Ionisation Energies and the Electronic Structures of the N-oxides of diazabenzenes

The ionisation energies and the HeI photoelectron spectra of the N-oxides of diazabenzenes are presented. The valence electronic structures of the N-oxides are discussed in view of the ionisation energies, and the profiles, of the bands. The interpreted data are compared to calculations which are in good agreement. The results are correlated to the physicochemical studies, and particularly to the electronic absorption spectroscopy, of the N-oxides. The assignment of the photoelectron spectra of the azabenzenes are considered with reference to the spectra of their N-oxides.     

Structures, energetics, and spectra of hydrated hydroxide anion clusters

The structures, energetics, electronic properties, and spectra of hydrated hydroxide anions are studied using density functional and high level ab initio calculations. The overall structures and binding energies are similar to the hydrated anion clusters, in particular, to the hydrated fluoride anion clusters except for the tetrahydrated clusters and hexahydrated clusters. In tetrahydrated system, tricoordinated structures and tetracoordinated structures are compatible, while in pentahydrated systems and hexahydrated systems, tetracoordinated structures are stable. The hexahydrated system is similar in structure to the hydrated chloride cluster. The thermodynamic quantities (enthalpies and free energies) of the clusters are in good agreement with the experimental values. The electronic properties induced by hydration are similar to hydrated chloride anions. The charge-transfer-to-solvent energies of these hydrated-hydroxide anions are discussed, and the predicted ir spectra are used to explain the experimental data in terms of the cluster structures. The low-energy barriers between the conformations along potential energy surfaces are reported.     

Approaching the basis set limit for transition metal compounds with highly polar bonds: a benchmark coupled-cluster study of the ScF3 and FeF3 molecular structures and spectra

The molecular equilibrium geometries, quadratic and cubic force constants, vibrational frequencies, and infrared intensities of scandium and iron trifluorides are determined ab initio with a sequence of atomic natural orbital basis sets using the CCSD(T) treatment of electron correlation. The largest basis set of spdf ghi quality contains 462 contracted Gaussian functions. Relativistic corrections are applied to compute the equilibrium geometries and vibrational frequencies. The cubic force constants are used to estimate vibrational corrections to the effective r(g) internuclear distances determined in the gas electron diffraction experiments. The computed molecular properties are extrapolated to the complete basis-set limit. The predicted values are compared to the available experimental data; uncertainties and inconsistencies in these data are then discussed.     

Review of chemical methods for the determination of penicillin

The published methods for the analysis of penicillin are classified according to whether they are intended a) to differentiate between types of penicillin, or b) to determine the total penicillins present in a given sample.The limitations of many of these methods are indicated, and those which are attractive for possible routine application are discussed in detail.     

Oscillatory behavior of rare-gas atoms in SWCNT

In this paper, we have investigated both the process of rare-gas atoms (He, Ne, Ar, Kr, Xe) injected into single-wall carbon nanotube (SWNT) and the mechanical oscillatory behavior of rare-gas atoms sliding in a SWCNT by using molecular dynamics simulations. The minimal diameters of SWCNT to encapsulate rare-gas atoms are obtained, which are from 6.246 to 7.828 A. The threshold energies to encapsulate rare-gas atoms in SWCNT are also presented, which are less than 0.15 eV/atom. The oscillatory frequencies of the encapsulated atoms in zigzag SWCNT have been studied. The oscillatory frequencies are insensitive to the initial kinetic energy, but they are sensitive to the lengths and the radius of the tube, and they decrease as the length and the radius of the tube increases.     

Light driving force for surface patterning on azobenzene-containing polymers

In this paper, we investigated the effect of light driving force induced surface deformation on azobenzene-containing polymers. The surface deformation is attributed to light-induced mass migration inside the polymers. Circular cap arrays are firstly fabricated by high power laser ablation via polarization controlled three-beam interference. The circular caps are subsequently exposed to polarization controlled two-beam interfering field. The results illuminate that when the interfering laser beams are both set to P polarization, the circular caps are deformed. While the laser beams are of other interfering modes like (S, S) and (+45° , -45°), the caps are seldom deformed. The circular caps are also exposed to single intensity-homogeneous linearly polarized laser beam. The deformation of the caps keeps the same direction as the irradiating polarization. A model based on the focusing effect of the circular caps is addressed to explain the origin of the light driving force for mass migration in azopolymers. The all-optical approach for the production of deformed caps can be used to generate aspherical lens, which may be applied to many domains.     

Mid-IR spectra of different conformers of phenylalanine in the gas phase

The experimental mid- and far-IR spectra of six conformers of phenylalanine in the gas phase are presented. The experimental spectra are compared to spectra calculated at the B3LYP and at the MP2 level. The differences between B3LYP and MP2 IR spectra are found to be small. The agreement between experiment and theory is generally found to be very good, however strong discrepancies exist when -NH2 out-of-plane vibrations are involved. The relative energies of the minima as well as of some transition states connecting the minima are explored at the CCSD(T) level. Most transition states are found to be less than 2000 cm(-1) above the lowest energy structure. A simple model to describe the observed conformer abundances based on quasi-equilibria near the barriers is presented and it appears to describe the experimental observation reasonably well. In addition, the vibrations of one of the conformers are investigated using the correlation-corrected vibrational self-consistent field method.     

Optical, tsvetometric, and acid-base characteristics of methyl orange

The optical and tsvetometric characteristics of 4-dimethylaminoazobenzen-4′-sulphoacid (methyl orange, MO) in water solutions at pH 2–9 are studied. The equations of calibration plots of the dependence of colorimetric functions on concentration are obtained and calculated as molar coefficients of colorimetric functions. The method determines The constants of MO dissociation at an ionic force of 0.01–0.2 are determined by spectrophotometry; they are given to an ionic force of 0 and are compared to the literature data. The advantages of tsvetometry over spectrophotometry are shown in determining the MO concentration.     

三氯锗丙酸及其衍生物自组装单分子膜的制备与表征

首次制备了三氯锗丙酸及其酯类衍生物(Cl₃GeCH₂CH₂COOC_nH_2n+1,n=0,2,4,6)在羟基化的单晶硅片上的自组装单分子膜,并利用接触角测量、椭圆偏振和光电子能谱法进行结构表征.结果表明,这类分子的自组装行为与三氯硅烷相似,组装后在基底表面形成准二维锗烷网状排布;分子链轴有一定倾斜角;膜表面润湿性随表征液体和三氯锗丙酸尾链取代基不同而不同.     

The application of normal coordinate analysis to INS spectra

The limitations, advantages and methodology of NCA applied to INS are presented. Additional effects due to harmonics and molecular recoil are discussed with some examples. The ability to find the best molecular model using INS is exemplified and some recent examples of this are discussed. Future possibilities and extensions are also suggested.     

MIMOTOPES,CONTINUOUS PARATOPES AND HYDROPATHIC COMPLEMENTARITY: NOVEL APPROXIMATIONS IN THE DESCRIPTION OF IMMUNOCHEMICAL SPECIFICITY

Most antigenic sites of proteins, known as discontinuous epitopes, are made up of residues on different loops that are brought together by the folding of the polypeptide chain. The individual loops are sometimes able, on their own, to bind to the antibody and they are then known as continuous epitopes. The binding sites of antibodies, known as paratopes, are built up from residues on six hypervariable loops known as complementarity determining regions (CDRs). Peptides corresponding to individual CDR loops are often able to bind the antigen and such peptides may be viewed as continuous paratopes. Using random combinatorial peptide libraries, it is possible to obtain peptides that bind to an antiprotein antibody without showing any sequence similarity with any part of the protein. Such epitope mimics are called mimotopes provided they are able also to elicit antibodies that react with the original antigen. The binding activity of mimotopes may partly be due to the phenomenon of hydropathic complementarity between epitope and paratope peptides. Although these concepts are vague in their structural connotation, they are useful for describing the immunological activity of linear peptides.     

UV spectra and excitation delocalization in DNA: influence of the spectral width.

The singlet excited states of the model DNA duplex (dA)10.(dT)10 are studied. Calculations are performed in the exciton theory framework. Molecular dynamics calculations provide the duplex geometry. The dipolar coupling is determined using atomic transition charges. The monomer transition energies are simulated by Gaussian functions resembling the absorption bands of nucleosides in aqueous solutions. Most of the excited states are found to be delocalized over at least two bases and result from the mixing of different monomer states. Their properties are only weakly affected by conformational changes of the double helix. On average, the highest oscillator strength is carried by the upper eigenstates. The duplex absorption spectra are shifted a few nanometers to higher energies with respect to the spectra of noninteracting monomers. The states with larger spatial extent are located close to the maximum of the absorption spectrum.     

Role of resonances in building cross sections: Comparison between the Mittag–Leffler and the T‐matrix Green function expansion approaches

Peaks in collision cross sections are often interpreted as resonances. The complex dilation method, as well as other methods relying on analytic continuation of the scattering formalism, can be used to clarify whether these structures are true resonances in the sense that they are poles of the S‐matrix and the associated Green function. The performance of the Mittag–Leffler expansion and T‐matrix Green function expansion methods are formally and computationally compared. The two methods are applied to two model potentials. Eigenenergies, s‐wave residues, and cross sections are computed with both methods. The resonance contributions to the cross sections are further analyzed by removing the residue contributions from the Mittag–Leffler and Green function expansion sums, respectively. It is suggested that the contribution of a resonance to a cross section should be defined through its S‐matrix residue. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

Theoretical investigation of perylene dimers and excimers and their signatures in X-ray diffraction

The structures of the ground and excimer states of perylene pairs are calculated [using density functional theory (DFT) and time-dependent DFT techniques] in a free as well as a crystal environment, and their spectroscopic properties are studied for the most stable configurations. The vertical transition energies for the absorption and emission bands are obtained, and they are in good agreement with experimental data. In these calculations, up to six excited states are considered. With the calculated structures of the ground and excimer states, the scattering factors are analyzed as a function of the concentration of excimers in a crystal. The intensity of the 110, 005, and 0 10 0 reflections are found to be fairly sensitive to the presence of excimers in the crystal. The finite (nanosecond) lifetime of the excimer may make it possible to observe this state using time-resolved X-ray diffraction techniques.     

Line tension action on 2D networks of gold nanoparticles obtained by the Bubble Deposition Method

The self-assembling properties of surfactant black films are used to obtain sizeable, dense islands of nanoparticles. Using the "Bubble Deposition Method" (BDM) these films are transferred onto solid substrates. The organisation within the islands evolves when the films are allowed to equilibrate before deposition. The results on model gold particles are discussed in terms of line tension.     

A new determination of the structure of water at 25°C

The results of a new neutron diffraction experiment to measure the structure of water are presented. The data, measured at the McMaster Nuclear Reactor, are of a high quality and are analysed to yield the hydrogen-hydrogen pair correlation function using a subtraction procedure which has been used in previous experiments of this kind. This procedure circumvents the necessity of applying inelasticity corrections. The results are in good agreement with earlier work and serve to establish the general correctness of the subtraction procedure when used to determine hydrogen correlations. The data are further analysed to yield separate oxygen-hydrogen and oxygen-oxygen partial structure factors for liquid water. For the second part of the analysis an effective mass model of the dynamic scattering law is used, with the model parameter, the effective mass of the scattering particle, chosen by a least-squares fit to the measured differential cross sections. The final pair correlation functions are obtained using a maximum entropy analysis of the structure functions.     

Catalytic hydrogen production at cobalt centres

The catalytic properties of a wide range of cobalt complexes with respect to proton reduction are discussed. Electrocatalytic as well as photocatalytic systems are addressed and to allow comparison between the different systems reported considerable attention is paid to the reaction conditions used. For the photocatalytic proton reduction a range of ruthenium, iridium and rhenium complexes are discussed as potential photosensitizers. The photocatalytic systems are discussed in detail and issues such as the nature of the sacrificial agent and the solvents used. Both intermolecular and intramolecular photocatalysis are considered. The results obtained are considered with respect to the need to the development of sustainable energy sources.