FICA,a new chiral derivatizing agent for determining the absolute configuration of secondary alcohols by 19F and 1H NMR spectroscopies

Optically active 1-fluoroindan-1-carboxylic acid (FICA) was designed and prepared as its methyl ester for determining the absolute configuration of chiral molecules by both ¹H and ¹⁹F NMR spectroscopies. Enantiomerically pure isomers of FICA methyl esters (FICA Me esters) were obtained by chromatographic separation using HPLC with a Daicel Chiralcel OJ-H column. The absolute configuration of the (+)-FICA Me ester was deduced to be (S) by X-ray crystallographic analysis of the (+)-FICA amide of (R)-α-phenethylamine. Both enantiomers were derived to the diastereomeric esters of chiral secondary alcohols by an ester exchange reaction. In the ¹H NMR spectra, the signs of Δδ_H (δ_R ? δ_S) were consistent on each side of the FICA molecular plane. Therefore, the concept of the modified Mosher’s method could be successfully applied to the FICA-based procedure. Moreover, the consistency in the signs of Δδ_F (δ_R ? δ_S) values suggests that the FICA method would be reliable in assigning the absolute configurations of secondary alcohols based on ¹⁹F NMR spectroscopy.     

1H- und 13C-NMR-Untersuchungen zur Struktur N-substituierter Tetrazole—Die Strukturen des N-Methoxycarbonyl-, N-Acetyl- und N-(Tri-n-butylstannyl)-tetrazols sowie Substituenteneffekte auf δ13C und 1J(CH)

The ¹H and ¹³C NMR spectra of several isomeric N-substituted tetrazoles have been investigated. ¹³C NMR is shown to be more useful for distinguishing between structural isomers of N-substituted tetrazoles except for those carrying electropositive substituents like SnBu₃. Correlations of δC-5 (inverse) and ¹J(C-5,H) with s?₁ found for 1-substituted tetrazole allowed the identification of the N SnBu₃ derivative as 1-(tri-n-butylstannyl)tetrazole. The phenyl carbon chemical shift difference ΔC′ = δC-3′-δC-2′ is insignificant for structure elucidation and conformational studies of N-substituted 5-phenyltetrazoles; ΔH′ from ¹H NMR spectra seems to be more useful.     

2-Methoxy-2-(1-naphthyl)propionic acid,a powerful chiral auxiliary for enantioresolution of alcohols and determination of their absolute configurations by the 1H NMR anisotropy method

Racemic 2-methoxy-2-(1-naphthyl)propionic acid (1, MαNP acid) was enantioresolved as its esters derived from various chiral alcohols. For example, a diastereomeric mixture of esters prepared from (±)-1 and (1R,3R,4S)-(−)-menthol was easily separated by HPLC on silica gel yielding esters (−)-2a and (−)-2b, the separation factor α=1.83 being unusually large. The ¹H NMR chemical shift differences, Δδ=δ(R)–δ(S), between diastereomers 2a and 2b, are much larger than those of conventional chiral auxiliaries, e.g. Mosher’s MTPA and Trost’s MPA acids. This acid 1 is therefore very powerful for determining the absolute configuration of chiral alcohols by the ¹H NMR anisotropy method. Solvolysis of the separated esters yielded enantiopure acids (S)-(+)-1 and (R)-(−)-1, which are useful for enantioresolution of racemic alcohols.     

Absolute configuration of diterpenoid diacylglycerols from the Antarctic nudibranch Austrodoris kerguelenensis

The R absolute configuration at C-2′ of the glyceryl moiety of the natural diterpenoid 1,3-glyceryl esters 1 and 2 has been established by applying the modified Mosher method. These esters have been isolated, together with the corresponding 1,2-derivatives (3 and 4), from different collections of the Antarctic dorid nudibranch Austrodoris kerguelenensis. Surprisingly, such a configuration is opposite to that of all marine terpenoid diacylglycerols so far reported. Compounds 1 and 3 are new natural products closely related to austrodorin 5, already described from the same species.     

NMR确定手性α-羟基酮的绝对构型

本文采用该方法将α 羟基酮分别与(R)和(S)-2-甲氧基-2-苯基-2-三氟甲基乙酸(MTPA)反应, 得到(S)和(R)-Mosher酯, 再分别测定其 1H NMR谱, 通过计算化学位移差值确定其绝对构型.     

Investigation of Substituent Effects on Proton and Carbon-13 Chemical Shifts of 4-Substituted Trans-Stilbenes

Proton and carbon-13 chemical shifts of para-substituted stilbenes have been measured. ¹H-¹H, ¹H-¹³C COSY spectra were obtained to analyze unambiguously the chemical shifts of protons and carbons. A long range coupling between 2-H and α-H was observed in a ¹H-¹H COSY spectrum. The observed chemical shifts have been correlated with Hammett substituent parameters. Among ethenyl protons and carbons, all but the chemical shifts of α-H show good correlation with both dual substituent parameters and single substituent parameters. In addition to this finding, the excellent linear correlations of C-l, and 4′-H of 4-substituted trans-stilbenes are also reported. Besides the correlations of chemical shifts with Hammett parameters, a good correlation between the chemical shifts and the calculated charges of position C-4′ are reported.     

Observing the enantiomeric 1H chemical shift non-equivalence of several α-amino ester signals using tris[3-(trifluoromethylhydroxymethylene)-(+)-camphorato]samarium(III): a chiral lanthanide shift reagent that causes minimal line broadening

The chiral lanthanide shift reagent, tris[3-(trifluoromethylhydroxymethylene)-(+)-camphorato]samarium(III) [Sm(tfc)₃], was shown to resolve the ¹H NMR signals of the enantiomers of α-amino esters without causing serious line broadening. This distinctive feature of Sm(tfc)₃ made it possible to examine the enantiomeric chemical shift non-equivalence of several protons in ester substrates, increasing the reliability of the empirical assignment of the absolute configuration as compared to earlier techniques.     

An Air- and Water-Stable Hydrogen-Bond-Donor Catalyst for the Enantioselective Generation of Quaternary Carbon Stereocenters by Additions of Substituted Cyanoacetate Esters to Acetylenic Esters

The chiral enantiopure cobalt(III) complex Δ-[Co((S,S)-dpen)₃]³⁺ 2Cl⁻B(C₆F₅)₄⁻ (Δ-(S,S)- 2 ³⁺ 2Cl⁻B(C₆F₅)₄⁻; dpen=1,2-diphenylethylenediamine) is an effective catalyst, together with pyridine (10 mol % each), for enantioselective additions of substituted cyanoacetate esters NCCH(R)CO₂R′ to acetylenic esters R′′C≡CCO₂R′′′. In the resulting adducts NC(R′O₂C)C(R)CR′′C=CHCO₂R′′′, C=C isomers in which the CO₂R′′′ moiety is trans to the new carbon–carbon bond dominate (avg. ratio 98:2). These are obtained in 70–98 % ee (avg. 86 %; data for optimum R′ and R′′′), as determined by ¹H NMR with the chiral solvating agent Λ-(S,S)- 2 ³⁺ 2I⁻B(3,5-C₆H₃(CF₃)₂)₄⁻. NMR experiments show that the cyanoacetate and acetylenic esters and pyridine can hydrogen bond to certain NH groups of the catalyst. Rates are zero order in the cyanoacetate and acetylenic esters as well as the catalyst, and implications are discussed.     

Konformationsanalyse und Diastereomerenzuordnung an 1,3-Aza- und 1,3-Oxaphospholanen mittels paramagnetischer Verschiebung

The geometric factor G [G = (3 cos² θ ?1) r^?3] of selected protons relative to a centre of co-ordination [Eu(dpm)₃] is determined using Dreiding models of different conformers of 1,3-aza- and 1,3-oxaphospholanes. The centre of co-ordination is supposed to be joined to the oxygen of the carbonyl group or to the nitrogen and oxygen in the hetero-ring, respectively. The graphs of the geometric factors against the paramagnetic shifts of the relevant protons are straight lines only for the preferred conformers on the basis of a correct centre of co-ordination. As a measure for the paramagnetic shift of a proton the slope of the graph of chemical shift against the concentration of Eu(dpm)₃ (in mol %) is chosen. By variation of the relative configuration at C-5 in the models and calculation of the geometric factor, it is possible to determine the different diastereomers, which are distinguished by the relative position of the substituent at phosphorus and C-5.     

13C nuclear magnetic resonance spectroscopy of selected adenine nucleosides: Structural correlation and conformation about the glycosidic bond

Structural correlations have been carried out from ¹³C chemical shifts (δ) and by analysis of ¹J(CH) coupling constants, and the conformation about the glycosidic bond has been studied by means of the ³J(CH) vicinal coupling constants between C-8 and H-1′ of some adenine nucleosides such as adenosine (Ado), N(7)-β-D-ribofuranosyladenine (N(7)-Ado), N(9)- and N(7)-β-D-xylofuranosyladenine (N(9)-xylAde and N(7)-xylAde), N(9)-(3-chloro-3-deoxy-β-D-xylofuranosyl)adenine (3′-Cl-xylAde) and N(9)-(2-chloro-2-deoxy-β-D-arabinofuranosyl)adenine (2′-Cl-araAde). The analysis of the influence on δ¹³C of the nature and configuration of the substituent in the carbohydrate fragment of the molecule has revealed two types of effects, namely, 1,2-cis and 1,2-trans. This approach, as well as the ³J(CH) values and the analysis of the C-3′-endo?C-2′-endo equilibrium of the carbohydrate fragment of nucleosides, and circular dichroism (CD) data, provides important information on the conformation about the glycosidic bond. The magnitudes of ³J(C-4, H) are indicative of the position of attachment of the carbohydrate fragment to the heterocyclic base.     

Syntheses of (R) [4-2H2] 2-Amino-3-Butenoic Acid (Vinylglycine) and (R) [4-2H2, 5-2H3] Methionine

Treatment of (R) methionine sulfoxide with NaOD led to exchange of the C-4 methylene and C-5 methyl protons; exchange of the chiral C-2 proton did not occur. Reducation with mercaptoacetic acid gave (R)-[4-²H₂, 5-²H₃] methionine. The latter was converted into its carbobenzyloxy methyl ester sulfoxide, pyrolysis of which followed by deprotection yielded (R)-[4-²H₂] vinylglcine as the hydrochloride.     

Alnumycins A2 and A3: new inverse-epimeric pairs stereoisomeric to alnumycin A1

Two new pairs of stereoisomeric alnumycin As, A2 {(2)-(1R,1′RS,4′SR,5′SR)} and A3 {(2)-(1R,1′RS,4′SR,5′RS)}, are described. Similar to alnumycin A1 {(2)-(1R,1′RS,4′RS,5′SR)}, each of these naturally occurring compounds is also a pair of C-1 inverse epimers. The relative configurations of the dioxane ring sidechains were assigned on the basis of ¹H NMR NOE contacts and molecular modeling using density functional theory (DFT) at the M06-2X/6-31G(d) level of theory. The absolute configurations of C-1 and the determination of inverse epimeric relationships were achieved by experimental electronic circular dichroism (ECD) measurements, with both aspects confirmed by using the chiral derivatizing agent (CDA) Mosher′s acid chloride {α-methoxy-α-trifluorophenylacetyl chloride (MTPACl)} to effect enantiodifferentiation. The absolute configurations of the dioxane ring using the CDA could only be effected in the case of alnumycin A1, the results of which were in agreement with previous assignments. The dioxane ring conformational mobility and the likely interaction between the MTPA groups coupled with the structural novelty of the diols in the dioxane ring with respect to CDA analysis precluded an absolute configuration assignment for alnumycins A2 and A3 based on empirical comparisons or by computational analysis of through-space NMR shieldings (TSNMRS) emanating from the phenyl groups of the MTPA moieties.     

Recherches sur la formation et la transformation des esters LXXXII [1]. Sur la différenciation entre structures δ2-amino-2 ou imino-2 dans des composés S,N-hétérocycliques pentagonaux et hexagonaux à cycle par ailleurs saturé

Comparison of the NMR. spectra in CDCl₃ of the heterocyclic bases obtained from the cyclisation of ω-(N-thiocarbamoylamino) ethyl (or propyl)-alcohols (or their orthophosphoric or sulfuric monoesters) to those of model compounds II (n = 1 or 2) and III (n = 1 or 2) has shown that: (1) In the case of five membred rings the C?N double bond is always endocyclic (Ib, n = 1) should R be aromatic, araliphatic or aliphatic; (2) In the case of six membered rings the C?S double bond is cnclocyclic when R is aliphatic or araliphatic (Ib, n = 2), and exocyclic when R is aromatic (I a, n = 2), with the exception of 2-(o-carboxyphcnylamino)-dihydro-δ²-m (Ib, n = 2, K = o-carboxyphcnyle). In CF, COOH, all five membered rings (I b, n = 1) show a triplet for the C-4 methylenic protons, whereas all the six membered rings (Ia or I b, n = 2) with the exception of I b, n = 2, R = o-carboxyphenyle, are represented b y a double triplet for the C-4 protons (samt. protonated spccics). Only one triplet is observed when the 3 position is substituted. Thiocarbamoylation of hydrazinoethanol or its orthophosphoric or sulfuric monoesters canoccur at either of the two nitrogen atoms, thus yielding upon cyclization five- (IT′) or six-membered rings (Va or Vb). The NMR spectra of compounds I V in (CIl,), SO show a singlet for 2 amino pro-tons (3-amino) and there is no further structural problem. The NMR spectra of compounds T′ in (CT), SO show a triplet for one amino proton coupling with the neighboring methylenic protons. I n this case, mode1 compounds are needed to assign the position of the C?N double bond ( e x cyclic V a or cndocyclic V b). When R = o-carboxyphenylc, the C?N double bond is probably endoc, yclic (Vb) because this ccimpound and 2-(o-carboxyphenvlarnino)-dihydro-δ² have very similar UV spectra.     

Unnatural Amino Acids. 2. Simple Method of Obtaining Esters of Aziridine-2-carboxylic Acids by a Transesterification Reaction

A series of N-unsubstituted esters of aziridine-2-carboxylic acid has been obtained by transesterification in basic medium using primary, secondary, and tertiary alcohols. Methods of transesterification using various bases (K₂CO₃, ROLi, t-BuOK) have been compared. Transesterification with lithium alcoholates also affords the possibility of obtaining esters of N-substituted aziridine-2-carboxylic acids. Transesterification of chiral esters proceeds with retention of the configuration of the chiral center.     

Biotransformation of (+)-isofraxinellone by Aspergillus niger and insect antifeedant activity

The biotransformation of (+)-isofraxinellone (1) by Aspergillus niger was investigated. Compound 1 was transformed to only one new compound 2. The structure of 2 was identified as (-)-(4S)-4-hydroxyisofraxinellone which was regio- and stereo-selective hydroxylated at the C-4 position by IR, EI-MS 1D and 2D NMR. Absolute configuration of hydroxyl group at the C-4 position was detected by modified Mosher’s method. Antifeedant activity of compounds 1 and 2 against larvae of Spodoptera litura was assayed. These compounds showed potent antifeedant activity and ED₅₀ (50% of effective dose) values were 3.91 and 4.43 μg/cm², respectively.     

Perhydroxylated 1,7-Dioxaspiro[5.5]undecanes (“Spiro Sugars”): Synthesis,Stereochemistry, and Structure

As spiro sugars is an apt way of considering perhydroxylated 1,7-dioxaspiro[5.5]undecanes–a class of compounds which has not been found in nature up to now. The crystal structure of such a spiroacetal, in which the two pyran rings show the β-D -manno configuration, is depicted. Note that the all-trans arrangement of C-6, C,-5, O_pyr, C_spiro, O_pyr^′, C-5′, and C-6′ does not allow any of the stereoelectronic effects that are typical of carbohydrates.     

Stereochemistry of α,α′-difluorosuccinic acids

Treatment of both dimethyl (?)-D-tartrate (IVa) and dimethyl (+)-L- tartrate (Va) with sulfur tetrafluoride gave dimethyl meso-α,α′-difluorosuccinate (Ia). The same reagent converted dimethyl meso-tartrate (IlIa) to a racemic mixture of dimethyl D- and L-α,α′-difluorosuccinate (IIa). This outcome resulting from the replacement of hydroxyl by fluorine with inversion of configuration at one and retention of configuration at the other chiral carbon atom can be rationalized by assuming the formation of a cyclic intermediate. This is opened by a subsequent S_N2 reaction with fluoride ion followed by a four-center displacement of sulfuroxy group by fluorine. The respective configurations of the dimethyl α,α′-difluorosuccinates Ia and IIa were established by ¹H and ¹⁹F NMR using an optically active chemical shift reagent and confirmed by converting the esters to the corresponding acids and these in turn to the cis- and trans-α,α′-difluorosuccinic anhydrides, respectively.     

1H NMR spectra part 31: 1H chemical shifts of amides in DMSO solvent

The ¹H chemical shifts of 48 amides in DMSO solvent are assigned and presented. The solvent shifts Δδ (DMSO‐CDCl₃) are large (1–2 ppm) for the NH protons but smaller and negative (?0.1 to ?0.2 ppm) for close range protons. A selection of the observed solvent shifts is compared with calculated shifts from the present model and from GIAO calculations. Those for the NH protons agree with both calculations, but other solvent shifts such as Δδ(CHO) are not well reproduced by the GIAO calculations. The ¹H chemical shifts of the amides in DMSO were analysed using a functional approach for near ( ≤ 3 bonds removed) protons and the electric field, magnetic anisotropy and steric effect of the amide group for more distant protons. The chemical shifts of the NH protons of acetanilide and benzamide vary linearly with the π density on the αN and βC atoms, respectively. The C=O anisotropy and steric effect are in general little changed from the values in CDCl₃. The effects of substituents F, Cl, Me on the NH proton shifts are reproduced. The electric field coefficient for the protons in DMSO is 90% of that in CDCl₃. There is no steric effect of the C=O oxygen on the NH proton in an NH…O=C hydrogen bond. The observed deshielding is due to the electric field effect. The calculated chemical shifts agree well with the observed shifts (RMS error of 0.106 ppm for the data set of 257 entries). Copyright © 2014 John Wiley & Sons, Ltd.     

Systematical NMR analysis of swainsonine,a mycotoxin from endophytic fungus Alternaria oxytropis

Swainsonine (SW, 1 ), a unique indolizine with poly‐hydroxyl groups, was re‐isolated from the plant endophytic fungus Alternaria oxytropis. The structure (including planar structure and relative configuration) was systematically elucidated by NMR spectra (including ¹H, ¹³C, ¹H‐¹H COSY, HMQC, HMBC, and NOESY spectra in DMSO‐d₆ and in CD₃OD); ¹H NMR spectra of the modified Mosher's products were first used to determine the absolute configuration of SW. More importantly, the complex coupled features of H‐7α, H‐7β, and H‐6α in the ¹H NMR spectrum of ( 1 ) were analyzed in details, which will provide aids for the planar and relative configuration determination of analogs.