Generalized principle of corresponding states and the scale invariant mean-field approach

In this paper we apply the relations between the critical points of the Lennard-Jones fluids and lattice gas model found in [V. L. Kulinskii, J. Phys. Chem. B 114, 2852 (2010)] to other short-ranged potentials like Buckingham and the Mie-potentials. The estimates for the corresponding critical point loci correlate quite satisfactory with the available numerical data for these potentials. The explanation for the correlation between the value of the second virial coefficient at the critical temperature and the particle volume found in [G. A. Vliegenthart and H. N. W. Lekkerkerker, J. Chem. Phys. 112, 5364 (2000)] is proposed. The connection of the stability of the liquid phase with the short range character of the potentials is discussed on the basis of the global isomorphism approach.     

Polarizable and flexible model for ethanol

A polarizable, flexible model for ethanol is obtained based on an extensive series of B3LYP/6-311++G(d,p) calculations and molecular dynamics simulations. The ethanol model includes electric-field dependence in both the atomic charges and the intramolecular degrees of freedom. Field-dependent intramolecular potentials have been attempted only once previously, for OH and HH stretches in water [P. Cicu et al., J. Chem. Phys. 112, 8267 (2000)]. The torsional potential involving the hydrogen-bonding hydrogen in ethanol is found to be particularly field sensitive. The methodology for developing field-dependent potentials can be readily generalized to other molecules and is discussed in detail. Molecular dynamics simulations of bulk ethanol are performed and the results are assessed based on comparisons with the self-diffusion coefficient [N. Karger et al., J. Chem. Phys. 93, 3437 (1990)], dielectric constant [J. T. Kindt and C. A. Schmuttenmaer, J. Phys. Chem. 100, 10373 (1996)], enthalpy of vaporization [R. C. Wilhoit and B. J. Zwolinski, J. Phys. Chem. Ref. Data, Suppl. 2, 2 (1973)], and experimental interatomic distributions [C. J. Benmore and Y. L. Loh, J. Chem. Phys. 112, 5877 (2000)]. The simultaneous variation of the atomic charges and the intramolecular potentials requires modified equations of motion and a multiple time step algorithm has been implemented to solve these equations. The article concludes with a discussion of the bulk structure and properties with an emphasis on the hydrogen bonding network.     

Predicting adsorption isotherms using a two-dimensional statistical associating fluid theory

A molecular thermodynamics approach is developed in order to describe the adsorption of fluids on solid surfaces. The new theory is based on the statistical associating fluid theory for potentials of variable range [A. Gil-Villegas et al., J. Chem. Phys. 106, 4168 (1997)] and uses a quasi-two-dimensional approximation to describe the properties of adsorbed fluids. The theory is tested against Gibbs ensemble Monte Carlo simulations and excellent agreement with the theoretical predictions is achieved. Additionally the authors use the new approach to describe the adsorption isotherms for nitrogen and methane on dry activated carbon.     

The nature of the calculation of the pressure in molecular simulations of continuous models from volume perturbations

We consider some fundamental aspects of the calculation of the pressure from simulations by performing volume perturbations. The method, initially proposed for hard-core potentials by Eppenga and Frenkel [Mol. Phys.52, 1303 (1984)] and then extended to continuous potentials by Harismiadis et al. [J. Chem. Phys. 105, 8469 (1996)], is based on the numerical estimate of the change in Helmholtz free energy associated with the perturbation which, in turn, can be expressed as an ensemble average of the corresponding Boltzmann factor. The approach can be easily generalized to the calculation of components of the pressure tensor and also to ensembles other than the canonical ensemble. The accuracy of the method is assessed by comparing simulation results obtained from the volume-perturbation route with those obtained from the usual virial expression for several prototype fluid models. Monte Carlo simulation data are reported for bulk fluids and for inhomogeneous systems containing a vapor-liquid interface.     

Interfacial energy and the law of corresponding states 2: associated fluids

A mesoscopic model for the liquid/vapor interface previously developed for nonpolar fluids [J. Phys. Chem. A 2003, 107, 875; 2003, 107, 883] is extended to the case of polar associated compounds. The interfacial energy is factorized in two terms: one corresponding to association depending on the hydrogen bonds density, the other corresponding to the nonpolar contribution. This last term is treated in the framework of the corresponding states formalism similar to the one used in the case of nonpolar fluids [J. Phys. Chem. B 2004, 108, 5951]. The model yields a generalized behavior of the association factor as a function of the dielectric constant for the treated fluids. The calculated surface tension shows a mean error of about 1% for seven compounds having different multivalent H-bond characters.     

Density functional theory of adsorption of mixtures of charged chain particles and spherical counterions

We propose a microscopic density functional theory to describe nonuniform ionic fluids composed of chain molecules with charged "heads" and spherical counterions. The chain molecules are modeled as freely jointed chains of hard spheres, the counterions are oppositely charged spheres of the same diameter as all segments of chain molecules. The theory is based on the approach of Yu and Wu [J. Chem. Phys. 117, 2368 (2002)] of adsorption of chain molecules and on theory of adsorption of electrolytes [O. Pizio, A. Patrykiejew, and S. Sokolowski, J. Chem. Phys. 121, 11957 (2004)]. As an application of the proposed formalism we investigate the structure and adsorption of fluids containing segments of different length in a slitlike pore.     

Direct correlation function for complex square barrier-square well potentials in the first-order mean spherical approximation

The direct correlation function of the complex discrete potential model fluids is obtained as a linear combination of the first-order mean spherical approximation (FMSA) solution for the simple square well model that has been reported recently [Hlushak et al., J. Chem. Phys. 130, 234511 (2009)]. The theory is employed to evaluate the structure and thermodynamics of complex fluids based on the square well-barrier and square well-barrier-well discrete potential models. Obtained results are compared with theoretical predictions of the hybrid mean spherical approximation, already reported in the literature [Guillen-Escamilla et al., J. Phys.: Condens. Matter 19, 086224 (2007)], and with computer simulation data of this study. The compressibility route to thermodynamics is then used to check whether the FMSA theory is able to predict multiple fluid-fluid transitions for the square barrier-well model fluids.     

Phase diagram of complex fluids using an efficient integral equation method

We present an adaptive technique for the determination of the phase diagram of fluids within the integral equation theory. It enables an efficient and accurate systematic mapping of the thermodynamic space in order to construct the binodal and spinodal lines. Results are obtained with the thermodynamically consistent integral equation proposed by Sarkisov [J. Chem. Phys. 114, 9496 (2001)] within the tangent linear technique that yields an exact differentiation of correlation functions. The generality of the numerical approach is assessed by determining both the liquid-vapor coexistence and the critical parameters of the generalized Lennard-Jones (n,6) potentials with varying repulsive part, including the hard-sphere limit.     

Towards an understanding of many-particle effects in hydrophobic association in methane solutions

This paper applies the multiscale coarse-graining method [S. Izvekov and G. A. Voth, J. Phys. Chem. B 109, 2469 (2005); J. Chem. Phys. 123, 134105 (2005)] to analyze many-body effects in concentrated methane solutions. Pairwise decompositions of N-particle solute-solute potentials of mean force (PMFs), and the respective solvent cavity potentials, enthalpic, entropic, and heat capacity of hydrophobic association, are calculated directly from unconstrained molecular-dynamics simulations of methane solutions at different molar fractions, with the highest being 0.055. The many-body effects in hydrophobic hydration are further studied using N-methane PMFs, which are explicitly dependent on solvent coordinates.     

Effective local potentials for excited states

The constrained variational Hartree-Fock method for excited states of the same symmetry as the ground state [Chem. Phys. Lett. 287, 189 (1998)] is combined with the effective local potential (ELP) method [J. Chem. Phys. 125, 081104 (2006)] to generate Kohn-Sham-type exact-exchange potentials for singly excited states of many-electron systems. Illustrative examples include the three lowest (2)S states of the Li and Na atoms and the three lowest (3)S states of He and Be. For the systems studied, excited-state ELPs differ from the corresponding ground-state potentials in two respects: They are less negative and have small additional "bumps" in the outer electron region. The technique is general and can be used to approximate excited-state exchange-correlation potentials for other orbital-dependent functionals.     

First-order mean spherical approximation for inhomogeneous fluids

The first-order mean-spherical approximation (FMSA) [Y. Tang, J. Chem. Phys., 118, 4140 (2003)] is extended to the studies of inhomogeneous fluids by combining with Rosenfeld's perturbative method [Y. Rosenfeld, J. Chem. Phys. 98, 8126 (1993)]. In the extension, the key input-direct correlation function of FMSA-is applied to constructing the free energy density functional. Preserving its high fidelity at the bulk limit, the FMSA shows satisfactory performance for Yukawa fluids near hard and attractive walls. The results are better than or comparable to several other theories reported before for the geometry. The FMSA is found, in particular, more satisfactory than the traditional mean-field theory for predicting density profiles around hard walls. The FMSA is also compared with the full MSA for inhomogeneous fluids, showing no appreciable differences. The inhomogeneous FMSA goes successfully through the self-consistency test for reproducing the radial distribution function of the bulk Yukawa fluid. As far as the computation is concerned, the FMSA can be executed much faster than any nonmean-field theories, and the speed is virtually identical to that of the mean-field theory.     

Simulation of vibrational dephasing of I(2) in solid Kr using the semiclassical Liouville method

In this paper, we present simulations of the decay of quantum coherence between vibrational states of I(2) in its ground (X) electronic state embedded in a cryogenic Kr matrix. We employ a numerical method based on the semiclassical limit of the quantum Liouville equation, which allows the simulation of the evolution and decay of quantum vibrational coherence using classical trajectories and ensemble averaging. The vibrational level-dependent interaction of the I(2)(X) oscillator with the rare-gas environment is modeled using a recently developed method for constructing state-dependent many-body potentials for quantum vibrations in a many-body classical environment [J. M. Riga, E. Fredj, and C. C. Martens, J. Chem. Phys. 122, 174107 (2005)]. The vibrational dephasing rates gamma(0n) for coherences prepared between the ground vibrational state mid R:0 and excited vibrational state mid R:n are calculated as a function of n and lattice temperature T. Excellent agreement with recent experiments performed by Karavitis et al. [Phys. Chem. Chem. Phys. 7, 791 (2005)] is obtained.     

An ab initio investigation of the O(3P)-H2(1sigma(g)+) van der Waals well

We report an ab initio study of the van der Waals region of the O(3P)-H2 potential energy surface based on RCCSD(T) calculations with an aug-cc-pVQZ basis supplemented by bond functions. In addition, an open-shell implementation of symmetry-adapted perturbation theory (SAPT) is used to corroborate the RCCSD(T) calculations and to investigate the relative magnitudes of the various contributions to the van der Waals interaction. We also investigate the effect of the spin-orbit coupling on the position and depth of the van der Waals well. We predict the van der Waals minimum to occur in perpendicular geometry, and located at a closer distance than a secondary well in colinear geometry. The potentials obtained in the present study confirm the previous calculations of Alexander [M. H. Alexander, J. Chem. Phys., 1998, 108, 4467], but disagree with the earlier work of Harding and co-workers [Z. Li, V. A. Apkarian and L. B. Harding, J. Chem. Phys., 1997, 106, 942] as well as with recently refitted surfaces of Brand?o and coworkers [J. Brand?o, C. Mogo and B. C. Silva, J. Chem. Phys., 2004, 121, 8861]. Inclusion of spin-orbit coupling reduces the depth of the van der Waals minimum without causing a change in its position.     

Test-area simulation method for the direct determination of the interfacial tension of systems with continuous or discontinuous potentials

A novel test-area (TA) technique for the direct simulation of the interfacial tension of systems interacting through arbitrary intermolecular potentials is presented in this paper. The most commonly used method invokes the mechanical relation for the interfacial tension in terms of the tangential and normal components of the pressure tensor relative to the interface (the relation of Kirkwood and Buff [J. Chem. Phys. 17, 338 (1949)]). For particles interacting through discontinuous intermolecular potentials (e.g., hard-core fluids) this involves the determination of delta functions which are impractical to evaluate, particularly in the case of nonspherical molecules. By contrast we employ a thermodynamic route to determine the surface tension from a free-energy perturbation due to a test change in the surface area. There are important distinctions between our test-area approach and the computation of a free-energy difference of two (or more) systems with different interfacial areas (the method of Bennett [J. Comput. Phys. 22, 245 (1976)]), which can also be used to determine the surface tension. In order to demonstrate the adequacy of the method, the surface tension computed from test-area Monte Carlo (TAMC) simulations are compared with the data obtained with other techniques (e.g., mechanical and free-energy differences) for the vapor-liquid interface of Lennard-Jones and square-well fluids; the latter corresponds to a discontinuous potential which is difficult to treat with standard methods. Our thermodynamic test-area approach offers advantages over existing techniques of computational efficiency, ease of implementation, and generality. The TA method can easily be implemented within either Monte Carlo (TAMC) or molecular-dynamics (TAMD) algorithms for different types of interfaces (vapor-liquid, liquid-liquid, fluid-solid, etc.) of pure systems and mixtures consisting of complex polyatomic molecules.     

Computer simulation study of metastable ice VII and amorphous phases obtained by its melting

Molecular dynamics simulations of metastable ice VII and cubic ice Ic are carried out in order to examine (1) the ability of commonly used water interaction potentials to reproduce the properties of ices, and (2) the possibility of generating low-density amorphous (LDA) structures by heating ice VII, which is known to transform to LDA at approximately 135 K at normal pressure [S. Klotz, J. M. Besson, G. Hamel, R. J. Nelmes, J. S. Loveday, and W. G. Marshall, Nature (London) 398, 681 (1999)]. We test four simple empirical interaction potentials of water: TIP4P [W. L. Jorgensen, J. Chandrasekhar, J. D. Madura, R. W. Impey, and M. L. Klein, J. Chem. Phys. 79, 926 (1983)], SPC/E [H. J. C. Berendsen, J. R. Grigera, and T. P. Straatsma, J. Phys. Chem. B 91, 6269 (1987)], TIP5P [M. W. Mahoney and W. L. Jorgensen, J. Chem. Phys. 112, 8910 (2000)], and ST2 [F. H. Stillinger and A. Rahman, J. Chem. Phys. 60, 1545 (1974)]. We have found that TIP5P ice VII melts at 210 K, TIP4P at 90 K, and SPC/E at 70 K. Only TIP5P water after transition has a structure similar to that of LDA. TIP4P and SPC/E have almost identical structures, dissimilar to any known water or amorphous phases, but upon heating both slowly evolve towards LDA-like structure. ST2 ice VII is remarkably stable up to 430 K. TIP4P and SPC/E predict correctly the cubic ice collapse into a high-density amorphous ice (HDA) at approximately 1 GPa whereas TIP5P remains stable up to approximately 5 GPa. The densities of the simulated ice phases differ significantly, depending on the potential used, and are generally higher than experimental values. The importance of proper treatment of long-range electrostatic interactions is also discussed.     

A density-functional approach to polarizable models: a Kim-Gordon response density interaction potential for molecular simulations

A combined linear-response-frozen electron-density model has been implemented in a molecular-dynamics scheme derived from an extended Lagrangian formalism. This approach is based on a partition of the electronic charge distribution into a frozen region described by Kim-Gordon theory [J. Chem. Phys. 56, 3122 (1972); J. Chem. Phys. 60, 1842 (1974)] and a response contribution determined by the instantaneous ionic configuration of the system. The method is free from empirical pair potentials and the parametrization protocol involves only calculations on properly chosen subsystems. We apply this method to a series of alkali halides in different physical phases and are able to reproduce experimental structural and thermodynamic properties with an accuracy comparable to Kohn-Sham density-functional calculations.     

Recovering the Crooks equation for dynamical systems in the isothermal-isobaric ensemble: a strategy based on the equations of motion

The Crooks equation [Eq. (10) in J. Stat. Phys. 90, 1481 (1998)] relates the work done on a system during a nonequilibrium transformation to the free energy difference between the final and the initial state of the transformation. Recently, the authors have derived the Crooks equation for systems in the canonical ensemble thermostatted by the Nose-Hoover or Nose-Hoover chain method [P. Procacci et al., J. Chem. Phys. 125, 164101 (2006)]. That proof is essentially based on the fluctuation theorem by Evans and Searles [Adv. Phys. 51, 1529 (2002)] and on the equations of motion. Following an analogous approach, the authors derive here the Crooks equation in the context of molecular dynamics simulations of systems in the isothermal-isobaric (NPT) ensemble, whose dynamics is regulated by the Martyna-Tobias-Klein algorithm [J. Chem. Phys. 101, 4177 (1994)]. Their present derivation of the Crooks equation correlates to the demonstration of the Jarzynski identity for NPT systems recently proposed by Cuendet [J. Chem. Phys. 125, 144109 (2006)].     

Hybrid one-electron/many-electron methods for ionized states of molecular clusters

To describe singly-ionized states of molecular clusters we devised an effective Hamiltonian approach that combines (1) accurate monomer ionization potentials from many-electron wave functions with (2) polarization shifts and (3) effective monomer couplings obtained from a simple one-electron approach (the superposition-of-fragment-states (SFS) method [Valeev et al., J. Am. Chem. Soc., 2006, 128, 9882]). The accuracy of the intermolecular coupling parameters evaluated with SFS Hartree-Fock (HF) and Density-Functional-Theory (DFT) variants was evaluated for several weakly-bound dimers and compared against the state-of-the-art equation-of-motion ionization-potential coupled-cluster singles and doubles (EOM-IP-CCSD) data of Krylov and co-workers. The SFS-HF method produces coupling integrals accurate to a few percent, whereas SFS-DFT predictions are substantially worse. A hybrid approach combining SFS-HF couplings and shifts with EOM-IP-CCSD ionization potentials of monomers (denoted as SFS-EOM-IP-CCSD) was applied to ionized states of two conformers of a benzene dimer and ten representative DNA base pairs. The 16 considered SFS-EOM-IP-CCSD ionization potentials of the benzene dimer differed from the reference EOM-IP-CCSD IPs of Krylov and co-workers [Pieniazek et al., J. Chem. Phys. 2007, 127, 044317; Bravaya et al., Phys. Chem. Chem. Phys. 2010, 12, 2261] by less than 0.1 eV on average, and at most by 0.2 eV. For the DNA base pairs the mean absolute (median) deviation of the SFS-EOM-IP-CCSD IPs was 0.27 (0.23) eV; several deviations for non-Koopmans states were as large as 0.9 eV. The SFS-EOM-IP-CCSD method can be readily applied to large molecular clusters with computational effort scaling cubically with the size of the cluster.     

The photodissociation of the water dimer in the A band: a twelve-dimensional quasiclassical study

The quasiclassical absorption spectrum of the water dimer in the A band was calculated taking into account motion in all degrees of freedom of the system. The ab initio excited state potentials employed were interpolated by the modified Shepard interpolation method using QMRCI energies and state-averaged MCSCF gradients and Hessians. The ground state vibrational wavefunction was variationally calculated using an adiabatic separation between the high and low frequency normal modes of the system. The calculated spectrum of water dimer shows a clear blueshift with respect to the monomer, but also a small red tail, in agreement with the prediction by Harvey et al. [J. Chem. Phys. 109, 8747 (1998)]. Previous three-dimensional model studies of the photodissociation of the water dimer by Valenzano et al. [J. Chem. Phys. 123, 034303 (2005)] did not show this red tail. A thorough analysis of the dependence of the spectrum on the modes coupled explicitly in the calculation of the spectrum shows that the red tail is due to coupling between the intramolecular stretch vibrations on different monomers.