Stepwise construction of novel zig-zag shaped thiophene-based back-to-back terpyridine ligands with acetylenic tethers

A series of structurally well-defined molecular-scale wires bearing one to five 2,5-diethynyl-3,4-dibutylthiophene spacers and 2,2′:6′,2′′-terpyridine capping units were synthesized by a combination of cross-coupling reactions and deprotection steps. Palladium-catalyzed cross-coupling of halogenated thiophene units with acetylene grafted terpyridine effectively yields ethynylated thiophenes. Deprotection of the propargylic fragment provides additional building blocks, which could be used in an iterative sequence of reactions. Reliable and practical synthetic routes are now available for the construction of very large polytopic frameworks.     

A theoretical study of Zn++ interacting with models of ligands present at the thermolysin active site

Summary The binding energy and the geometrical arrangements of the complexes formed by the zinc dication with OH^–, one, four, five or six water molecules, SH^–, H₂S, formic acid, the formate anion, imidazole, its anion and formamide are calculated using the MNDO method. The comparison of the results obtained with those of ab initio computations on the same complexes induced us to propose for Zn⁺⁺ a set of parameters different from the one determined by Dewar for the neutral metal atom. Using the two MNDO parametrizations, similar calculations are carried out for Zn⁺⁺ interacting with two molecules of 2-aminoethanethiol and with models of the four ligands which are present at the thermolysin active site, in order to evaluate the possibilities and limitations of this semiempirical method for theoretical studies concerning zinc metalloenzymes. In the last case, the results obtained suggest that, in the crystal state, the water molecule could be deprotonated. This finding is discussed in relation with the mechanism of action of the enzyme which has been proposed.This laboratory is part of UA 506 of the C.N.R.S.     

Transition metal complexes based on thiophene-dithiolene ligands

The chemistry of transition metal dithiolene complexes based on thiophene-dithiolene ligands (TD) is reviewed, from the ligand synthesis and complex preparation to the molecular structure and solid state physical properties of different compounds based on them. The ligands considered are based mainly either on simple thiophene-dithiolates (α-tpdt = 2,3-thiophenedithiolate, dtpdt = 4,5-dihydro-2,3-thiophenedithiolate, and tpdt = 3,4-thiophenedithiolate), or in more extended and delocalised dithiolate ligands (α-tdt = 3-({5-[(2-cyanoethyl)thio]-2-thieno[2,3-d][1,3]dithiol-2-ylidene-1,3-dithiol-4-yl}thio)propanenitrile and dtdt = 3-{5-[(2-cyanoethyl)thio]-2-(5,6-dihydrothieno[2,3-d][1,3]dithiol-2-ylidene-1,3-dithiol-4-yl)thio}propanenitrile) that besides the thiophenic ring also incorporates a fused TTF moiety. Dithiolene complexes based on ligands containing appended thiophenic units will also be briefly considered. The structural variability of these complexes that in addition to the usual square planar coordination geometry, M(TD)₂, can also present dimeric, [M(TD)₂]₂, or cluster structures such as [Cu₄(TD)₃] and [Ni₄(TD)₆], is addressed. The role of the thiophene group and its ability to enhance electronic delocalisation from the metal dithiolene core throughout the ligand and to establish solid state networks of S?S interactions is discussed. The importance of these complexes as useful building blocks to prepare molecular materials with very interesting magnetic and transport properties, ranging from metamagnets to Single Component Molecular Metals, is illustrated by different compounds based on them.     

Construction of novel coordination polymers with simple ligands

Three different types of metal-organic polymers have been prepared by a solution diffusion process carried out at room temperature. Crystals of the copper coordination polymers [CuX(4,4′-bipy)] _n (X = Cl, Br, I) have been obtained by the reaction of 4,4′-bipyridine ligands with Cu₂X₂ fragments to yield a three-dimensional network consisting of four interlocking planar lattices. Single crystals of [Cu₂(1,2,4,5-BTC)(DMF)₂] _n (1,2,4,5-BTC = 1,2,4,5-benzene tetracarboxylate) have been grown by slow diffusion from solutions of a mixture of CuBr₂, 2,2′-dithiosalicylic acid, and sodium azide plus a mixture of 1,2,4,5-H₄BTC and 4-cyanopyridine. The complex [Co(1,3,5-BTC)(4,4′-bipy)] _n (1,3,5-BTC = 1,3,5-benzene tricarboxylate) has a 3D open framework structure involving terminal cobalt atoms plus bridging 1,3,5-BTC and 4,4′-bipyridine ligands.     

Geometrical design of ligands for spherical ions

New types of ligands for spherical ions have been designed as part of the molecular design strategy for supramolecular compounds. In particular, symmetric conformers of macrocycles, built of −(CH₂)_n−O−(n=3,4,5) fragments, which envelope the spherical ion in a complementary way, have been constructed. Alos, new types of “bracelentands” with different, “hardening” fragments are suggested. Using the molecular mechanics methods, the selectivity of complex formation of the ligands with respect to alkaline metal ions has been investigated. A. V. Bogatskii Physicochemical Institute, Ukrainian Academy of Sciences. Translated fromZhurnal Strukturnoi Khimii, Vol. 36, No. 5, pp. 879–883, September–October, 1995. Translated by L. Smolina     

Extinction coefficient of gold nanoparticles with different sizes and different capping ligands

Extinction coefficients of gold nanoparticles with core size ranging from approximately 4 to 40 nm were determined by high resolution transmission electron microscopy analysis and UV-vis absorption spectroscopic measurement. Three different types of gold nanoparticles were prepared and studied: citrate-stabilized nanoparticles in five different sizes; oleylamide-protected gold nanoparticles with a core diameter of 8 nm, and a decanethiol-protected nanoparticle with a diameter of around 4 nm. A linear relationship between the logarithms of extinction coefficients and core diameters of gold particles was found independent of the capping ligands on the particle surface and the solvents used to dissolve the nanoparticles. This linear relation may be used as a calibration curve to determine the concentration or average size of an unknown nanoparticle or nanoparticle-biomolecule conjugate sample.     

Studies on chromium(III) complexes of some new dithiocarbamato ligands

Summary Tris-chelates of chromium(III) have been synthesised with five new dithiocarbamates, [RR'NCS₂]^–, where R=PhCH₂ and R/t'=H, PhCH₂, Me, Et and i-Pr. Magnetic moments together with electronic, i.r. and e.s.r spectra of the complexes have been described. Various ligand-field parameters have been evaluated and discussed.     

Complexes of molecular oxygen with organic ligands

Conclusion The values of the paramagnetic shifts and their temperature dependence indicate that the interaction of molecular oxygen with various organic molecules is specific and localized in character; that is it takes place in complexes and not in collision contact pairs. Interactions in collision pairs would not have led to the experimentally observed marked differences in the paramagnetic shifts and their temperature dependence for different fragments of the same molecule, since the orientations of the partners in these pairs are random and almost equally probable.The concentration dependence of the paramagnetic shifts in the water-acetone mixture is described by a scheme involving complex formation with competing ligands. It indicates that oxygen does not form complexes with hydrogen bonds, as might have been expected from an analysis of the values of the paramagnetic shifts for different functional groups of the molecules, but forms complexes of the donor-acceptor type, in which oxygen acts as an electron acceptor.The transfer of spin density from the oxygen molecule to the ligands indicates that collectivization of the electron clouds of oxygen and the ligand takes place in the complex, with the formation of common molecular orbitals. This transfer of spin density by itself can be regarded as an indication or criterion of complex formation (particularly in the case of weak short-lived complexes).Institute of Chemical Physics, Academy of Sciences of the USSR. Translated from Zhurnal Strukturnoi Khimii, Vol. 18, No. 5, pp. 817–823, September–October, 1977.     

Formation constants for diarylthallium complexes with neutral ligands

Conclusions The coordinating ability of donor molecules with respect to di(m-tolyl)thallium chloride and di(pentafluorophenyl) thallium nitrate increase in the sequence: CH₃CN < DMFA < DMSO < Py < DMF< EDA. This similar to the Gutman donor number series, but somewhat different from the series for organomercury and organotin compounds. The complexing constants for the organothallium cations are several orders lower than those for the aryl compounds of mercury and tin.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 8, pp. 1762–1765, August, 1976.     

Comparative study of copper(II) interactions with monomeric ligands and synthetic or natural organic materials from potentiometric data

Potentiometric measurements were used to characterize the complexing properties of (a) a mixture of five monomeric ligands, (b) a synthetic humic-like substance and (c) fulvic acids extracted from soils, with copper (II). In order to compare the binding strengths involved, the same mathematical treatments of the data were used for all measurements. Calculations of the total ligand concentration with the Gran function give underestimated values for the multiligand mixture because of the known presence in the mixture of functional groups with pK^H ; 11 which > cannot be titrated and are revealed only by complexation phenomena. The acid-base properties of the humic substances are better described with a continuous model than with the descrete Henderson-Hasselbach model, because of the inability to distinguish properly between equivalent and independent types of functional groups. In the presence of copper (II), the formation functions show that a mixture of different kinds of complexes with different stability constants is probably formed. Extra protons released during the titration of the various copper (II) systems with alkali are attributed to untitrated functional groups with extremely low protonation constants in the case of the multiligand mixture, but ambiguity remains with the humic substances because their chemical structure is not known. Comparison of binding strengths can be made in terms of global conditional stability constants, by taking into account the three parameters, pH, concentrations of metal and of ligand. It is shown that the mechanisms of complexation are different for monomers and for polymers.     

Synthesis of novel multidentate carbohydrate-triazole ligands

Cu(I)-catalyzed 1,3-dipolar cycloaddition (click reaction) of 1 mol equiv of N,N′-di-prop-2-ynyl-phthalamide (1a), N,N′-di-prop-2-ynyl-isophthalamide (1b), and pyridine-2,6-dicarboxylic acid bis-prop-2-ynylamide (1c), respectively with 2 mol equiv of 2,3,4,6-tetra-O-acetyl-β-d-glucopyranosyl azide (2a), 2-azidoethyl 2,3,4,6-tetra-O-acetyl-β-d-glucopyranoside (2b), and 2-azidoethyl 2,3,4,6-tetra-O-acetyl-α-d-mannopyranoside (2c), respectively, afforded the corresponding bis-cycloadducts 3-5, containing two 1,2,3-triazole moieties each, in 38-76% yield. Reaction of 1 mol equiv of 2c with 1 mol equiv of 1c under otherwise identical conditions gave the mono-cycloadduct 6, containing one 1,2,3-triazole and one 2-propynylamide moiety, in 77% yield. Reaction of 6 with 2a afforded 7, containing two different sugar moieties, in 67% yield.     

Direct simultaneous determination of Co, Cu, Fe, Ni and V in pore waters by means of adsorptive cathodic stripping voltammetry with mixed ligands

An analytical procedure is proposed for the direct simultaneous determination in a single scan of Co, Cu, Fe, Ni and V in sediment pore waters by means of adsorptive cathodic stripping voltammetry (ACSV) with mixed ligands (DMG and catechol). Optimum conditions for the determination of these five elements were studied. Detection limits of the technique depended upon the reproducibility of the procedure blank, and were found to be 0.04 nM Co, 0.09 nM Cu, 1.29 nM Fe, 0.46 nM Ni and 2,52 nM V making the method suitable for the direct simultaneous determination of these five metals in pore waters, estuarine waters and probably coastal waters.     

Synthesis of a diverse set of phosphorus ligands on solid support and their screening in the Heck reaction

Representative members from five different families of supported phosphine and phosphinite ligands have been prepared from common templates—polymer-bound aminoalcohols. These include β-aminophosphines, N,β-diphosphinoamines, α,β-diphosphinoamines, β-aminophosphinites and N-phosphino-β-aminophosphinites. Representatives of each family of ligands were complexed with Pd(OAc)₂ and screened in the Heck reaction of iodo- and bromobenzene. While the reaction of iodoarenes is ligand-independent, the reaction of bromoarenes is ligand-sensitive. The rationale for this behavior is suggested. Lead ligands for the reaction of bromoarenes were determined.     

Novel chiral bisoxazoline ligands with a bipyridinyl backbone: preparation and interesting complexation behavior

Novel C₂-symmetric chiral bisoxazoline ligands with a bipyridinyl backbone were prepared with ease from 3,3′-dicarbomethoxy-2,2′-bipyridine and enantiomerically pure 2-amino alcohols via a corresponding amide as intermediate. Interestingly, when these ligands were coordinated with Pd(II) and Cu(I), different complexation behaviors were found.     

Suzuki cross-coupling of hexachlorobenzene promoted by the Buchwald ligands

The study of cross-coupling between hexachlorobenzene and phenylboronic acid comprised five Buchwald ligands, from which 2-dicyclohexylphosphino-2′-(dimethylamino)biphenyl (DavePHOS) provided the best conversion. When excess of phenylboronic acid was used, a mixture of isomeric tri-, tetra- and pentaphenyl-substituted derivatives in the ～10:70:20 ratio was obtained, along with minor amounts of hydrodechlorination products.

     

Effect of selected ligands on the U(VI) immobilization by zerovalent iron

Summary Theeffect ofCl^-, CO₃^2-, EDTA, NO₂^-, NO₃^-, PO₄^3-, SO₄^2-, and humic substances (HS)on the U(VI)co-precipitation from aqueous solutions by zerovalent iron (ZVI) was investigated in the neutral pH range.Batch experiments without shaking were conducted for 14 days mostly with five different ZVI materials (15 g/l), selected ligands (10mM) and an U(VI) solution (20 mg/l, 0.084mM). Apart from Cl^-, all tested ligands induced a decrease ofU(VI)coprecipitation. This decrease is attributed to the surface adsorption and complexation of the ligands at the reactive sites on the surface of ZVI and their corrosion products. The decrease ofU(VI)removal was not uniform with the five ZVI materials. Generally, groundwater with elevated EDTA concentration could not be remediated with the ZVI barrier technology. The response of the system on the pre-treating by two ZVI materials in 250mM HCl indicated that in situ generated corrosion products favor an irreversible U(VI) uptake. Thus for the long term performance of ZVI barrier, the iron dissolution should continue in such a way that fresh iron oxide be always available for U(VI) coprecipitation.     

Heterocyclic amines for the construction of peptoid oligomers bearing multi-dentate ligands

Peptoids are oligomers of N-substituted glycine that can be readily assembled using haloacetic acids and primary amines as synthons. Here, we report the synthesis and characterization of three new heterocyclic amines, 2-(2,2′:6′,2″-terpyridine-4′-yloxy)ethylamine, 2-(1,10-phenanthroline-5-yloxy)ethylamine and 8-hydroxy-2-quinolinemethylamine, and their incorporation into a series of different peptoid oligomer sequences. Since the heterocycles are all known to coordinate metal ions, the peptidomimetic products are designed to bind metal species with the potential for applications in catalysis and materials science.     

Thermal behaviour of some new complexes with bismacrocyclic ligands as potential biological active species

Novel complexes of type [M₂LCl₄]·nH₂O ((1) M:Ni, n = 5; (2) M:Cu, n = 0 and (3) M:Zn, n = 2; L: ligand resulted from 1,2-phenylenediamine, 3,6-diazaoctane-1,8-diamine and formaldehyde template condensation) were synthesised and characterised. The features of complexes have been assigned from microanalytical, IR and UV–Vis data. The thermal analyses have evidenced the thermal intervals of stability and also the thermodynamic effects that accompany them. Processes as water or hydrochloric acid elimination as well as oxidative degradation of the organic ligand were observed. Complexes display a different thermal behaviour as result of dissimilar chemical interaction of metal ions with chloride anions. The final product of decomposition was metal(II) oxide as powder X-ray diffraction indicated.     

Metal coordination architectures of triazole-based ligands: Effect of the backbone of bridging ligands on the construction of polymers

In our efforts to investigate the influence of the backbone of different triazole-based bridging ligands on the structure of their metal complexes, four new coordination polymers, {[Cu(L¹)₂(H₂O)₂]Cl₂}_n (1), [Cu(L²)₂Cl₂]_n (2), [Co(L²)₂(SCN)₂]_n (3), and [Cu(L³)₂(NO₃)₂]_n (4), (L¹ = 1,2-bis(triazol-1-ylmethyl)benzene, L² = 1,3-bis(triazol-1-ylmethyl)benzene, L³ = 1,4-bis(triazol-1-ylmethyl)benzene), have been synthesized. All the complexes have been structurally characterized by IR, elemental analysis and single-crystal X-ray diffraction. Structural analyses show that 1 and 4 possess 2D coordination networks with (4,4) topology, and 1 shows a diagonal–diagonal inclined interpenetration. 2 and 3 are isostructural and feature 1D double chain, which further connected by C–H···Cl or π···π weak interactions to form 2D supramolecular frameworks. The results show that the structures of ligands (with different non-coordination backbone spacers) play important roles in the formation of such coordination architectures. Furthermore, EPR (Electron Paramagnetic Resonance) spectra of Cu^II complexes (1, 2, and 4) have been investigated in the solid state at room temperature.     

Interaction of chelates with macrocyclic ligands. Porphyrins and Hg(II) chelate salts

The complex formation of different porphyrins (5,10,15,20-tetraphenylporphine (I), N-methyl-5,10,15,20-tetraphenylporphine (II), 2,3,7,8,12,13,17,18-octaphenyltetraazaporphyrin (III), and tert-butylphthalocyanine (IV)) with mercury(II) valinate (Hg(Val)₂) in DMSO was studied. The rates of reactions of macrocycles I, II, and IV with mercury(II) valinate were found to be higher than those with valinates of other d metals, and the complex formation rates of III with Hg(Val)₂ were comparable with these characteristics for other valinates. Mechanisms for binding of different porphyrins by Hg(II) chelate salts were proposed.Translated from Koordinatsionnaya Khimiya, Vol. 31, No. 2, 2005, pp. 93–97. Original Russian Text Copyright © 2005 by Mamardashvili, Berezin.