苯-卤素(X2, X=F, Cl, Br, I)相互作用本质的对称性匹配微扰理论研究

在MP2水平下对被定义为"电荷转移复合物(CTC)"的苯(C6H6)-卤素分子X2(X＝F, Cl, Br, I)相互作用体系进行了量子化学研究. 在优化所得C6H6-X2(X＝F, Cl, Br, I)复合物的平衡几何结构中, 卤素分子X2接近垂直指向苯环上碳-碳双键的中心. 自然键轨道(NBO)分析结果表明, 苯-卤素体系中电荷转移的数量很少. 对称性匹配微扰理论(Symmetry-adapted perturbation theory, SAPT) 能量分解结果显示, 在4个复合物体系中, 静电作用的贡献相对较小(只占总吸引作用的20%左右), 对于C6H6-F2体系, 色散作用是其主要吸引作用, 对于C6H6-Cl2, C6H6-Br2和C6H6-I2 体系, 诱导作用则是其主要的吸引作用, 从F到I, 色散作用逐渐减弱, 诱导作用逐渐增强, 表明在电子相关水平上将苯-卤素体系称为"电荷转移复合物"的说法并不确切.     

Solid state structure and solution behaviour of organoselenium(II) compounds containing 2-{E(CH2CH2)2NCH2}C6H4 groups (E = O, NMe)

Cleavage of the Se-Se bond in [2-{O(CH(2)CH(2))(2)NCH(2)}C(6)H(4)](2)Se(2) (1) and [2-{MeN(CH(2)CH(2))(2)NCH(2)}C(6)H(4)](2)Se(2) (2) by treatment with SO(2)Cl(2), bromine or iodine (1 : 1 molar ratio) yielded [2-{O(CH(2)CH(2))(2)NCH(2)}C(6)H(4)]SeX [X = Cl (3), Br (4), I (5)] and [2-{MeN(CH(2)CH(2))(2)NCH(2)}C(6)H(4)]SeI (6). The compounds were characterized in solution by NMR spectroscopy (1H, 13C, 15N, 77Se, 2D experiments). The solid-state molecular structures of 1-3, 4.HBr, 5 and 6 were established by single crystal X-ray diffraction. In all cases T-shaped coordination geometries, i.e. (C,N)SeSe (1, 2), (C,N)SeX (3, 5, 6; X = halogen) or CSeBr(2) (4.HBr), were found. Supramolecular associations in crystals based on hydrogen contacts are discussed.     

单电子卤键复合体系H3C···Br-Y(Y=H, CN, NC, CCH, C2H3)的作用机制

对单电子溴键复合物H₃C···Br—Y(Y=H, CCH, CN, NC, C2H3)的结构与性质进行了理论研究. 在B3LYP/6-311++G**水平上计算了稳定构型并做了频率分析. BSSE矫正的相互作用能(E^BSSE)和NBO及AIM分析输入的波函数在MP2/6-311++G**水平下完成. 复合物H₃C···Br—Y中, CH₃(供电子体)自由基均提供一未成对电子与Br—Y中Br(受电子体)形成了单电子溴键, 此单电子溴键也具有“三电子”键的特征. 单电子溴键的形成导致甲基H的背向Y弯曲和Br—Y键的拉长及红移单电子溴键复合物的产生. 考察了电子受体中不同取代基, C(spⁿ)-Br杂化及溶剂的存在对复合物作用的影响, 将单电子氢键, 单电子卤键和单电子锂键的作用强度做了对比, 进一步对Popelier提出的氢键体系中的前三个重要拓扑指标在单电子溴键体系中的重现性进行了探讨.     

Supramolecular chemistry of halogens: complementary features of inorganic (M-X) and organic (C-X') halogens applied to M-X...X'-C halogen bond formation

Electronic differences between inorganic (M-X) and organic (C-X) halogens in conjunction with the anisotropic charge distribution associated with terminal halogens have been exploited in supramolecular synthesis based upon intermolecular M-X...X'-C halogen bonds. The synthesis and crystal structures of a family of compounds trans-[MCl(2)(NC(5)H(4)X-3)(2)] (M = Pd(II), Pt(II); X = F, Cl, Br, I; NC(5)H(4)X-3 = 3-halopyridine) are reported. With the exception of the fluoropyridine compounds, network structures propagated by M-Cl...X-C halogen bonds are adopted and involve all M-Cl and all C-X groups. M-Cl...X-C interactions show Cl...X separations shorter than van der Waals values, shorter distances being observed for heavier halogens (X). Geometries with near linear Cl...X-C angles (155-172 degrees ) and markedly bent M-Cl...X angles (92-137 degrees ) are consistently observed. DFT calculations on the model dimers {trans-[MCl(2)(NH(3))(NC(5)H(4)X-3)]}(2) show association through M-Cl...X-C (X not equal F) interactions with geometries similar to experimental values. DFT calculations of the electrostatic potential distributions for the compounds trans-[PdCl(2)(NC(5)H(4)X-3)(2)] (X = F, Cl, Br, I) demonstrate the effectiveness of the strategy to activate C-X groups toward halogen bond formation by enhancing their electrophilicity, and explain the absence of M-Cl...F-C interactions. The M-Cl...X-C halogen bonds described here can be viewed unambiguously as nucleophile-electrophile interactions that involve an attractive electrostatic contribution. This contrasts with some types of halogen-halogen interactions previously described and suggests that M-Cl...X-C halogen bonds could provide a valuable new synthon for supramolecular chemists.     

Experimental and theoretical studies on the nature of weak nonbonded interactions between divalent selenium and halogen atoms

To investigate the nature of weak nonbonded selenium...halogen interactions (Se...X interactions; X = F, Cl, and Br), three types of model compounds [2-(CH(2)X)C(6)H(4)SeY (1-3), 3-(CH(2)X)-2-C(10)H(6)SeY (4-6), and 2-XC(6)H(4)CH(2)SeY (7-9); Y = CN, Cl, Br, SeAr, and Me] were synthesized, and their (77)Se NMR spectroscopic behaviors were analyzed in CDCl(3). The gradual upfield shifts of (77)Se NMR absorptions observed for series 1-3 and 4-6 suggested that the strength of Se...X interaction decreases in the order of Se...F > Se...Cl > Se...Br. The quantum chemical calculations at the B3LYP/631H level using the polarizable continuum model (PCM) revealed that the most stable conformer for 1-3 is the one with an intramolecular short Se...X atomic contact in CHCl(3) (epsilon = 4.9) and also that the n(X) --> sigma(Se-Y) orbital interaction (E(Se...X)) can reasonably explain the order of strength for the Se...X interactions. On the other hand, the (77)Se NMR absorptions observed for series 7-9 did not shift significantly from the reference compounds (C(6)H(5)CH(2)SeY), indicating the absence of the Se...X interaction for 7-9 presumably due to attenuation of basicity for the halogen atom that is substituted directly to the aromatic ring. These observations suggested that the n(X) --> sigma(Se-Y) orbital interaction is a dominant factor for formation of weak Se...X interactions. Electron correlation was also suggested to be important for the stability.     

Rational Modification of the Hierarchy of Intermolecular Interactions in Molecular Crystal Structures by Using Tunable Halogen Bonds

A family of 16 isomolecular salts (3‐XpyH)₂[MX′₄] (3‐XpyH=3‐halopyridinium; M=Co, Zn; X=(F), Cl, Br, (I); X′=Cl, Br, I) each containing rigid organic cations and tetrahedral halometallate anions has been prepared and characterized by X‐ray single crystal and/or powder diffraction. Their crystal structures reflect the competition and cooperation between non‐covalent interactions: N? H???X′? M hydrogen bonds, C? X???X′? M halogen bonds and π–π stacking. The latter are essentially unchanged in strength across the series, but both halogen bonds and hydrogen bonds are modified in strength upon changing the halogens involved. Changing the organic halogen (X) from F to I strengthens the C? X???X′? M halogen bonds, whereas an analogous change of the inorganic halogen (X′) weakens both halogen bonds and N? H???X′? M hydrogen bonds. By so tuning the strength of the putative halogen bonds from repulsive to weak to moderately strong attractive interactions, the hierarchy of the interactions has been modified rationally leading to systematic changes in crystal packing. Three classes of crystal structure are obtained. In type A (C? F???X′? M) halogen bonds are absent. The structure is directed by N? H???X′? M hydrogen bonds and π‐stacking interactions. In type B structures, involving small organic halogens (X) and large inorganic halogens (X′), long (weak) C? X???X′? M interactions are observed with type I halogen–halogen interaction geometries (C? X???X′ ≈ X???X′? M ≈155°), but hydrogen bonds still dominate. Thus, minor but quite significant perturbations from the type A structure arise. In type C, involving larger organic halogens (X) and smaller inorganic halogens (X′), stronger halogen bonds are formed with a type II halogen–halogen interaction geometry (C? X???X′ ≈180°; X???X′? M ≈110°) that is electrostatically attractive. The halogen bonds play a major role alongside hydrogen bonds in directing the type C structures, which as a result are quite different from type A and B.     

Halogen bonding interaction between fluorohalides and isocyanides

The optimized geometries and corresponding binding energies of complexes between fluorohalides, FX (X = Cl, Br, and I), and isocyanides, CNY (Y = CN, NC, NO(2), F, CF(3), Cl, Br, H, CCF, CCH, CH(3), SiH(3), Li, and Na), were calculated at the MP2(Full)/aug-cc-pVTZ (aug-cc-pVTZ-PP on I) level of theory, without and with basis set superposition error (BSSE) corrections through the counterpoise (CP) method. The optimized complex geometries were analyzed through the Steiner-Limbach relationship, which can be used to establish correlations between the F-X and X-C bond lengths. For all complexes, the correlations were shown to improve considerably when using optimized geometries including BSSE corrections. It was shown that further improvements can be achieved through the introduction of an extended four-parameter form of the Steiner-Limbach relationship which accounts for all differences between the valences associated with the two bonds involving the halogen in an A-X···B complex. The results indicate that chlorine as a halogen bond donor is affected by the basicity of the isocyanides and forms different types of halogen bonds as the F-Cl bond lengthens in parallel with the shortening of the distance between Cl and the isocyanide carbon. This is not observed for iodine and bromine as halogen-bond donors, which is illustrated by the low levels of correlation obtained when applying the standard and extended Steiner-Limbach relationships to the corresponding complexes.     

Synthesis, spectroscopic and structural characterization of tertiary phosphine tellurium dihalides Et3PTeX2(X = Cl, Br, I)

The reactions of triethylphosphine telluride with SO2Cl2 or I2 produced the first structurally characterized tellurium-containing tertiary phosphine chalcogen dihalides, Et3PTeCl2 and Et3PTeI2, respectively, in good yields. The corresponding dibromide, Et3PTeBr2, was obtained by an in situ reaction between Et3PTeCl2 and two equivalents of Me3SiBr. This series of compounds has been characterized in the solid state by X-ray structural analyses and in solution by multinuclear NMR spectra. The structures of Et3PTeX2(X = Cl, Br, I) all show a T-shaped geometry around tellurium with weak Te...halogen interactions giving rise to centrosymmetric dimers. NMR data indicate that Et3PTeI2 exhibits the weakest P-Te bond in solution. The ionic complexes, [(Et3PO)2H]2[Te2I6] and [(Et3PO)2H]2[TeI4], were isolated from THF solutions of Et3PTeI2 and characterized by X-ray structural determinations.     

Magnitude and origin of the attraction and directionality of the halogen bonds of the complexes of C6F5X and C6H5X (X = I, Br, Cl and F) with pyridine

The geometries and interaction energies of complexes of pyridine with C₆F₅X, C₆H₅X (X=I, Br, Cl, F and H) and R_FI (R_F=CF₃, C₂F₅ and C₃F₇) have been studied by ab initio molecular orbital calculations. The CCSD(T) interaction energies (E_int) for the C₆F₅X–pyridine (X=I, Br, Cl, F and H) complexes at the basis set limit were estimated to be ?5.59, ?4.06, ?2.78, ?0.19 and ?4.37 kcal mol^?1, respectively, whereas the E_int values for the C₆H₅X–pyridine (X=I, Br, Cl and H) complexes were estimated to be ?3.27, ?2.17, ?1.23 and ?1.78 kcal mol^?1, respectively. Electrostatic interactions are the cause of the halogen dependence of the interaction energies and the enhancement of the attraction by the fluorine atoms in C₆F₅X. The values of E_int estimated for the R_FI–pyridine (R_F=CF₃, C₂F₅ and C₃F₇) complexes (?5.14, ?5.38 and ?5.44 kcal mol^?1, respectively) are close to that for the C₆F₅I–pyridine complex. Electrostatic interactions are the major source of the attraction in the strong halogen bond although induction and dispersion interactions also contribute to the attraction. Short‐range (charge‐transfer) interactions do not contribute significantly to the attraction. The magnitude of the directionality of the halogen bond correlates with the magnitude of the attraction. Electrostatic interactions are mainly responsible for the directionality of the halogen bond. The directionality of halogen bonds involving iodine and bromine is high, whereas that of chlorine is low and that of fluorine is negligible. The directionality of the halogen bonds in the C₆F₅I– and C₂F₅I–pyridine complexes is higher than that in the hydrogen bonds in the water dimer and water–formaldehyde complex. The calculations suggest that the C? I and C? Br halogen bonds play an important role in controlling the structures of molecular assemblies, that the C? Cl bonds play a less important role and that C? F bonds have a negligible impact.     

Comparative Study of Halogen‐ and Hydrogen‐Bond Interactions between Benzene Derivatives and Dimethyl Sulfoxide

The halogen bond, similar to the hydrogen bond, is an important noncovalent interaction and plays important roles in diverse chemistry‐related fields. Herein, bromine‐ and iodine‐based halogen‐bonding interactions between two benzene derivatives (C₆F₅Br and C₆F₅I) and dimethyl sulfoxide (DMSO) are investigated by using IR and NMR spectroscopy and ab initio calculations. The results are compared with those of interactions between C₆F₅Cl/C₆F₅H and DMSO. First, the interaction energy of the hydrogen bond is stronger than those of bromine‐ and chlorine‐based halogen bonds, but weaker than iodine‐based halogen bond. Second, attractive energies depend on 1/rⁿ, in which n is between three and four for both hydrogen and halogen bonds, whereas all repulsive energies are found to depend on 1/r^8.5. Third, the directionality of halogen bonds is greater than that of the hydrogen bond. The bromine‐ and iodine‐based halogen bonds are strict in this regard and the chlorine‐based halogen bond only slightly deviates from 180°. The directional order is iodine‐based halogen bond>bromine‐based halogen bond>chlorine‐based halogen bond>hydrogen bond. Fourth, upon the formation of hydrogen and halogen bonds, charge transfers from DMSO to the hydrogen‐ and halogen‐bond donors. The CH₃ group contributes positively to stabilization of the complexes.     

Halogen bonding in mono- and dihydrated halobenzene

Density functional theory calculations were performed on halogen-bonded and hydrogen-bonded systems consisting of a halobenzene (XPh; X = F, Cl, Br, I, and At) and one or two water molecules, using the M06-2X density functional with the 6-31+G(d) (for C, H, F, Cl, and Br) and aug-cc-pVDZ-PP (for I, At) basis sets. The counterpoise procedure was performed to counteract the effect of basis set superposition error. The results show halogen bonds form in the XPh-H₂O system when X > Cl. There is a trend toward stronger halogen bonding as the halogen group is descended, as assessed by interaction energy and X•••O_w internuclear separation (where O_w is the water oxygen). For all XPh-H₂O systems hydrogen-bonded systems exist, containing a combination of CH•••O_w and O_wH_w•••X hydrogen bonds. For all systems except X = At the X•••H_w hydrogen-bonding interaction is stronger than the X•••O_w halogen bond. In the XPh-(H₂O)₂ system halogen bonds form only for X > Br. The two water molecules prefer to form a water dimer, either located around the C H bond (for X = Br, At, and I) or located above the benzene ring (for all halogens). Thus, even in the absence of competing strong interactions, halogen bonds may not form for the lighter halogens due to (1) competition from cooperative weak interactions such as C H•••O and OH•••X hydrogen bonds, or (2) if the formation of the halogen bond would preclude the formation of a water dimer. © 2018 Wiley Periodicals, Inc.     

Nature of MoH···I bonds in Cp2Mo(L)H···I‐C≡C‐R Complexes (L=H,CN, PPh2, C(CH3)3; R=NO2, Cl,Br, H,OH, CH3, NH2)

The nature of the MoH···I bond in Cp₂Mo(L)H···I‐C≡C‐R (L= H, CN, PPh₂, C(CH₃)₃; R=NO₂, Cl, Br, H, OH, CH₃, NH₂) was investigated using electrostatic potential analysis, topological analysis of the electron density, energy decomposition analysis and natural bond orbital analysis. The calculated results show that MoH···I interactions in the title complexes belong to halogen‐hydride bond, which is similar to halogen bonds, not hydrogen bonds. Different to the classical halogen bonds, the directionality of MoH···I bond is low; Although electrostatic interaction is dorminant, the orbital interactions also play important roles in this kind of halogen bond, and steric interactions are weak; the strength of H···I bond can tuned by the most positive electrostatic potential of the I atom. As the electron‐withdrawing ability of the R substituent in the alkyne increases, the electrostatic potential maximum of the I atom increases, which enhances the strength of the H···I halogen bond, as well as the electron transfer.     

H-coupled electron transfer in alkane C-h activations with halogen electrophiles

The mechanisms for the reactions of isobutane and adamantane with polyhalogen electrophiles (HHal(2)(+), Hal(3)(+), Hal(5)(+), and Hal(7)(+), Hal = Cl, Br, or I) were studied computationally at the MP2 and B3LYP levels of theory with the 6-31G (C, H, Cl, Br) and 3-21G (I) basis sets, as well as experimentally for adamantane halogenations in Br(2), Br(2)/HBr, and I(+)Cl(-)/CCl(4). The transition structures for the activation step display almost linear C...H...Hal interactions and are characterized by significant charge transfer to the electrophile; the hydrocarbon moieties resemble the respective radical cation structures. The regiospecificities for polar halogenations of the 3-degree C-H bonds of adamantane, the high experimental kinetic isotope effects (k(H)/k(D) = 3-4), the rate accelerations in the presence of Lewis and proton (HBr) acids, and the high kinetic orders for halogen (7.5 for Br(2)) can only be understood in terms of an H-coupled electron-transfer mechanism. The three centered-two electron (3c-2e) electrophilic mechanistic concept based on the attack of the electrophile on a C-H bond does not apply; electrophilic 3c-2e interactions dominate the C-H activations only with nonoxidizing electrophiles such as carbocations. This was shown by a comparative computational analysis of the electrophilic and H-coupled electron-transfer activation mechanisms for the isobutane reaction with an ambident electrophile, the allyl cation, at the above levels of theory.     

Synthesis of carbaalane halogen derivatives

The carbaalane halogen derivatives [(AlX)(6)(AlNMe(3))(2)(CCH(2)CH(2)SiMe(3))(6)] (X = F (9), Cl (7), Br (10), I (11)) were prepared in toluene from [(AlH)(6)(AlNMe(3))(2)(CCH(2)CH(2)SiMe(3))(6)] (6) and BF(3).OEt(2), BX(3) (X = Br, I), Me(3)SnF, and Me(3)SiX (X = Cl, Br, I), respectively. A partially halogenated product [(AlH)(2)(AlX)(4)(AlNMe(3))(2)(CCH(2)CH(2)SiMe(3))(6)] (12) (X = Cl (approximately 40%), Br (approximately 60%)) was obtained from 5 and impure BBr(3). [(AlH)(6)(AlNMe(3))(2)(CCH(2)Ph)(6)] (5) was converted to [(AlX)(6)(AlNMe(3))(2)(CCH(2)Ph)(6)] (X = F (13), Cl (14), Br (15), I (16)) using BF(3).OEt(2) and Me(3)SiX (X = Cl, Br, I), respectively. The X-ray single-crystal structures of 11.C(6)H(6), 12.3C(7)H(8), 13.6C(7)H(8), and 15.4C(7)H(8) were determined. Compounds 7 and 9-11 are soluble in benzene/toluene and could be well characterized by NMR spectroscopy and MS (EI) spectrometry. The results demonstrate the facile substitution of the hydridic hydrogen atoms in 5 and 6 by the halides with different reagents.     

Weakly coordinating anions: crystallographic and NQR studies of halogen-metal bonding in silver, thallium, sodium, and potassium halomethanesulfonates

35Cl, (79,81)Br, and (127)I NQR (nuclear quadrupole resonance) spectroscopy in conjunction with X-ray crystallography is potentially one of the best ways of characterizing secondary bonding of metal cations such as Ag(+) to halogen donor atoms on the surfaces of very weakly coordinating anions. We have determined the X-ray crystal structure of Ag(O(3)SCH(2)Cl) (a = 13.241(3) A; b = 7.544(2) A; c = 4.925(2) A; orthorhombic; space group Pnma; Z = 4) and compared it with the known structure of Ag(O(3)SCH(2)Br) (Charbonnier, F.; Faure, R.; Loiseleur, H. Acta Crystallogr., Sect. B 1978, 34, 3598-3601). The halogen atom in each is apical (three-coordinate), being weakly coordinated to two silver ions. (127)I NQR studies on Ag(O(3)SCH(2)I) show the expected NQR consequences of three-coordination of iodine: substantially reduced NQR frequencies nu(1) and nu(2) and a fairly small NQR asymmetry parameter eta. The reduction of the halogen NQR frequency of the coordinating halogen atom in Ag(O(3)SCH(2)X) becomes more substantial in the series X = Cl < Br < I, indicating that the coordination to Ag(+) strengthens in this series, as expected from hard-soft acid-base principles. The numbers of electrons donated by the organic iodine atom to Ag(+) have been estimated; these indicate that the bonding to the cation is weak but not insignificant. We have not found any evidence for the bonding of these organohalogen atoms to another soft-acid metal ion, thallium. A scheme for recycling of thallium halide wastes is included.     

Isostructurality, polymorphism and mechanical properties of some hexahalogenated benzenes: the nature of halogen...halogen interactions

The nature of intermolecular interactions between halogen atoms, X...X (X = Cl, Br, I), continues to be of topical interest because these interactions may be used as design elements in crystal engineering. Hexahalogenated benzenes (C6Cl(6-n)Br(n), C6Cl(6-n)I(n), C6Br(6-n)I(n)) crystallise in two main packing modes, which take the monoclinic space group P2(1)/n and the triclinic space group P1. The former, which is isostructural to C6Cl6, is more common. For molecules that lack inversion symmetry, adoption of this monoclinic structure would necessarily lead to crystallographic disorder. In C6Cl6, the planar molecules form Cl...Cl contacts and also pi...pi stacking interactions. When crystals of C6Cl6 are compressed mechanically along their needle length, that is, [010], a bending deformation takes place, because of the stronger interactions in the stacking direction. Further compression propagates consecutively in a snakelike motion through the crystal, similar to what has been suggested for the motion of dislocations. The bending of C6Cl6 crystals is related to the weakness of the Cl...Cl interactions compared with the stronger pi...pi stacking interactions. The triclinic packing is less common and is restricted to molecules that have a symmetrical (1,3,5- and 2,4,6-) halogen substitution pattern. This packing type is characterised by specific, polarisation-induced X...X interactions that result in threefold-symmetrical X3 synthons, especially when X = I; this leads to a layered pseudohexagonal structure in which successive planar layers are inversion related and stacked so that bumps in one layer fit into the hollows of the next in a space-filling manner. The triclinic crystals shear on application of a mechanical stress only along the plane of deformation. This shearing arises from the sliding of layers against one another. Nonspecificity of the weak interlayer interactions here is demonstrated by the structure of twinned crystals of these compounds. One of the compounds studied (1,3,5-tribromo-2,4,6-triiodobenzene) is dimorphic, adopting both the monoclinic and triclinic structures, and the reasons for polymorphism are suggested. To summarise, both chemical and geometrical models need to be considered for X...X interactions in hexahalogenated benzenes. The X...X interactions in the monoclinic group are nonspecific, whereas in the triclinic group some X...X interactions are anisotropic, chemically specific and crystal-structure directing.     

Electron stimulated desorption of anions from native and brominated single stranded oligonucleotide trimers

We measured the low energy electron stimulated desorption (ESD) of anions from thin films of native (TXT) and bromine monosubstituted (TBrXT) oligonucleotide trimers deposited on a gold surface (T = thymidine, X = T, deoxycytidine (C), deoxyadenosine (A) or deoxyguanosine (G), Br = bromine). The desorption of H(-), CH(3)(-)/NH(-), O(-)/NH(2)(-), OH(-), CN(-), and Br(-) was induced by 0 to 20 eV electrons. Dissociative electron attachment, below 12 eV, and dipolar dissociation, above 12 eV, are responsible for the formation of these anions. The comparison of the results obtained for the native and brominated trimers suggests that the main pathways of TBrXT degradation correspond to the release of the hydride and bromide anions. Significantly, the presence of bromine in oligonucleotide trimers blocks the electron-induced degradation of nuclobases as evidenced by a dramatic decrease in CN(-) desorption. An increase in the yields of OH(-) is also observed. The debromination yield of particular oligonucleotides diminishes in the following order: BrdU?>?BrdA?>?BrdG?>?BrdC. Based on these results, 5-bromo-2(')-deoxyuridine appears to be the best radiosensitizer among the studied bromonucleosides.     

Synthesis of the pivalamidate-bridged pentanuclear platinum(II,III) linear complexes with Pt...Pt interactions

Pentanuclear linear chain Pt(II,III) complexes [[Pt2(NH3)2X2((CH3)3CCONH)2(CH2COCH3)]2[PtX'4]].nCH3COCH3 (X = X' = Cl, n = 2 (1a), X = Cl, X' = Br, n = 1 (1b), X = Br, X' = Cl, n = 2 (1c), X = X' = Br, n = 1 (1d)) composed of a monomeric Pt(II) complex sandwiched by two amidate-bridged Pt dimers were synthesized from the reaction of the acetonyl dinuclear Pt(III) complexes having equatorial halide ligands [Pt2(NH3)2X2((CH3)3CCONH)2(CH2COCH3)]X' ' (X = Cl (2a), Br (2b), X' ' = NO3-, CH3C6H4SO3-, BF4-, PF6-, ClO4-), with K2[PtX'4] (X' = Cl, Br). The X-ray structures of 1a-1d show that the complexes have metal-metal bonded linear Pt5 structures, and the oxidation state of the metals is approximately Pt(III)-Pt(III)...Pt(II)...Pt(III)-Pt(III). The Pt...Pt interactions between the dimer units and the monomer are due to the induced Pt(II)-Pt(IV) polarization of the Pt(III) dimeric unit caused by the electron withdrawal of the equatorial halide ligands. The density functional theory calculation clearly shows that the Pt...Pt interactions between the dimers and the monomer are made by the electron transfer from the monomer to the dimers. The pentanuclear complexes have flexible Pt backbones with the Pt chain adopting either arch or sigmoid structures depending on the crystal packing.     

The synthesis and crystal structures of halogenated tolans p-X-C6H4-C[triple bond]C-C6F5 and p-X-C6F4-C[triple bond]C-C6H5(X=F, Cl, Br, I)

A series of halogenated, partially fluorinated tolans of general formula p-X-C6H4-C[triple bond]C-C6F5[X=I (1), Br (2), Cl (3), F (4)] and p-X-C6F4-C[triple bond]C-C6H5[X=I (5), Br (6)] have been prepared via palladium-catalysed Sonogashira cross-coupling, or for X=Cl (7), by nucleophilic aromatic substitution reactions. The single-crystal X-ray structures of 1-3 and 5-6 have been determined. The structures reveal that the molecular packing is characterized by either arene-perfluoroarene interactions (3), or halogen-halogen interactions (isomorphous 1 and 2), or neither (isomorphous 5 and 6). The structure of represents the first fully determined crystal structure of a compound that contains a halogen atom other than fluorine, in which arene-perfluoroarene interactions are present.     

Halogen-hydride interaction between Z-X (Z = CN, NC; X = F, Cl, Br) and H-Mg-Y (Y = H, F, Cl, Br, CH3)

Halogen-hydride interactions between Z-X (Z = CN, NC and X = F, Cl, Br) as halogen donor and H-Mg-Y (Y = H, F, Cl, Br, CH(3)) as electron donor have been investigated through the use of Becke three-parameter hybrid exchange with Lee-Yang-Parr correlation (B3LYP), second-order M?ller-Plesset perturbation theory (MP2), and coupled-cluster single and double excitation (with triple excitations) [CCSD(T)] approaches. Geometry changes during the halogen-hydride interaction are accompanied by a mutual polarization of both partners with some charge transfer occurring from the electron donor subunit. Interaction energies computed at MP2 level vary from -1.23 to -2.99 kJ/mol for Z-F···H-Mg-Y complexes, indicating that the fluorine interactions are relatively very weak but not negligible. Instead, for chlorine- and bromine-containing complexes the interaction energies span from -5.78 to a maximum of -26.42 kJ/mol, which intimate that the interactions are comparable to conventional hydrogen bonding. Moreover, the calculated interaction energy was found to increase in magnitude with increasing positive electrostatic potential on the extension of Z-X bond. Analysis of geometric, vibrational frequency shift and the interaction energies indicates that, depending on the halogen, CN-X···H interactions are about 1.3-2.0 times stronger than NC-X···H interactions in which the halogen bonds to carbon. We also identified a clear dependence of the halogen-hydride bond strength on the electron-donating or -withdrawing effect of the substituent in the H-Mg-Y subunits. Furthermore, the electronic and structural properties of the resulting complexes have been unveiled by means of the atoms in molecules (AIM) and natural bond orbital (NBO) analyses. Finally, several correlative relationships between interaction energies and various properties such as binding distance, frequency shift, molecular electrostatic potential, and intermolecular density at bond critical point have been checked for all studied systems.