Investigation into the Regiochemistry of 1,3‐Dipolar Cycloaddition of C,N‐Diphenyl Nitrone with Some Vinyl Sulfoximines as Dipolarophile: Theoretical Studies

The regiochemistry of 1,3‐dipolar cycloaddition reactions of C,N‐diphenyl nitrone with some vinyl sulfox‐ imines as dipolarophile was investigated using density functional theory (DFT)‐based reactivity indexes and activation energy calculations at B3LYP/6‐31G(d) level of theory. Analysis of the geometries and bond orders (BOs) at the TS structures associated with the different reaction pathways shows that these 1,3‐dipolar cycloaddition reactions occur via an asynchronous concerted mechanism. Analysis of the local electrophilicity and nucleophilicity indexes permits an interpretation about the regioselectivity of these 1,3‐dipolar cycloaddition reactions. The theoretical results obtained in the work clearly predict the regiochemistry of the isolated cycloadducts and agree to experimental outcomes.     

Roles of Lewis Acid Catalysts in Diels-Alder Reactions between Cyclopentadiene and Methyl Acrylate

The Diels-Alder reaction of cyclopentadiene with methyl acrylate catalyzed by AlCl₃ has been theoretically investigated. M06-2X level DFT calculations have shown that the formation of two C−C bonds is asynchronous in the cycloaddition both in the endo path and in the exo path, thus making a good contrast to the well-known concept of [4+2] reactions based on the orbital symmetry arguments. It was found that the catalyst facilitates the cycloaddition and brings a higher endo selectivity in the highly asynchronous process, as compared with the reaction of the diene and the dienophile without the catalyst.     

Bridge‐Localized HOMO‐Binding Character of Divinylanthracene‐Bridged Dinuclear Ruthenium Carbonyl Complexes: Spectroscopic,Spectroelectrochemical, and Computational Studies

The electronic properties of four divinylanthracene‐bridged diruthenium carbonyl complexes [{RuCl(CO)(PMe₃)₃}₂(μ? CH?CHArCH?CH)] (Ar=9,10‐anthracene ( 1 ), 1,5‐anthracene ( 2 ), 2,6‐anthracene ( 3 ), 1,8‐anthracene ( 4 )) obtained by molecular spectroscopic methods (IR, UV/Vis/near‐IR, and EPR spectroscopy) and DFT calculations are reported. IR spectroelectrochemical studies have revealed that these complexes are first oxidized at the noninnocent bridging ligand, which is in line with the very small ν(C?O) wavenumber shift that accompanies this process and also supported by DFT calculations. Because of poor conjugation in complex 1 , except oxidized 1⁺ , the electronic absorption spectra of complexes 2⁺ , 3⁺ , and 4⁺ all display the characteristic near‐IR band envelopes that have been deconvoluted into three Gaussian sub‐bands. Two of the sub‐bands belong mainly to metal‐to‐ligand charge‐transfer (MLCT) transitions according to results from time‐dependent DFT calculations. EPR spectroscopy of chemically generated 1⁺ – 4⁺ proves largely ligand‐centered spin density, again in accordance with IR spectra and DFT calculations results.     

The [4+2]-Cycloaddition of α-Nitrosoalkenes with Thiochalcones as a Prototype of Periselective Hetero-Diels–Alder Reactions—Experimental and Computational Studies

The [4+2]-cycloadditions of α-nitrosoalkenes with thiochalcones occur with high selectivity at the thioketone moiety of the dienophile providing styryl-substituted 4H-1,5,2-oxathiazines in moderate to good yields. Of the eight conceivable hetero-Diels–Alder adducts only this isomer was observed, thus a prototype of a highly periselective and regioselective cycloaddition has been identified. Analysis of crude product mixtures revealed that the α-nitrosoalkene also adds competitively to the thioketone moiety of the thiochalcone dimer affording bis-heterocyclic [4+2]-cycloadducts. The experiments are supported by high-level DFT calculations that were also extended to related hetero-Diels–Alder reactions of other nitroso compounds and thioketones. These calculations reveal that the title cycloadditions are kinetically controlled processes confirming the role of thioketones as superdienophiles. The computational study was also applied to the experimentally studied thiochalcone dimerization, and showed that the 1,2-dithiin and 2H-thiopyran isomers are in equilibrium with the monomer. Again, the DFT calculations indicate kinetic control of this process.     

Enantioselective Cleavage of Cyclobutanols Through Ir-Catalyzed C−C Bond Activation: Mechanistic and Synthetic Aspects

The Ir-catalyzed conversion of prochiral tert-cyclobutanols to β-methyl-substituted ketones proceeds under comparably mild conditions in toluene (45–110 °C) and is particularly suited for the enantioselective desymmetrization of β-oxy-substituted substrates to give products with a quaternary chirality center with up to 95 % ee using DTBM-SegPhos as a chiral ligand. Deuteration experiments and kinetic isotope effect measurements revealed major mechanistic differences to related Rh^I-catalyzed transformations. Supported by DFT calculations we propose the initial formation of an Ir^III hydride intermediate, which then undergoes a β-C elimination (C−C bond activation) prior to reductive C−H elimination. The computational model also allows the prediction of the stereochemical outcome. The Ir-catalyzed cyclobutanol cleavage is broadly applicable but fails for substrates bearing strongly coordinating groups. The method is of particular value for the stereo-controlled synthesis of substituted chromanes related to the tocopherols and other natural products.     

A DFT and TD‐DFT Approach to the Understanding of Statistical Kinetics in Substitution Reactions of M3Q4 (M=Mo,W; Q=S,Se) Cuboidal Clusters

For many years it has been known that the nine water molecules in [M₃Q₄(H₂O)₉]⁴⁺ cuboidal clusters (M=Mo, W; Q=S, Se) can be replaced by entering ligands, such as chloride or thiocyanate, and kinetic studies carried out mainly on the substitution of the first water molecule at each metal centre reveal that the reaction at the three metal centres occurs with statistical kinetics; that is, a single exponential with a rate constant corresponding to the reaction at the third centre is observed instead of the expected three‐exponential kinetic trace. Such simplification of the kinetic equations requires the simultaneous fulfilment of two conditions: first that the three consecutive rate constants are in statistical ratio, and second that the metal centres behave as independent chromophores. The validity of those simplifications has been checked for the case of the reaction of [Mo₃S₄(H₂O)₉]⁴⁺ with Cl^? by using DFT and TD‐DFT theoretical calculations. The results of those calculations are in agreement with the available experimental information, which indicates that the H₂O ligands trans to the μ‐S undergo substitution much faster than those trans to the μ₃‐S. Moreover, the energy barriers for the substitution of the first water molecule at the three metal centres are close to each other, the differences being compatible with the small changes in the numerical values of the rate constants required for observation of statistical kinetics. TD‐DFT calculations lead to calculated electronic spectra, which are in reasonable agreement with those experimentally measured, but the calculations do not indicate that the three metal centres behave as independent chromophores, although the mathematical conditions required for simplification of the kinetic traces to a single exponential are reasonably well fulfilled at certain wavelengths. A re‐examination of the kinetics of the reaction by using global fitting procedures yields results, which are compatible with statistical kinetics, although an alternative interpretation in which substitution only occurs at a single metal centre under reversible conditions is also possible.     

An alternative approach to the synthesis of [1,2,4]triazolo[1,5-a]pyridine-8-carbonitriles,their crystal structure,and DFT calculations

New representatives of [1,2,4]triazolo[1,5-a]pyridine-8-carbonitriles were synthesized via the condensation of β-diketones or β-dialdehydes and characterized using MS spectrometry, ¹H, ¹³C and, ¹⁹F NMR and IR spectroscopy. Crystal structures of two compounds were established using X-ray analysis and showed that title compounds are prone to the formation of planar molecules. The absence of band responsible for CN stretching vibration in trifluoromethyl-containing compounds was explained using the DFT calculations method, which also showed a significant influence of fluorines introducing on the energy gap between HOMO and LUMO.     

Reaction of an N‐Heterocyclic Carbene‐Stabilized Silicon(II) Monohydride with Alkynes: [2+2+1] Cycloaddition versus Hydrogen Abstraction

An in depth study of the reactivity of an N‐heterocyclic carbene (NHC)‐stabilized silylene monohydride with alkynes is reported. The reaction of silylene monohydride 1 , tBu₃Si(H)Si←NHC, with diphenylacetylene afforded silole 2 , tBu₃Si(H)Si(C₄Ph₄). The density functional theory (DFT) calculations for the reaction mechanism of the [2+2+1] cycloaddition revealed that the NHC played a major part stabilizing zwitterionic transition states and intermediates to assist the cyclization pathway. A significantly different outcome was observed, when silylene monohydride 1 was treated with phenylacetylene, which gave rise to supersilyl substituted 1‐alkenyl‐1‐alkynylsilane 3 , tBu₃Si(H)Si(CH?CHPh)(C?CPh). Mechanistic investigations using an isotope labelling technique and DFT calculations suggest that this reaction occurs through a similar zwitterionic intermediate and subsequent hydrogen abstraction from a second molecule of phenylacetylene.     

A Frustrated Phosphane–Borane Lewis Pair and Hydrogen: A Kinetics Study

The energy profile of a frustrated Lewis pair (FLP) dihydrogen splitting system was determined by a combined experimental kinetic and DFT study. A trimethylene‐bridged phosphane–borane FLP was converted into its endothermic H₂‐cleavage product by sequential H⁺/H^? addition. The system could be handled at low temperature, and the kinetics of the H₂ elimination were determined to give a rate constant of k_HH,exp(299 K)=(2.87±0.1)×10^?4 s^?1 in solution. The primary kinetic isotope effects were determined; for example, (k_HH/k_DD)_exp=3.19. The system was accurately analyzed by DFT calculations.     

Systematic Evaluation of Substituted Cyclopentadienyl Ruthenium Complexes, [(η5‐C5MenH5−n)RuCl(cod)], for Catalytic Cycloadditions of Diynes

A series of η⁵‐cyclopentadienylruthenium complexes, [(η⁵‐C₅Me_nH_5?n)RuCl(cod)] (cod=1,5‐cyclooctadiene), are evaluated as catalysts for the cycloaddition of 1,6‐diynes with alkynes. As a result, we unexpectedly found that the complex bearing the 1,2,4‐Me₃Cp ligand is the most efficient catalyst in terms of turnover number (TON) for the cycloaddition of a bulky diiododiyne with acetylene, recording the highest TON of 970 with a catalyst loading of 0.1 mol %. To obtain insight into this result, we evaluate the electron richness of all complexes by cyclic voltammetric analyses, which indicate that the electron density of the ruthenium center increases with an increase in methyl substitution on the Cp′ ligands. The initial rate (up to 10 % conversion) of the cycloaddition was then measured using ¹H NMR spectroscopy. The initial rate is found to decrease as the number of methyl substituents increases. According to these results, we assumed that the optimum catalytic performance exhibited by the 1,2,4‐trimethylcyclopentadienyl complex can be attributed to its robustness under the catalytic cycloaddition conditions. The steric and electronic effects of the Cp′ ligands are also investigated in terms of the regioselectivity of the cycloaddition of an unsymmetrical diyne and in terms of the chemoselectivity in the cycloaddition of a 1,6‐heptadiyne with norbornene.     

Essential Factors for Control of the Equilibrium in the Reversible Rearrangement of M3N@Ih‐C80 Fulleropyrrolidines: Exohedral Functional Groups versus Endohedral Metal Clusters

The effects of exohedral moieties and endohedral metal clusters on the isomerization of M₃N@I_h‐C₈₀ products from the Prato reaction through [1,5]‐sigmatropic rearrangement were systematically investigated by using three types of fulleropyrrolidine derivatives and four different endohedral metal clusters. As a result, all types of derivatives provided the same ratios of the isomers for a given trimetallic nitride template (TNT) as the thermodynamic products, thus indicating that the size of the endohedral metal clusters inside C₈₀ was the single essential factor in determining the equilibrium between the [6,6]‐isomer (kinetic product) and the [5,6]‐isomer. In all the derivatives, the [6,6]‐ and [5,6]‐Prato adducts with larger metal clusters, such as Y₃N and Gd₃N, were equally stable, which is in good agreement with DFT calculations. The reaction rate of the rearrangement was dependent on both the substituent of exohedral functional groups and the endohedral metal‐cluster size. Further DFT calculations and ¹³C NMR spectroscopic studies were employed to rationalize the equilibrium in the rearrangement between the [6,6]‐ and [5,6]‐fulleropyrrolidines.     

Cycloaddition Chemistry of a Silylene-Nickel Complex toward Organic π-Systems: From Reversibility to C−H Activation

The versatile cycloaddition chemistry of the Si−Ni multiple bond in the acyclic (amido)(chloro)silylene→Ni⁰ complex 1 , [(^TMSL)ClSi→Ni(NHC)₂] (^TMSL=N(SiMe₃)Dipp; Dipp=2,6-iPr₂C₆H₄; NHC=C[(iPr)NC(Me)]₂), toward unsaturated organic substrates is reported, which is both reminiscent of and expanding on the reactivity patterns of classical Fischer and Schrock carbene–metal complexes. Thus, 1:1 reaction of 1 with aldehydes, imines, alkynes, and even alkenes proceed to yield [2+2] cycloaddition products, leading to a range of four-membered metallasilacycles. This cycloaddition is in fact reversible for ethylene, whereas addition of an excess of this olefin leads to quantitative sp²-CH bond activation, via a 1-nickela-4-silacyclohexane intermediate. These results have been supported by DFT calculations giving insights into key mechanistic aspects.     

Unsymmetrical,Cyclic Diborenes and Thermal Rearrangement to a Borylborylene

Cyclic diboranes(4) based on a chelating monoanionic benzylphosphine linker were prepared through boron–silicon exchange between arylsilanes and B₂Br₄. Coordination of Lewis bases to the remaining sp² boron atom yielded unsymmetrical sp³‐sp³ diboranes, which were reduced with KC₈ to their corresponding trans‐diborenes. These compounds were studied with a combination of spectroscopic methods, X‐ray diffraction, and DFT calculations. PMe₃‐stabilized diborene 6 was found to undergo thermal rearrangement to gem‐diborene 8 . DFT calculations on 8 reveal a polar boron–boron bond, and indicate that the compound is best described as a borylborylene.     

Experimental and Theoretical Study of Phosphine-Catalyzed Reaction Modes in the Reaction of α-Substituted Allenes with Aryl Imines

A new phosphine-catalyzed reaction of α-substituted allenes with aryl imines, in stark contrast to classic cycloaddition reactions, has been developed. This reaction delivers valuable highly functionalized itaconimides with excellent stereoselectivities by a new «un-cyclizing» reaction mode involving β′-carbon of α-substituted allenes. Moreover, the present «un-cyclizing» reaction can also be carried out in a one-pot fashion and scaled up to the gram scale by using aryl aldehydes, without the need to isolate the aryl imines. Mechanistic studies and control experiments reveal the crucial role of H₂CO₃ for the present reaction mode. In addition, density functional theory (DFT) calculations were performed to understand the possible mechanism.     

Theoretical and experimental 1H, 13C and 15N NMR studies of N‐alkylation of substituted tetrazolo[1,5‐a]pyridines

The ¹⁵N as well as ¹H and ¹³C chemical shifts of nine substituted tetrazolopyridines and their corresponding tetrazolopyridinium salts have been determined by using NMR spectroscopy at the natural abundance level of all nuclei in CD₃CN. In this paper, we report, for the first time, the N‐alkylation reaction of electron deficient tetrazolopyridines. The treatment of tetrazolopyridines 5–13 with one equivalent of trialkyloxonium tetrafluoroborate leads to a mixture of two isomers, i.e. N3‐ and N2‐alkyl tetrazolo[1,5‐a]pyridinium salts. It has been observed that the N3‐isomer is always the major isomer, except in the case of the CF₃ substituent, where the two isomers are obtained in the same amount. The quaternary tetrazolopyridinium nitrogen N3 is shielded by around 100 ppm (parts per million) with respect to the parent tetrazolopyridine. Experimental data are interpreted by means of density functional theory (DFT) calculations, including solvent‐induced effects, within the conductor‐like polarizable continuum model (CPCM). Good agreements between theoretical and experimental ¹H, ¹³C and ¹⁵N NMR were found. The combination of multinuclear magnetic resonance spectroscopy with gauge including atomic orbital (GIAO) DFT calculations is a powerful tool in the structural elucidation for both neutral and cationic heterocycles and in the determination of the orientation of N‐alkylation of tetrazolopyridines. Copyright © 2009 John Wiley & Sons, Ltd.     

A Metal‐Containing N‐Heterocyclic Germylene Based on an Oxalamidine Framework

A metal‐containing N‐heterocyclic germylene based on a N‐mesityl (Mes)‐substituted oxalamidine framework is reported. The precursor (MesN=)₂C–C(–N(H)Mes)₂ ( 1 H₂) was converted into its rhodium complex [Rh(κ²N‐ 1 H₂)(cod)][OTf] ( 2 ) (cod = 1,5‐cyclooctadiene; OTf = triflate) in 62 % isolated yield. Subsequent reaction of 2 with Ge{N(SiMe₃)₂}₂ gave the crystalline N‐heterocyclic germylene [Rh(cod)(μ‐ 1 )Ge][OTf] ( 3 ) in 50 % yield. The compounds under study were fully characterized by various methods, also including X‐ray crystallographic studies on single crystals of 2 and 3 . Density functional theory (DFT) calculations revealed that π conjugation in the bridging oxalamidine framework is increased and n(N)–p(Ge) π bonding is decreased upon κ²N metal coordination; a further weakening of the Ge–N bond occurs through triflate coordination to the Ge^II atom. Nevertheless, preliminary coordination studies revealed that 3 behaves as 2‐electron (L ‐type) germylene donor ligand. Treatment of 3 with [Ir(cod)Cl]₂ furnished the heterobimetallic complex [Rh(cod)(μ‐ 1 )Ge‐Ir(cod)Cl][OTf] ( 4 ), as evidenced by NMR spectroscopic investigations and DFT calculations.     

Ligation state of nickel during CO bond activation with monodentate phosphines

The oxidative addition of phenolic electrophiles at Ni(0) in the presence of monodentate phosphine ligands was studied with both dispersion-free and dispersion-containing DFT methods. With the popular bulky ligand PCy₃, consideration of dispersion has a striking effect on the predicted ligation state of nickel during oxidative addition of aryl sulfamates. Dispersion-containing methods such as M06L indicate a clear preference for a bis-phosphine ligated transition state (TS), while dispersion free methods like B3LYP strongly favor a mono-phosphine ligated TS. This discrepancy in predicted ligation state is also found with small phosphines (PMe₃) in combination with some aryl electrophiles (carbamates, acetates, pivalates, chlorides), but a bis-PMe₃-ligated TS is predicted regardless of dispersion for other electrophiles (sulfamates, mesylates, tosylates). DFT calculations that include dispersion also offer a possible explanation for the observed poor efficacy of P^tBu₃ as a ligand in Ni-catalyzed cross-coupling reactions.     

Assessing the Influence of Mutation on GTPase Transition States by Using X‐ray Crystallography, 19F NMR,and DFT Approaches

We report X‐ray crystallographic and ¹⁹F NMR studies of the G‐protein RhoA complexed with MgF₃⁻, GDP, and RhoGAP, which has the mutation Arg85′Ala. When combined with DFT calculations, these data permit the identification of changes in transition state (TS) properties. The X‐ray data show how Tyr34 maintains solvent exclusion and the core H‐bond network in the active site by relocating to replace the missing Arg85′ sidechain. The ¹⁹F NMR data show deshielding effects that indicate the main function of Arg85′ is electronic polarization of the transferring phosphoryl group, primarily mediated by H‐bonding to O^3G and thence to P^G. DFT calculations identify electron‐density redistribution and pinpoint why the TS for guanosine 5′‐triphosphate (GTP) hydrolysis is higher in energy when RhoA is complexed with RhoGAP_Arg85′Ala relative to wild‐type (WT) RhoGAP. This study demonstrates that ¹⁹F NMR measurements, in combination with X‐ray crystallography and DFT calculations, can reliably dissect the response of small GTPases to site‐specific modifications.     

Assessing the Influence of Mutation on GTPase Transition States by Using X‐ray Crystallography, 19F NMR,and DFT Approaches

We report X‐ray crystallographic and ¹⁹F NMR studies of the G‐protein RhoA complexed with MgF₃⁻, GDP, and RhoGAP, which has the mutation Arg85′Ala. When combined with DFT calculations, these data permit the identification of changes in transition state (TS) properties. The X‐ray data show how Tyr34 maintains solvent exclusion and the core H‐bond network in the active site by relocating to replace the missing Arg85′ sidechain. The ¹⁹F NMR data show deshielding effects that indicate the main function of Arg85′ is electronic polarization of the transferring phosphoryl group, primarily mediated by H‐bonding to O^3G and thence to P^G. DFT calculations identify electron‐density redistribution and pinpoint why the TS for guanosine 5′‐triphosphate (GTP) hydrolysis is higher in energy when RhoA is complexed with RhoGAP_Arg85′Ala relative to wild‐type (WT) RhoGAP. This study demonstrates that ¹⁹F NMR measurements, in combination with X‐ray crystallography and DFT calculations, can reliably dissect the response of small GTPases to site‐specific modifications.     

Oxidative P−P Bond Addition to Cobalt(−I): Formation of a Low‐Spin Cobalt(III) Phosphanido Complex

The first homoleptic cobalt phosphanido complex [K(thf)₄][Co{1,2‐(Pt Bu₂)₂C₂B₁₀H₁₂}₂] ( 1 ) was prepared by an unprecedented oxidative P−P bond addition of an ortho ‐carborane‐substituted 1,2‐diphosphetane to cobalt(−I) in [K(thf)_0.2][Co(η⁴‐cod)₂)] (cod=1,5‐cycloctadiene). Compound 1 is a rare distorted tetrahedral 3d⁶ complex with a low‐spin ground state configuration. Magnetic measurements revealed that the complex is diamagnetic between 2 to 270 K in the solid state and at 298 K in [D₈]THF solution. Based on DFT calculations, the unusual singlet ground state is caused by the strong σ‐donor and moderate π‐donor properties of the bis(phosphanido) ligand.