Iron gall ink-induced corrosion of cellulose: aging,degradation and stabilization. Part 2: application on historic sample material

Degradation of cellulose in historic paper by iron gall ink is a synergistic process of both, acid hydrolysis caused by acidic ink ingredients and oxidation catalyzed by free iron and/or copper ions. The interplay of both reactions was studied according to the CCOA method on historic paper samples. Only minute amounts (few mg) of the samples were required to obtain profiles of naturally present and oxidatively introduced carbonyl groups, which was done by group-selective fluorescence labeling in combination with determination of the molecular weight distribution by GPC-MALLS. In the present study naturally occurring degradation pathways in historic sample papers have been investigated. Different extents of oxidatitive degradation were shown for paper with and without ink. A typical pattern of the molecular weight distribution in naturally aged papers was identified, the peculiar feature being a distinctive shoulder in the region of low molecular weight, roughly between 25,000 and 5,000 g/mol corresponding to a DP between 150 and 30. This pattern was a typical attribute of degraded natural samples: any artificial aging procedures aimed at modeling natural aging processes must thus attempt to reproduce this feature. Although the historic samples had been more severely oxidized than model papers, the inhibition of further oxidation and hydrolysis by the calcium phytate/hydrogen carbonate treatment was evident and could be proven for the first time on the molecular level. Also on plain paper without ink application the oxidation was suppressed and the molecular weight was stabilized on a high level.     

Synergetic effect of ozone and ultrasonic radiation on degradation of chitosan

Under conditions of continuous ozone gas application and constant ultrasonic radiation (UR), chitosan was effectively degraded. The existence of a synergetic effect of ozone and ultrasonic radiation on the degradation of chitosan was demonstrated by means of determination of viscosity-average molecular weight. The efficiency of the ozone and ultrasonic radiation treatment compared with acid hydrolysis on degradation of chitosan was investigated. In addition, the structure of the degraded chitosan was characterized by FT-IR and ¹³C NMR spectral analyses. The whole initial chitosan's monomer structure still existed in the resulting degraded chitosan with different low molecular weight. The pilot study of the chemical stability of the degraded chitosan was carried out. There was no significant change of the total degree of deacetylation (DD) of degraded chitosan compared with the initial chitosan. The combined O₃/UR technique is promisingly suitable for scale-up manufacture of low-molecular-weight chitosan.     

Properties of Luminescent Si Nanoparticles in Sol-Gel Matrices

In this wor e preparation and properties of silica sol-gels incorporating luminescent Si nanocrystallites extracted from porous Si are described for the first time. These sol-gel/Si nanocrystallite composite materials are characterized by BET isotherm measurements, photoluminescence spectroscopy, and infrared spectroscopy. To stabilize the photoluminescence (PL) of Si crystallites within the silica matrix, a fatty acid (capric (C₁₀), myristic (C₁₄) or arachidic acid (C₂₀)) is added as a passivation agent during the hydrolysis of tetraethoxysilane. The presence of the fatty acid is crucial to the long-term stability of the Si nanocrystallite luminescence, as the Si visible light emission remains essentially unchanged for more than a month when the fatty acid is present in the mixture but degrades quickly (within days) when absent. The thermal stability of the Si luminescence within the sol-gel is also reported. Fluorescence microscopy reveals that the light-emitting Si crystallites aggregate into micron-sized domains somewhat unevenly throughout the silica matrix. This distribution of Si crystallites can be improved by employing a surfactant, dioctyl sodium sulfosuccinate (DSS).     

Controlled production of spruce cellulose gels using an environmentally “green” system

Stable spruce cellulose suspensions were generated in NaOH/urea aqueous solutions and used to make thermally induced gels with various swelling ratios and compressive strengths. Wood cellulose cannot be easily dissolved in water or any common organic solvent due to its high molecular weight, which largely limits its applications. Spruce cellulose was hydrolyzed by diluted sulfuric acid of various concentrations and hydrolysis times. The dissolution of these partially degraded samples was investigated in a NaOH/urea aqueous solution system considered environmentally “green.” The effects of acid hydrolysis on the structure and properties of subsequent thermally induced gels were examined using scanning electron microscopy, swelling and re-swelling experiments, and mechanical testing. The molecular weight of spruce cellulose was significantly reduced by acid hydrolysis, whereas its crystallinity slightly increased because of the removal of amorphous regions. All samples could be partially dissolved in the NaOH/urea aqueous solution and formed stable suspensions. Hydrolyzed cellulose samples with lower molecular weight exhibited a higher solubility. Rheological experiments showed these cellulose suspensions could form gels easily upon heating. A porous network structure was observed in which dissolved cellulose was physically crosslinked upon heating and then regenerated to form a three-dimensional network, where the dispersed swollen cellulose fibers filled spaces to reinforce the structure. The swelling behavior and mechanical properties of these ‘matrix-filler’ gels could be controlled by varying the mild acid hydrolysis conditions, which adjusts their degree of solubility. This research provides several opportunities for manufacturing wood cellulose based materials.     

Gel-permeation chromatographic studies of cellulose degradation. III. Methanolysis of cellulose

The molecular weight distribution in various celluloses degraded by methanolysis has been studied by gel-permeation chromatography. It is shown that the accessible portion of the sample apparently degrades preferentially into molecular fragments with a size distribution centered on species with a degree of approximately 8. This result is interpreted as indicating the presence of weak links in the cellulose chains.     

Effect of molecular orientation on the swelling of nylon 6

The effect of molecular orientation on the linear swelling of nylon 6 caused by absorption of water was studied using two kinds of oriented films, melt drawn and cold drawn. The molecular orientation causes anisotropy in swelling at all humidities such that the swelling is larger in the orientation direction than in the directions perpendicular to it. The large contribution of crystalline orientation to this phenomenon was expected for the melt drawn film which has practically no amorphous orientation. An analysis with a two-phase morphological model reveals that the distance between the crystallites is a prominent factor controlling the degree of linear swelling, and that the anisotropy of swelling arises from the change in the distribution of crystallites due to orientation. By comparing the result for the melt drawn film with that for the cold drawn film, which has considerable amorphous orientation, it was proven that molecular orientation in the amorphous phase where swelling actually occurs does not depend so much on the degree of swelling as on the distribution of crystallites.     

Influence of molecular parameters on the degradation of chitosan by a commercial enzyme

The degradative activities of neutral protease against chitosan samples with different molecular parameters were characterized. The effects of the degree of deacetylation (DD) and molecular weight (MW) of chitosan on its susceptibility to degradation were investigated. The DD and MW of the chitosans were determined using potentiometric titration and viscometry, respectively. The molecular weight distribution of initial and degraded commercial chitosan was investigated by gel permeation chromatography. Initial degradation rates (r) were determined from the plots of viscosity decrease against time of degradation. The time courses of degradation of chitosans with neutral protease were non-linear and the enzymatic hydrolysis was an endo-action. Classical Michaelis-Menten kinetic parameters were measured by analyzing the amount of reducing sugars and Eadie-Hofstee plots established that hydrolysis of chitosan by neutral protease obeyed Michaelis-Menten kinetics. Michaelis-Menten parameters and initial degradation rates were calculated and compared to determine the influences of DD and MW on hydrolysis. The results showed that higher DD and higher MW chitosans possessed a lower affinity for the enzyme and a slower degradation rate. Those samples with a lower DD and lower MW were more susceptible substrates.     

New insights into the mechanism of the Schiff base hydrolysis catalyzed by type I dehydroquinate dehydratase from S. enterica: a theoretical study

The reaction pathway of Schiff base hydrolysis catalyzed by type I dehydroquinate dehydratase (DHQD) from S. enterica has been studied by performing molecular dynamics (MD) simulations and density functional theory (DFT) calculations and the corresponding potential energy profile has also been identified. On the basis of the results, the catalytic hydrolysis process for the wild-type enzyme consists of three major reaction steps, including nucleophilic attack on the carbon atom involved in the carbon-nitrogen double bond of the Schiff base intermediate by a water molecule, deprotonation of the His143 residue, and dissociation between the product and the Lys170 residue of the enzyme. The remarkable difference between this and the previously proposed reaction mechanism is that the second step here, absent in the previously proposed reaction mechanism, plays an important role in facilitating the reaction through a key proton transfer by the His143 residue, resulting in a lower energy barrier. Comparison with our recently reported results on the Schiff base formation and dehydration processes clearly shows that the Schiff base hydrolysis is rate-determining in the overall reaction catalyzed by type I DHQD, consistent with the experimental prediction, and the calculated energy barrier of ～16.0 kcal mol(-1) is in good agreement with the experimentally derived activation free energy of ～14.3 kcal mol(-1). When the imidazole group of His143 residue is missing, the Schiff base hydrolysis is initiated by a hydroxide ion in the solution, rather than a water molecule, and both the reaction mechanism and the kinetics of Schiff base hydrolysis have been remarkably changed, clearly elucidating the catalytic role of the His143 residue in the reaction. The new mechanistic insights obtained here will be valuable for the rational design of high-activity inhibitors of type I DHQD as non-toxic antimicrobials, anti-fungals, and herbicides.     

Enhanced Hydrolytic Stability of Short‐Chain Poly[(R)‐3‐hydroxybutyrate] Conjugated to Native E. coli Cytoplasmic Proteins

Many prokaryotic and eukaryotic proteins are modified by post‐translational conjugation to short‐chain poly[(R)‐3‐hydroxybutyrate] (cPHB). The relative lability of ester bonds raises the concern that the cPHB may be substantially degraded by chemical hydrolysis during protein purification, thus increasing the difficulty of its detection and measurement. Here, we compare rates of acid‐ and base‐catalyzed hydrolysis of cPHB conjugated to native and denatured proteins at room temperature. E. coli cytoplasmic proteins, native or denatured by addition of guanidium hydrochloride, were treated with aqueous solutions of H₂SO₄ or NaOH at concentrations ranging from 0.1–2.0n . The loss of cPHB was measured as a function of time by a chemical assay. We find that cPHB conjugated to native proteins is surprisingly resistant to both acid‐ and base‐catalyzed hydrolysis, whereas cPHB conjugated to denatured proteins is proficiently degraded at rates proportional to acid or base concentration. The results suggest that cPHB occupies a highly protective environment within native proteins.     

Metal-ion-assisted hydrolysis of dipeptides involving a serine residue in a neutral aqueous solution

Dipeptides having a serine residue at the C-terminus, X-Ser, where X is an appropriate amino acid residue, were efficiently hydrolyzed in the presence of ZnCl2 at pH 7.0. The rapid hydrolysis of X-Ser is due to an autocatalysis of the hydroxy group in the serine residue, and is found to be accelerated by a metal ion, in particular by ZnCl2. Roles of the metal ion in the hydrolysis of peptides involving a serine residue, in relation to the recently reported protein cleavages, are discussed.     

Acetylation of cellulose I and II studied by limiting viscosity and X-ray diffraction

When cellulose triacetates and some hydrolyzed acetates are boiled in 2.5N hydrochloric acid there is no residue. Under the same conditions cellulose is hydrolyzed, and a residue is obtained with a limiting viscosity that is related to the average length of the cellulose crystallites. These findings are combined to develop a method for studying the progress of acetylation through the amorphous portion of cellulose and into the crystallites, and to investigate the relative reactivities of cellulose I and cellulose II. Acetates were made from cotton and wood cellulose by a “fibrous” (heterogeneous) esterification involving sulfoacetic acid or perchloric acid catalyst in acetic acid-acetic anhydride; the final acetyl contents (10–41%) were attained by stopping the reaction at various points short of the triester (rather than by hydrolyzing a triester). When these acetates were boiled in 2.5N HCI they did not disappear completely, and the residues were cellulose I, indicating that cellulose acetate had been removed. With increasing acetyl the yield of residue decreased, and beyond about 33% acetyl the viscosity and x-ray measurements showed that the length and width of the crystallites decreased. However, when a nonsolvent such as toluene was added to the acetylation medium, the limiting viscosity did not change over the same acetyl range (up to 40%). Samples of varying acetyl values were taken during a regular acetylation of cotton linters in a mixer with sulfuric acid catalyst. X-ray studies of the residues obtained by boiling the acetates in 2.5N HCI revealed the presence of unreacted cellulose I even after 40% acetyl had been reached. This explains why the manufacture of cellulose esters from cellulose I requires complete esterification before they are hydrolyzed to the desired acetyl level. It was shown that there is a distinct difference between the acetylation reactivity of cellulose I and cellulose II. This indicates the importance of avoiding cellulose II formation during the refinement of cellulose for the manufacture of cellulose acetate in a process involving activation with acetic acid.     

Preliminary studies on the processing sequence for southern red oak and municipal solid waste using a hybrid dilute acid/ enzymatic hydrolysis process for ethanol production

Based on this preliminary study, a metric ton of dry southern red oak chips subjected to a first-stage dilute sulfuric acid hydrolysis would yield 132 kg of xylose and 40 kg of glucose and mannose. A second-stage dilute sulfuric acid hydrolysis on the first-stage residue would yield only 128 kg of additional glucose, but a second-stage cellulytic enzyme hydrolysis on the first-stage residue would yield an additional 265 kg of glucose. Fermentation of these hydrolyzates would show that the hybrid process would yield over 50% more ethanol. Results on other biomass are also included.     

Cellulose crystallites

This article discusses advances in understanding the structural and physicochemical characteristics of suspensions of cellulose crystallites prepared by acid hydrolysis of natural cellulose fibres. Consideration of recent developments in visualization of crystallite ultrastructure may provide clues to suspension behavior. In addition, novel applications in a diverse range of fields are presented, from iridescent pigments to biomolecular NMR studies.     

Characterization of a Co-CoO obliquely evaporated magnetic tape by analytical electron microscopy and electron holography.

The microstructure and magnetic domain structure of a Co-CoO obliquely evaporated tape for magnetic recording are studied by analytical electron microscopy and electron holography, respectively. While the existence of Co and CoO crystallites is confirmed by energy-filtered electron diffraction, columnar structure of the Co crystallites surrounded by the densely packed CoO crystallites is visualized by an elemental mapping method with electron energy loss spectroscopy, and the crystal orientation relation among the Co crystallites is clarified by high-resolution electron microscopy. It is found that the neighboring Co crystallites have close crystal orientations. On the other hand, electron holography reveals the magnetic flux distribution in a thin section of the tape. Although there exists the background resulting from the effect of inner potential with thickness variation, the distribution of lines of magnetic flux is found to correspond well to the recorded pattern.     

Assignment of the configurations of the amino acids in peptidic siderophores

Pyoverdins and azotobactins contain beta-hydroxyaspartic acid, N delta-hydroxyornithine, citrulline and homoserine, in addition to the common protein amino acids. Configuration assignment of all of these was achieved by acid hydrolysis of the peptide, derivatization of the constituent amino acids to the N-pentafluoropropionyl amino acid esters and gas chromatographic separation of the stereoisomers on capillaries coated with Chirasil-Val. This approach is straightforward for the protein amino acids, but the less common amino acids are either partially degraded during acid hydrolysis or their derivatives exhibit unfavourable gas chromatographic properties. By judicious combination of partial and total hydrolysis and dual derivatization, these problems may be overcome.     

Monitoring thermo-oxidative degradation of polypropylene by CRYSTAF and SEC-FTIR

Samples of a polypropylene homopolymer have been degraded and analysed with regard to chemical composition, molecular weight distribution and chemical composition distribution. FTIR shows the progress of degradation and a decrease in molecular weight can be observed from SEC. CRYSTAF shows that the chemical heterogeneity of the samples broadens with continuing degradation. SEC-FTIR reveals that the degraded species are mainly found in the low molecular end of the molecular weight distribution. The spatial heterogeneity of the degradation process has been proven by the analysis of abrased layers.     

Molecular chain conformation and crystallite structure of cellulose. I. Fine structure of rayon fibers

A most reasonable folded-chain model for the fine structure of rayons (cellulose II) has been developed through experimental work on a theoretical basis. All the materials uniformly gave a levelling-off DP of about 40, equivalent to a length around 200 Å, for cellulose molecule segments at the early stage of heterogeneous acid hydrolysis when the first minor fraction is scarcely dissolved. Measurements by small-angle and wide-angle x-ray scattering put the crystallite length from various rayon fibers at about 200 Å, without exception. A family of GPC chromatograms, furthermore, on the hydrolyzed cellulose exhibited a single peak considered to represent monodispersed materials. These data suggest that clearly divided sections exist within the microfibril along its axis in a regular manner at an interval of about 200 Å. This cannot be explained in terms of the fringed micelle model. On the other hand, the possibility that cellulose II may have a folded-chain conformation has been demonstrated. A single cellulose molecule is essentially folded back and forth in the (101) plane to form a sheetlike structure. Such a structure is the basic unit that can fit perfectly into the unit cell of cellulose II. The cellulose molecule can achieve a fairly sharp U-turn in the (101) plane, with only one glucose unit of in the half-boat conformation. A crystallite consists of a number of sheets held together by secondary forces in the (101) plane. Accordingly, crystallographically, the crystallites are closely packed at the surface of each fold at its longitudinal edges to make up the cellulose microfibril. According to our model, the oxygen atom of the glucosidic link in the fold, where acid hydrolysis would have to take place, protrudes partially from the surface of the crystallite; a pair of atoms at the folds are then facing each other and are therefore, accessible for hydrolysis. This would explain chain scission of cellulose II at these sites in hydrolysis. This folded-chain model is supported further by other experimental evidence.     

Gelatinization properties of native starches and their Näegeli dextrins

Cassava, potato, sweet potato, and Peruvian carrot starches were hydrolyzed with 15% v/v sulfuric acid solution for up to 30 days. Näegeli dextrins obtained from 1, 3, 6, 12, and 30 days were evaluated using differential scanning calorimeter (DSC) and scanning electron microscopy (SEM). Two phases of hydrolysis were found. The first phase was attributed to faster degradation of amorphous areas of granules, whereas the second phase corresponded to slower degradation of crystalline regions. Peruvian carrot starch was the most susceptible to acid, whereas potato and sweet potato starches were the most resistant. From DSC, it was observed a progressive reduction in peak height and a broadening of peaks with increasing hydrolysis time. The peaks shifted to higher temperatures. Onset temperature decreased on first day of hydrolysis for cassava and Peruvian carrot starches, and on third day for potato and sweet potato. Enthalpy decreased during first stage of hydrolysis in cassava and Peruvian carrot starches, and during second phase, it reduced in all starches. SEM showed that the granule surfaces were degraded by erosion on the first day of treatment, followed by degradation of amorphous areas. On third day, potato and sweet potato starches still displayed some granules almost intact, whereas cassava and Peruvian carrot starch granules were totally degraded, confirming their high susceptibility to acid attack. On sixth day of hydrolysis, starch granules had faceted structures, characteristic of crystalline material. The effect that acid hydrolysis had on thermal properties of starches depended on both hydrolysis stage and starch source.     

Kinetics of autocatalytic acid hydrolysis of cellulose with crystalline and amorphous fractions

The acid hydrolysis of cellulose with crystalline and amorphous fractions is analyzed on the basis of autocatalytic model with a positive feedback of acid production from the degraded biopolymer. In the condition of low acid rate production compared with hydrolysis rate, both fraction of cellulose decrease exponentially with linear and cubic time dependence, and the normalized number of scissions per cellulose chain follows a sigmoid behavior with reaction time. The model predicts that self generated acidic compounds from cellulose accelerate the degradation of the biopolymer. However, if the acidic compounds produced are volatile species, then their release under low pressure will reduce the global rate of degradation of cellulose toward its intrinsic rate value determined by the residual acid catalyst present in the starting material.     

On the role of the conserved aspartate in the hydrolysis of the phosphocysteine intermediate of the low molecular weight tyrosine phosphatase

The usual rate-determining step in the catalytic mechanism of the low molecular weight tyrosine phosphatases involves the hydrolysis of a phosphocysteine intermediate. To explain this hydrolysis, general base-catalyzed attack of water by the anion of a conserved aspartic acid has sometimes been invoked. However, experimental measurements of solvent deuterium kinetic isotope effects for this enzyme do not reveal a rate-limiting proton transfer accompanying dephosphorylation. Moreover, base activation of water is difficult to reconcile with the known gas-phase proton affinities and solution phase pK(a)'s of aspartic acid and water. Alternatively, hydrolysis could proceed by a direct nucleophilic attack by a water molecule. To understand the hydrolysis mechanism, we have used high-level density functional methods of quantum chemistry combined with continuum electrostatics models of the protein and the solvent. Our calculations do not support a catalytic activation of water by the aspartate. Instead, they indicate that the water oxygen directly attacks the phosphorus, with the aspartate residue acting as a H-bond acceptor. In the transition state, the water protons are still bound to the oxygen. Beyond the transition state, the barrier to proton transfer to the base is greatly diminished; the aspartate can abstract a proton only after the transition state, a result consistent with experimental solvent isotope effects for this enzyme and with established precedents for phosphomonoester hydrolysis.