A Highly Sensitive and Selective Fluorescence Chemosensor for Cu2+ and Zn2+ Based on Solvent Effect

A novel fluorescence chemosensor 1 based on (R)‐binaphthyl‐salen can exhibit highly sensitive and selective recognition responses toward Cu²⁺ by "turn‐off" fluorescence quench type in THF/H₂O, and Zn²⁺ by "turn‐on" fluorescence enhancement type in CHCl₃/CH₃CN, respectively, suggesting that solvents can dramatically affect the responsive properties of salen‐based chemosensor. In addition, Cu²⁺ can lead to the most pronounced changes of CD spectra without the influence of solvents, which indicates this kind chemosensor can also be used as a sole Cu²⁺ probe based on CD spectra.     

A Water Soluble Pd2L4 Cage for Selective Binding of Neu5Ac

The sialic acid N-acetylneuraminic acid (Neu5Ac) and its derivatives are involved in many biological processes including cell-cell recognition and infection by influenza. Molecules that can recognize Neu5Ac might thus be exploited to intervene in or monitor such events. A key obstacle in this development is the sparse availability of easily prepared molecules that bind to this carbohydrate in its natural solvent; water. Here, we report that the carbohydrate binding pocket of an organic soluble [Pd₂L₄]⁴⁺ cage could be equipped with guanidinium-terminating dendrons to give the water soluble [Pd₂L₄][NO₃]₁₆ cage 7 . It was shown by means of NMR spectroscopy that 7 binds selectively to anionic monosaccharides and strongest to Neu5Ac with K_a=24 M⁻¹. The cage had low to no affinity for the thirteen neutral saccharides studied. Aided by molecular modeling, the selectivity for anionic carbohydrates such as Neu5Ac could be rationalized by the presence of charge assisted hydrogen bonds and/or the presence of a salt bridge with a guanidinium solubilizing arm of 7 . Establishing that a simple coordination cage such as 7 can already selectively bind to Neu5Ac in water paves the way to improve the stability, affinity and/or selectivity properties of M₂L₄ cages for carbohydrates and other small molecules.     

Switching Ca2+/Ba2+ to Ba2+/Ca2+ Potentiometric Selectivities of Podands with Phosphoryl-containing Terminal Groups: A Molecular Modelling Study

It has been shown experimentally that theCa²⁺/Ba²⁺ potentiometric selectivity ofphosphoryl-containing podandR–-O–-(CH₂–-CH₂–-O)_nndash;-R,R = –-C₆H₄–-P(O)Ph₂, n = 3 (I),switches to Ba²⁺/Ca²⁺ when the ligand containsthe longer polyether chain, n = 5 (II). Here, we reportmolecular dynamics and free energy perturbation simulationsperformed using the amber 4.1 program on the complexesL ^.M²⁺ (M²⁺ = Ca²⁺, Sr²⁺ andBa²⁺, L = I and II) in the gas phase inorder to gain a microscopic insight into structural and energy bindingproperties of podands as a function of n. Mixed QM/MM (PM3/ amber) calculations were performed toanalyse the role of polarisation effects on the complexation selectivityof podands. It isshown that an increase of n does not affect the interactions ofM²⁺ with phosphine oxide groups,but leads to less efficient interactions of small cations with the polyether chain. Calculatedpotentiometric selectivities of I (Ca²⁺ > Ba²⁺)and II (Ba²⁺ > Ca²⁺) are in agreement with the experimental data.     

Interaction Structure and Affinity of Zwitterionic Amino Acids with Important Metal Cations (Cd2+, Cu2+, Fe3+, Hg2+, Mn2+, Ni2+ and Zn2+) in Aqueous Solution: A Theoretical Study

Heavy metals are non-biodegradable and carcinogenic pollutants with great bio-accumulation potential. Their ubiquitous occurrence in water and soils has caused serious environmental concerns. Effective strategies that can eliminate the heavy metal pollution are urgently needed. Here the adsorption potential of seven heavy metal cations (Cd²⁺, Cu²⁺, Fe³⁺, Hg²⁺, Mn²⁺, Ni²⁺ and Zn²⁺) with 20 amino acids was systematically investigated with Density Functional Theory method. The binding energies calculated at B3LYP-D3/def2TZVP level showed that the contribution order of amino acid side chains to the binding affinity was carboxyl > benzene ring > hydroxyl > sulfhydryl > amino group. The affinity order was inversely proportional to the radius and charge transfer of heavy metal cations, approximately following the order of: Ni²⁺ > Fe³⁺ > Cu²⁺ > Hg²⁺ > Zn²⁺ > Cd²⁺ > Mn²⁺. Compared to the gas-phase in other researches, the water environment has a significant influence on structures and binding energies of the heavy metal and amino acid binary complexes. Collectively, the present results will provide a basis for the design of a chelating agent (e.g., adding carboxyl or a benzene ring) to effectively remove heavy metals from the environment.     

Molecular modeling of the binding mode of chiral metal complexes △- and (A)-[Co(phen)2dppz]3+ with B-DNA

Molecular modeling methods have been applied to the structural characterization of the interaction between chiral metal complexes [Co(phen)2dppz]3+ (where phen = 1, 10-phenanthroline, dppz = dipyrido[3,2-a: 2′, 3′-c]phenazine) and the oligonucleotide (B-DNA fragment). The natures of two kinds of the binding modes, which are currently intense controversy, have been explored. Barton proposed that there is enantio-selective DNA binding by the octahedral complexes and intercalative access by these complexes from the major groove; but Norden suggested that both enantiomers bind extremely strongly to DNA from the minor groove without any noticeable enantio-selectivity. Our results support and extend structural models based upon Norden's studies, and conflict with Barton's model.