nO]+˙ ions

The isomerizations preceding the metastable decompositions in the mass spectrometer of a number of [C₆H₁₂O]⁺˙ ions with the oxygen on the third carbon are characterized utilizing deuterium labeling. Hydrogens are transferred in these ions by three-, five- and six-membered ring rearrangements, with propensities determined by features of the individual reactions. Three-membered ring hydrogen transfers between α and β-carbons are preferred to all five-membered ring hydrogen transfers. However, six-membered ring hydrogen transfers take place to the apparent exclusion of three-membered ring hydrogen transfers to enol carbons when the products are of comparable stability. The low-energy [C₆H₁₂O]⁺˙ isomerizations characterized are predictable from the behavior of their lower homologs. It is concluded that the determinants of these reactions are the same as those of other highly reactive organic intermediates.     

Collision-induced decompositions of [M – H]− and [M + Li]+ ions from fast atom bombardment of dinucleoside phenylphosphonates

The collision-induced decompositions of the [M – H]^? and [M + Li]⁺ ions of a few dinucleoside phenylphosphonates were studied using fast atom bombardment and linked scanning at constant B/E. Deprotonation takes place on the base or sugar moieties. The [M – H]^? ion decomposes mainly by cleavage on either side of the phosphonate linkage, leading to the formation of mononucleotide fragment ions and also by cleavage of the basesugar bond. Rupture of the 3′-phosphonate bond is preferred. Unlike the normal charged nucleotides, these neutral nucleotides do not eliminate a neutral base from the [M – H]^? ion. However, the mononucleotide fragment ions which can have the charge on the phosphorus oxygen eliminate neutral bases by charge-remote fragmentation. The 4,4′-dimethoxytrityl (DMT)-protected nucleotides show the additional fragmentation of loss of DMT. Li⁺ attachment can occur at several sites in the molecule. As observed for the [M – H]^? ion, the major cleavage occurs on either side of the phosphonate bond in the fully deprotected nucleotides, cleavage of the ester bond on C(3′) being preferred. Cleavage of the 5′-phosphonate bond is not observed in the DMT-protected nucleotides. Many of the fragmentations observed can be explained as arising from charge-remote reactions.     

Energy partitioning in the metastable fragmentation [C3H7]+ → [C3H5]+ + H2

The dish-topped metastable peak for the fragmentation [C₃H₇]⁺ → [allyl]⁺ + H₂ is generated by the threshold fragmentation. The fraction of the reverse activation energy which is partitioned as translational energy of the products is 0.9 ± 0.1. It is proposed that a similar partitioning coefficient applies to the excess internal energy above threshold.