Lithium cluster anions: photoelectron spectroscopy and ab initio calculations

Structural and energetic properties of small, deceptively simple anionic clusters of lithium, Li(n)(-), n = 3-7, were determined using a combination of anion photoelectron spectroscopy and ab initio calculations. The most stable isomers of each of these anions, the ones most likely to contribute to the photoelectron spectra, were found using the gradient embedded genetic algorithm program. Subsequently, state-of-the-art ab initio techniques, including time-dependent density functional theory, coupled cluster, and multireference configurational interactions methods, were employed to interpret the experimental spectra.     

Photoelectron spectroscopy and Ab initio study of the structure and bonding of Al7N- and Al7N

The electronic and geometrical structures of Al7N- are investigated using photoelectron spectroscopy and ab initio calculations. Photoelectron spectra of Al7N- have been obtained at three photon energies with six resolved spectral features at 193 nm. The spectral features of Al7N- are relatively broad, in particular for the ground state transition, indicating a large geometrical change from the ground state of Al7N- to that of Al7N. The ground state vertical detachment energy is measured to be 2.71 eV, whereas only an upper limit of approximately 1.9 eV can be estimated for the ground state adiabatic detachment energy due to the broad detachment band. Global minimum searches for A7N- and Al7N are performed using several theoretical methods. Vertical electron detachment energies are calculated using three different methods for the lowest energy structure and compared with the experimental data. Calculated results are in excellent agreement with the experimental data. The global minimum structure of Al7N- is found to possess C3v symmetry, which can be viewed as an Al atom capping a face of a N-centered Al6N octahedron. In the ground state of Al7N, however, the capping Al atom is pushed inward with the three adjacent Al-Al distances being stretched outward. Thus, even though Al7N still possesses C3v symmetry, it is better viewed as a N-coordinated by seven Al atoms in a cage-like structure. The chemical bonding in Al7N- is discussed on the basis of molecular orbital and natural bond analysis.     

Flexible H2O2 in water: electronic structure from photoelectron spectroscopy and ab initio calculations

The effect of hydration on the electronic structure of H(2)O(2) is investigated by liquid-jet photoelectron spectroscopy measurements and ab initio calculations. Experimental valence electron binding energies of the H(2)O(2) orbitals in water are, on average, 1.9 eV red-shifted with respect to the gas-phase molecule. A smaller width of the first peak was observed in the photoelectron spectrum from the solution. Our experiment is complemented by simulated photoelectron spectra, calculated at the ab initio level of theory (with EOM-IP-CCSD and DFT methods), and using path-integral sampling of the ground-state density. The observed shift in ionization energy upon solvation is attributed to a combination of nonspecific electrostatic effects (long-range polarization) and of the specific interactions between H(2)O(2) and H(2)O molecules in the first solvation shell. Changes in peak widths are found to result from merging of the two lowest ionized states of H(2)O(2) in water due to conformational changes upon solvation. Hydration effects on H(2)O(2) are stronger than on the H(2)O molecule. In addition to valence spectra, we report oxygen 1s core-level photoelectron spectra from H(2)O(2)(aq), and observed energies and spectral intensities are discussed qualitatively.     

Ionization of aqueous cations: photoelectron spectroscopy and ab initio calculations of protonated imidazole

Photoelectron spectroscopy and ab initio calculations employing a nonequilibrium polarizable continuum model were employed for determining the vertical ionization potential of aqueous protonated imidazole. The experimental value of 8.96 eV is in in excellent agreement with calculations, which also perform quantitatively for ionization of aqueous alkali cations as benchmark species. The present results show that protonation of imidazole increases its vertical ionization potential up in water by 0.7 eV, which is significantly larger than the resolution of the experiment or the error of the calculation. This combined experimental and computational approach may open the possibility for quantitatively analyzing the protonation state of histidine, of which imidazole is the titratable side chain group, in aqueous peptides and proteins.     

Microscopic solvation of NaBO2 in water: anion photoelectron spectroscopy and ab initio calculations

We investigated the microscopic solvation of NaBO(2) in water by conducting photoelectron spectroscopy and ab initio studies on NaBO(2)(-)(H(2)O)(n) (n = 0-4) clusters. The vertical detachment energy (VDE) of NaBO(2)(-) is estimated to be 1.00 ± 0.08 eV. The photoelectron spectra of NaBO(2)(-)(H(2)O)(1) and NaBO(2)(-)(H(2)O)(2) are similar to that of bare NaBO(2)(-), except that their VDEs shift to higher electron binding energies (EBE). For the spectra of NaBO(2)(-)(H(2)O)(3) and NaBO(2)(-)(H(2)O)(4), a low EBE feature appears dramatically in addition to the features observed in the spectra of NaBO(2)(-)(H(2)O)(0-2). Our study shows that the water molecules mainly interact with the BO(2)(-) unit in NaBO(2)(-)(H(2)O)(1) and NaBO(2)(-)(H(2)O)(2) clusters to form Na-BO(2)(-)(H(2)O)(n) type structures, while in NaBO(2)(-)(H(2)O)(3) and NaBO(2)(-)(H(2)O)(4) clusters, the water molecules can interact strongly with the Na atom, therefore, the Na-BO(2)(-)(H(2)O)(n) and Na(H(2)O)(n)···BO(2)(-) types of structures coexist. That can be seen as an initial step of the transition from a contact ion pair (CIP) structure to a solvent-separated ion pair (SSIP) structure for the dissolution of NaBO(2).     

Chemical bonding in Si5(2-) and NaSi5(-) via photoelectron spectroscopy and ab initio calculations

Photoelectron spectroscopy and ab initio calculations are used to investigate the electronic structure and chemical bonding of Si5(-) and Si5(2-) in NaSi5(-). Photoelectron spectra of Si5(-) and NaSi5(-) are obtained at several photon energies and are compared with theoretical calculations at four different levels of theory, TD-B3LYP, R(U)OVGF, UCCSD(T), and EOM-CCSD(T), all with 6-311+G(2df) basis sets. Excellent agreement is observed between experiment and theory, confirming the obtained ground-state structures for Si5(-) and Si5(2-), which are both found to be trigonal bipyramid with D3h symmetry at several levels of theory. Chemical bonding in Si5, Si5(-), and Si5(2-) is analyzed using NPA, molecular orbitals, ELF, and NICS indices. The bonding in Si5(2-) is compared with that in the isoelectronic and isostructural B5H5(2-) species, but they are found to differ due to the involvement of electron densities, which are supposed to be lone pairs in the skeletal bonding in Si5(2-).     

The molecular energy levels of the azoles: A study by photoelectron spectroscopy and ab initio molecular orbital calculations

HeI photoelectron spectroscopy and ab initio calculations have been applied to the azoles, providing sets of energy levels that correlate well with each other in the upper valence shell region. Observed IPs are assigned to the three π- and to the five o-levels that involve (principally) valence shell p orbitals. The observed vibration structure is not particularly informative as an aid to assignment since both π-and σ-levels give some bands with vibration structure. The calculations provide in addition to eigenvalues (energy levels) a set of eigenvectors, permitting analysis of the bonding characteristics of the levels, and trends apparent within the series.     

Accurate determination of the structure of cyclooctatetraene by femtosecond rotational coherence spectroscopy and ab initio calculations

We combine femtosecond time-resolved rotational coherence spectroscopy with high-level ab initio theory to obtain accurate structural information for the nonpolar antiaromatic molecule 1,3,5,7-cyclooctatetraene (C8H8, COT) and its perdeuterated isotopomer COT-d8 (C8D8). We measure the rotational B0 and centrifugal distortion constants D(J), D(JK) of the v = 0 states of COT and COT-d8 to high accuracy, e.g. B0 (COT) = 2710.329(56) MHz, as well as B(v) for the v = 1 states nu6, nu11, nu17, nu22, and nu41/nu42 of COT. The experimental rotational constants are compared to those obtained from calculations at the coupled-cluster with single, double, and perturbative triples [CCSD(T)] level. The latter also take into account vibrational averaging effects of the ground and vibrationally excited states. Combining the experimental and calculated rotational constants with the calculated equilibrium bond lengths and angles allows us to determine accurate equilibrium structure parameters, e.g., r(e) (C-C) = 147.0 +/- 0.05 pm, r(e) (C=C) = 133.7 +/- 0.1 pm, and r(e) (C-H) = 107.9 +/- 0.1 pm. The equilibrium C-C and C=C bond lengths of COT are compared to those of 1,3-butadiene. The expected effect of decreased pi-electron delocalization due to the twisting of adjacent C=C double bonds in COT relative to butadiene is observed for the C-C bonds but not for the C=C bonds.     

Accurate determination of the structure of cyclohexane by femtosecond rotational coherence spectroscopy and ab initio calculations

We combine femtosecond time-resolved rotational coherence spectroscopy with high-level ab initio theory to obtain accurate structural information for the nonpolar molecules cyclohexane (C(6)H(12)) and cyclohexane-d(12) (C(6)D(12)). We measured the rotational B(0) and centrifugal distortion constants D(J), D(JK) of the v = 0 states of C(6)H(12) and C(6)D(12) to high accuracy, for example, B(0)(C(6)H(12)) = 4306.08(5) MHz, as well as B(v) for the vibrationally excited states ν(32), ν(6), ν(16) and ν(24) of C(6)H(12) and additionally ν(15) for C(6)D(12). To successfully reproduce the experimental RCS transient, the overtone and combination levels 2ν(32), 3ν(32), ν(32) + ν(6), and ν(32) + ν(16) had to be included in the RCS model calculations. The experimental rotational constants are compared to those obtained at the second-order M?ller-Plesset (MP2) level. Combining the experimental and calculated rotational constants with the calculated equilibrium bond lengths and angles allows determination of accurate semiexperimental equilibrium structure parameters, for example, r(e)(C-C) = 1.526 ± 0.001 ?, r(e)(C-H(axial)) = 1.098 ± 0.001 ?, and r(e)(C-H(equatorial)) = 1.093 ± 0.001 ?. The equilibrium C-C bond length of C(6)H(12) is only 0.004 ? longer than that of ethane. The effect of ring strain due to the unfavorable gauche interactions is mainly manifested as small deviations from the C-C-C, C-C-H(axial), and C-C-H(equatorial) angles from the tetrahedral value.     

Molecular structure and rotational isomerism in glyoxylicacid from microwave spectroscopy and ab initio calculations

An improved substitution structure for glyoxylic acid in the hydrogen bonded trans-1 form is presented. By means of microwave double resonance spectroscopy, the trans-2 form, with a zig-zag chain of atoms HOCCH, was identified. Using trans-2 dipole moment components calculated by ab initio SCF theory, the energy of the trans-2 form is found to be 1.2 ± 0.5 kcal mole^?1 higher than that of the trans-1 form. The ab initio energy difference (?1.0 kcal mole^?1) has the wrong sign.     

Probing the low-barrier hydrogen bond in hydrogen maleate in the gas phase: a photoelectron spectroscopy and ab initio study

The strength of the low-barrier hydrogen bond in hydrogen maleate in the gas phase was investigated by low-temperature photoelectron spectroscopy and ab initio calculations. Photoelectron spectra of maleic and fumaric acid monoanions (cis-/trans-HO(2)CCH=CHCO(2)(-)) were obtained at low temperatures and at 193 nm photon energy. Vibrational structure was observed for trans-HO(2)CCH=CHCO(2)(-) due to the OCO bending modes; however, cis-HO(2)CCH=CHCO(2)(-) yielded a broad and featureless spectrum. The electron binding energy of cis-HO(2)CCH=CHCO(2)(-) is about 1 eV blue-shifted relative to trans-HO(2)CCH=CHCO(2)(-) due to the formation of intramolecular hydrogen bond in the cis-isomer. Theoretical calculations (CCSD(T)/ aug-cc-pVTZ and B3LYP/aug-cc-pVTZ) were carried out to estimate the strength of the intramolecular hydrogen bond in cis-HO(2)CCH=CHCO(2)(-). Combining experimental and theoretical calculations yields an estimate of 21.5 +/- 2.0 kcal/mol for the intramolecular hydrogen bond strength in hydrogen maleate.     

Stereoelectronic structure of methoxyphenyltrichlorostannanes by the results of ab initio calculations

The RHF/3-21G* and MP2/3-21G* levels were implemented for the study of the stereoelectronic structure of 2- and 4-methoxyphenyl- and 2,6-dimethoxyphenyltrichlorostannanes. In the 4-methoxyphenyltrichlorostannane the Sn atom is tetracoordinated, while in 2-methoxy- and 2,6-dimethoxyphenyltrichlorostannanes it is pentacoordinated due to the intramolecular interaction of the O atom with it. In this case a closure occurs of a 4-membered ring. In the last molecule, the Sn atom interacts almost exclusively with only one of the O atoms. The intramolecular interaction between the Sn and O atoms leads to the electron density transfer from C and H atoms of the methoxy groups as well as from the Sn atom to the atoms of its coordination polyhedron. As a result the electron density increases also on the O atom involved in this interaction.     

Conformational studies of Phe-rich foldamers by VCD spectroscopy and ab initio calculations

Employing VCD spectroscopy, we demonstrate that the structural behavior of the oligomers Boc-(L-Phe-L-Oxd)(n)-OBn is similar from n = 2 to n = 6; ab initio calculations for the n = 1 case provide physical insight into the conformational properties. Further information is gained by IR, (1)H NMR, and ECD spectroscopies. ECD spectra suggest the presence of different conformations between n = 1 on one side and longer chain foldamers on the other side. VCD and absorption IR spectra in methanol solutions can be interpreted as indicative of a PPII structure. In the case of Boc-L-Phe-L-Oxd-OBn, VCD spectra in CCl(4) and detailed DFT computational analysis allow one to demonstrate that the most populated conformers exhibit backbone dihedral angles similar to those of a PPII geometry. This is a remarkable outcome, as we had previously demonstrated that the Boc-(L-Ala-D-Oxd)(n)-OBn series folds in a β-band ribbon spiral that is a subtype of the 3(10) helix.     

Excited-state structure and vibrations of p-diaminobenzene studied by ab initio calculations

The structures and vibrations of p-diaminobenzene (PDAB) in the S₀ and S₁ states have been studied by ab initio quantum-chemical calculations. Results from geometry optimization show that the two stable cis and trans conformers of PDAB are non-planar in the S₀ state. Upon electronic excitation to the S₁ state, enhanced interaction between the ring and the amino substituent causes the molecule to become planar and contract along the long in-plane axis. A detailed analysis of the normal vibrations of PDAB in both states has been done on the basis of the motions of individual atoms as well as reduced masses, force constants and frequencies. The computed frequencies are in reasonably good agreement with the available experimental data.     

Conformational analysis of N-methylglycine and N,N-dimethylglycine by ab initio calculations

Eight of the most stable conformers of N-methylglycine (NMG) and five of N,N-dimethylglycine (DMG) were analyzed by high level ab initio calculations. Since NMG has only one amino hydrogen and a carboxylic acid hydrogen, it is capable of the formation of various types of hydrogen-bonded conformers and as a result is ideally suited to studying the importance of hydrogen-bonding on the relative stabilities of the various types of conformers of glycine and N-alkylated glycines. Comparisons of the relative energies of the various NMG and DMG conformers that have different types and number of hydrogen bonds (H-bonds) reveal the importance of hydrogen bonds to the stability of the different types of conformers. For NMG, conformer Ib which has two types of H-bonds and a dipole moment of 1.2 debyes is the most stable. Conformer Ib is similar to that of the most stable conformer of glycine. For DMG, on the other hand, IIc is the most stable conformer. IIc has a dipole moment of 5.6 debyes (compared to a value of 1.1 debyes for another of its conformers, Ic) and only one H-bond which involves the carboxylic acid and amino functionalities. The stability of IIc is attributed to the relative strength of the type H-bond formed — a similar type H-bond of glycine and NMG is predicted to be weaker. Thus, for a particular conformer, the relative strength and number of possible H-bonds that can be formed, and not necessarily the magnitude of the dipole moment, play key roles in the relative stability of amino acid conformers in the gas phase.     

Electronic states and nature of bonding in the molecule YN by all-electron ab initio CASSCF calculations

In the present work, we present results of all-electron ab initio CASSCF calculations of nine electronic states of the molecule YN. Also reported are the spectroscopic constants derived on the basis of the calculated potential energies. The predicted electronic ground state is ¹∑⁺, and this state is found to be separated from the excited states ³∑⁺, ³Π, and ¹Π by 5177, 9290, and 9915 cm^?1, respectively. The chemical bond in the YN molecule is polar with charge transfer from Y to N, giving rise to a dipole moment of 8.19 Debye at 3.3 au in the ¹∑⁺ ground state is basically a double bond composed of two π bonds. The dissociation energy of the YN molecule has been derived as 4.59 eV. © 1993 John Wiley & Sons, Inc.     

Crystal structure, Raman spectroscopy, and ab initio calculations of a new bialkali alanate K2LiAlH6

A new bialkali alanate K2LiAlH6 was synthesized at 320-330 degrees C and 100-700 bar. It was structurally characterized by powder X-ray diffraction. It crystallizes in space group R3m (No. 166) with unit cell parameters a = 5.62068(8) and c = 27.3986(6) A. The Li and K cation sites are mutually exclusive, and Rietveld refinement finds no cation mixing. First-principles total energy calculations were performed for nine competing database structures of the stoichiometry A2BCX6, taken from fluoride and oxide compounds in the Inorganic Crystal Structure Database (ICSD). The relaxed structures were compared via their total energies and their agreement with experimental diffraction spectra. Two database structures K2LiAlF6 (R3m) and Cs2NaAlF6 (C2/m) were found to have the lowest total energies, but with the Rietveld method the K2LiAlF6 structure type was shown to be the most favorable. Ab initio total energy calculations support the validity of the structure determination. First-principles calculations also indicate that cation mixing is energetically unfavorable. Hydride properties such as plateau pressure are therefore more difficult to manipulate through alloying in this class of compounds.     

Electronic structure and excitations in oligoacenes from ab initio calculations

Oligoacenes C(4n+2)H(2n+4) (n=2,...,6) are studied using a variety of ab initio methods. Density functional theory (DFT) optimized geometries were in good agreement with experiment. Vertical and adiabatic ionization potentials and electron affinities were computed with DFT and it was found that standard exchange-correlation (xc) functionals underestimate ionization potentials in oligoacenes. Possible reasons for this underestimation are discussed. Low lying electronic excitations were computed using time-dependent density functional theory, configuration interaction singles, and configuration interaction singles with approximate treatment of doubles. In agreement with earlier work, time-dependent DFT in conjunction with standard xc-energy functionals substantially underestimates the lowest (p) singlet-singlet electronic transition.     

Electronic state spectroscopy of c-C5F8 explored by photoabsorption, electron impact, photoelectron spectroscopies and ab initio calculations

The electronic transitions and resonance-enhanced vibrational excitations of octafluorocyclopentene (c-C5F8) have been investigated using high-resolution photoabsorption spectroscopy in the energy range 6-11 eV. In addition, the high-resolution electron energy loss spectrum (HREELS) was recorded under the electric dipolar excitation conditions (100 eV incident energy, approximately 0 degrees scattering angle) over the 5-14 eV energy loss range. A He(I) photoelectron spectrum (PES) has also been recorded between 11 and 20 eV, allowing us to derive a more precise value of (11.288 +/- 0.002) eV for the ground neutral state adiabatic ionization energy. All spectra presented in this paper represent the first and highest resolution data yet reported for octafluorocyclopentene. Ab initio calculations have been performed for helping in the assignment of the spectral bands for both neutral excited states and ionic states.     

Insights into the structure of cyclohexane from femtosecond degenerate four-wave mixing spectroscopy and ab initio calculations

In this paper, we report the use of femtosecond time-resolved degenerate four-wave mixing rotationally resolved spectroscopy to obtain very accurate structural information on the symmetric top cyclohexane. Apart from highlighting the versatility of this method in determining accurate structures of large and complex molecules without dipole moment, the present study also details the comparison of the experimentally determined rotational constant B(0) with that obtained from high-level ab initio calculations. The theoretical calculations, which were carried out at both the second-order M?ller-Plesset (MP2) and coupled-cluster with single, double, and perturbative triple substitutions [CCSD(T)] levels of theory, also take into account vibrational averaging effects. A detailed investigation of the vibrational averaging effects reveals that the corrections emerge from only the six highly symmetric A(1g) modes, a justification of which is provided by an analysis of these modes.