Experimental and Theoretical Evidence for an Agostic Interaction in a Gold(III) Complex

The first agostic interaction in a gold complex is described. The presence of a bonding C?H???Au interaction in a cationic “tricoordinate” gold(III) complex was suggested by DFT calculations and was subsequently confirmed by NMR spectroscopy at low temperature. The agostic interaction was analyzed computationally using NBO and QTAIM analyses (NBO=natural bond orbital; QTAIM=quantum theory of atoms in molecules).     

Analyzing the Vibrational Signatures of Thiophenol Adsorbed on Small Gold Clusters by DFT Calculations

Using density functional theory, we calculate the IR and Raman signatures of the thiophenol (TP) molecule adsorbed on gold clusters by mimicking the different types of adsorption sites, and we analyze these signatures by using advanced tools implemented into the pyvib2 program. First, we follow the evolution of the vibrational normal modes from the isolated TP molecule to those of TP adsorbed on different clusters to highlight the influence of the site of adsorption on the vibrational motions. The use of the overlap matrix between the modes enables mode permutations, mode mixings, and mode splittings to be highlighted, all of which depend not only on the adsorption but also on the type of cluster and its symmetry. Second, the IR and Raman signatures were analyzed by using group coupling matrices and atomic contribution patterns based on the Hug decomposition scheme. Key results include 1) the fact that Raman spectroscopy is more sensitive than IR spectroscopy with respect to the nature of the coordination site, 2) an IR criterion that distinguishes between on‐top coordination (onefold coordinated) with respect to the bridge (twofold coordinated) and hexagonal close‐packed hollow site coordination (threefold coordinated), and 3) the best agreement to the experimental Raman spectrum with regard to signatures in the 500 to 1200 cm^?1 region is obtained for bridged, twofold coordination.     

Argon Adsorption on Cationic Gold Clusters Aun+ (n ≤ 20)

The interaction of Au_n⁺ (n ≤ 20) clusters with Ar is investigated by combining mass spectrometric experiments and density functional theory calculations. We show that the inert Ar atom forms relatively strong bonds with Au_n⁺. The strength of the bond strongly varies with the cluster size and is governed by a fine interplay between geometry and electronic structure. The chemical bond between Au_n⁺ and Ar involves electron transfer from Ar to Au, and a stronger interaction is found when the Au adsorption site has a higher positive partial charge, which depends on the cluster geometry. Au₁₅⁺ is a peculiar cluster size, which stands out for its much stronger interaction with Ar than its neighbors, signaled by a higher abundance in mass spectra and a larger Ar adsorption energy. This is shown to be a consequence of a low-coordinated Au adsorption site in Au₁₅⁺, which possesses a large positive partial charge.     

Unexpected Anion Effect in the Alkoxylation of Alkynes Catalyzed by N‐Heterocyclic Carbene (NHC) Cationic Gold Complexes

The intermolecular alkoxylation of alkynes is the oldest application of cationic gold(I) catalysts; however, no systematic experimental data about the role of the anion are available. In this contribution, the role of the anion in this catalytic reaction as promoted by a N‐heterocyclic carbene‐based gold catalyst, [(NHC)AuX] (X=BARF^?, BF₄^?, OTf^?, OTs^?, TFA^?, or OAc^?) is analyzed, through a combined experimental (NMR spectroscopy) and theoretical (DFT calculation) approach. The most important factor seems to be the ability to abstract the proton from the methanol during the nucleophilic attack, and such ability is related to the anion basicity. On the other hand, too high coordination power or basicity of the anion worsens the catalytic performance by preventing alkyne coordination or by forming too much free methoxide in solution, which poisons the catalyst. The intermediate coordinating power and basicity of the OTs^? anion provides the best compromise to achieve efficient catalysis.     

Au(II)化合物[Au(CH_2)_2PH_2]_2X_2(X=F,Cl,Br,I)的量子化学理论研究

采用从头计算HF,MP2方法和密度泛函理论,对Au(II)系列化合物[Au(CH2)2PH2]2X2(X=F,Cl,Br,I)的几何结构、电子结构和振动频率进行了研究.研究表明Au的5d和6s电子参与Au—Au以及Au—X之间的成键.Au—Au,Au—X键强烈的电子相关作用使HF方法不适于该体系的研究,BP86和B3LYP两种泛函给出较大的Au—Au和Au—X键长,而MP2方法和局域的密度泛函方法则给出了合理的结构参数.局域密度泛函方法计算得到的Au—Au键和Au—X键振动频率也与实验数据符合较好.还运用含时密度泛函理论计算了[Au(CH2)2PH2]2X2的电子激发能,对分子在紫外-可见光谱范围内的电子跃迁进行了分析,考察了卤素配体对激发能的影响,并结合分子轨道能级的变化对此给予了解释.     

Selectively Measuring π Back‐Donation in Gold(I) Complexes by NMR Spectroscopy

Even though the Dewar–Chatt–Duncanson model has been successfully used by chemists since the 1950s, no experimental methodology is yet known to unambiguously estimate the constituents (donation and back‐donation) of a metal–ligand interaction. It is demonstrated here that one of these components, the metal‐to‐ligand π back‐donation, can be effectively probed by NMR measurements aimed at determining the rotational barrier of a C?N bond (ΔH_r^≠) of a nitrogen acyclic carbene ligand. A large series of gold(I) complexes have been synthesized and analyzed, and it was found that the above experimental observables show an accurate correlation with back‐donation, as defined theoretically by the appropriate charge displacement originated upon bond formation. The proposed method is potentially of wide applicability for analyzing the ligand effect in metal catalysts and guiding their design.     

Oxadiazole‐2‐thiol Adsorption on Gold Nanorods: A Joint Theoretical and Experimental Study by Using SERS,XPS, and DFT

The chemisorption of 1,3,4‐oxadiazole‐2‐thiol (ODT) on gold nanorods has been investigated by using surface‐enhanced Raman spectroscopy (SERS) and density functional theory (DFT). Although most of the SERS spectra have remarkable similarity to the normal Raman spectra of the pure analyte, the adsorption of ODT on a gold surface leads to a drastic change in its Raman spectrum and distinct vibrational features are obtained with gold nanorods and spherical nanoparticles. Simulated Raman spectra for hybrid systems that consist of an oxadiazole moiety coordinated to a Au₂₀ gold cluster provided valuable information about the coordination mode and enabled us to assign vibration modes.     

Alkali Metal Complexes of the Dipeptides PheAla and AlaPhe: IRMPD Spectroscopy

Complexes of PheAla and AlaPhe with alkali metal ions Na⁺ and K⁺ are generated by electrospray ionization, isolated in the Fourier‐transform ion cyclotron resonance (FT–ICR) ion trapping mass spectrometer, and investigated by infrared multiple‐photon dissociation (IRMPD) using light from the FELIX free electron laser over the mid‐infrared range from 500 to 1900 cm^?1. Insight into structural features of the complexes is gained by comparing the obtained spectra with predicted spectra and relative free energies obtained from DFT calculations for candidate conformers. Combining spectroscopic and energetic results establishes that the metal ion is always chelated by the amide carbonyl oxygen, whilst the C‐terminal hydroxyl does not complex the metal ion and is in the endo conformation. It is also likely that the aromatic ring of Phe always chelates the metal ion in a cation‐π binding configuration. Along with the amide CO and ring chelation sites, a third Lewis‐basic group almost certainly chelates the metal ion, giving a threefold chelation geometry. This third site may be either the C‐terminal carbonyl oxygen, or the N‐terminal amino nitrogen. From the spectroscopic and computational evidence, a slight preference is given to the carbonyl group, in an RO_aO_t chelation pattern, but coordination by the amino group is almost equally likely (particularly for K⁺PheAla) in an RO_aN_t chelation pattern, and either of these conformations, or a mixture of them, would be consistent with the present evidence. (R represents the π ring site, O_a the amide oxygen, O_t the terminal carbonyl oxygen, and N_t the terminal nitrogen.) The spectroscopic findings are in better agreement with the MPW1PW91 DFT functional calculations of the thermochemistry compared with the B3LYP functional, which seems to underestimate the importance of the cation–π interaction.     

Au(II)化合物[Au(CH2)2PH2]2X2 (X＝F, Cl, Br, I)的量子化学理论研究

采用从头计算HF, MP2方法和密度泛函理论, 对Au(II)系列化合物[Au(CH₂)₂PH₂]₂X₂ (X＝F, Cl, Br, I)的几何结构、电子结构和振动频率进行了研究. 研究表明Au的5d和6s电子参与Au—Au以及Au—X之间的成键. Au—Au, Au—X键强烈的电子相关作用使HF方法不适于该体系的研究, BP86和B3LYP两种泛函给出较大的Au—Au和Au—X键长, 而MP2方法和局域的密度泛函方法则给出了合理的结构参数. 局域密度泛函方法计算得到的Au—Au键和 Au—X键振动频率也与实验数据符合较好. 还运用含时密度泛函理论计算了[Au(CH₂)₂PH₂]₂X₂的电子激发能, 对分子在紫外-可见光谱范围内的电子跃迁进行了分析, 考察了卤素配体对激发能的影响, 并结合分子轨道能级的变化对此给予了解释.     

Experimental and Theoretical Study of the n‐Doped Successive Polyanions of Oligocruciform Molecular Wires: Up to Five Units of Charge

The electronic structure of polyanions of sterically encumbered triisopropylsilyl‐substituted linear and cyclic oligo(phenyleneethynylene)s ( M onomer, T rimer, P entamer, and Tr iangle) is investigated by electron paramagnetic resonance (EPR), electron nuclear double resonance (ENDOR), and UV/Vis–near‐infrared (NIR) spectroscopies, cyclic voltammetry, and theoretical calculations (DFT). Increasing anion orders are generated sequentially in vacuo at room temperature by chemical reaction with potassium metal up to the pentaanion. The relevance of these compounds acting as electron reservoirs is thus demonstrated. Even‐order anions are EPR silent, whereas the odd species exhibit different signatures, which are identified after comparison of the measured hyperfine couplings by ENDOR spectroscopy with those predicted by DFT calculations. With increasing size of the oligomers the electron spin density is first distributed over the backbone carbon atoms for the monoanions, and then further localized at the outer phenyl rings for the trianion species. Examination of the UV/Vis‐NIR spectra indicates that the monoanions ( T^.? , P^.? ) exhibit two transitions in the Vis‐NIR region, whereas a strong absorption in the IR region is solely observed for higher reduced states. Electronic transitions of the neutral monoanions and trianions are redshifted with increasing oligomer size, whereas for a given oligomer a blueshift is observed upon increasing the charge, which suggests a localization of the spin density.     

Gas‐Phase Interactions between Lead(II) Ions and Cytosine: Tandem Mass Spectrometry and Infrared Multiple‐Photon Dissociation Spectroscopy Study

Gas‐phase interactions between Pb²⁺ ions and cytosine (C) were studied by combining tandem mass spectrometry, infrared multiple photon dissociation spectroscopy, and density functional theory (DFT) calculations. Both singly and doubly charged complexes were generated by electrospray. The [Pb(C)?H]⁺ complex was extensively studied, and this study shows that two structures, involving the interaction of the metal with the deprotonated canonical keto‐amino tautomer of cytosine, are generated in the gas phase; the prominent structure is the bidentate form involving both the N1 and O2 electronegative centers. The DFT study also points out a significant charge transfer from the nucleobase to the low‐lying p orbitals of the metal and a strong polarization of the base upon complexation. The various potential energy surfaces explored to account for the fragmentation observed are consistent with the high abundance of the [PbNH₂]⁺ fragment ion.     

Exciton Migration in Conjugated Dendrimers: A Joint Experimental and Theoretical Study

We report a joint experimental and theoretical investigation of exciton diffusion in phenyl‐cored thiophene dendrimers. Experimental exciton diffusion lengths of the dendrimers vary between 8 and 17 nm, increasing with the size of the dendrimer. A theoretical methodology is developed to estimate exciton diffusion lengths for conjugated small molecules in a simulated amorphous film. The theoretical approach exploits Fermi’s Golden Rule to estimate the energy transfer rates for a large ensemble of bimolecular complexes in random relative orientations. Utilization of Poisson’s equation in the evaluation of the Coulomb integral leads to very efficient calculation of excitonic couplings between the donor and the acceptor chromophores. Electronic coupling calculations with delocalized transition densities revealed efficient coupling pathways in the bulk of the material, but do not result in strong couplings between the chromophores which are calculated for more localized transition densities. The molecular structures of dendrimers seem to be playing a significant role in the magnitude of electronic coupling between chromophores. Simulated diffusion lengths correlate well with the experimental data. The chemical structure of the chromophore, the shape of the transition densities and the exciton lifetime are found to be the most important factors in determining the size of the exciton diffusion length in amorphous films of conjugated materials.     

Unraveling gold(I)-specific action towards peptidic disulfide cleavage: a DFT investigation

Ground-state disulfide dissociation is a target of prime importance in structural biochemistry. A main difficulty consists in avoiding competition with carbon–sulfur and backbone scission pathways. In tandem mass spectrometry, such selectivity is afforded using transition elements or coinage-metal ions as catalyst. Yet, the underlying gas-phase mechanistic details remain poorly understood. Gold(I)-assisted disulfide cleavage is investigated by means of DFT calculations, to elucidate the highly selective and specific catalytic action of this transition-metal cation, a most promising one in tandem mass spectrometry. The preferential cleavage of sulfur–sulfur versus carbon–sulfur linkages on dimethyldisulfide, taken as a prototypical aliphatic compound, is rationalized on the basis of molecular orbital arguments. Secondly, it is revealed that the disulfide dissociation profile is dramatically impacted by a peptidic environment. Calculations on L,L-cystine derivatives show two main factors: the topological frustration for an embedded -CH(2)-S-S-CH(2)- motif induces a 5 kcal mol(-1) penalty, whereas electrophilic assistance via complexation of nitrogen and oxygen atoms lowers activation barriers by a factor of 3. S-S weakening is both thermodynamically and kinetically driven by the versatile coordination mode of gold(I). The influence of amine-terminus group protonation is finally sketched: it gives rise to an intermediate reactivity. This study sheds lights on the key action of the peptidic environment in tuning the dissociation profile in the presence of this transition-metal monocation.     

Understanding Electrogenerated Chemiluminescence Efficiency in Blue‐Shifted Iridium(III)‐Complexes: An Experimental and Theoretical Study

Compared to tris(2‐phenylpyridine)iridium(III) ([Ir(ppy)₃]), iridium(III) complexes containing difluorophenylpyridine (df‐ppy) and/or an ancillary triazolylpyridine ligand [3‐phenyl‐1,2,4‐triazol‐5‐ylpyridinato (ptp) or 1‐benzyl‐1,2,3‐triazol‐4‐ylpyridine (ptb)] exhibit considerable hypsochromic shifts (ca. 25–60 nm), due to the significant stabilising effect of these ligands on the HOMO energy, whilst having relatively little effect on the LUMO. Despite their lower photoluminescence quantum yields compared with [Ir(ppy)₃] and [Ir(df‐ppy)₃], the iridium(III) complexes containing triazolylpyridine ligands gave greater electrogenerated chemiluminescence (ECL) intensities (using tri‐n‐propylamine (TPA) as a co‐reactant), which can in part be ascribed to the more energetically favourable reactions of the oxidised complex (M⁺) with both TPA and its neutral radical oxidation product. The calculated iridium(III) complex LUMO energies were shown to be a good predictor of the corresponding M⁺ LUMO energies, and both HOMO and LUMO levels are related to ECL efficiency. The theoretical and experimental data together show that the best strategy for the design of efficient new blue‐shifted electrochemiluminophores is to aim to stabilise the HOMO, while only moderately stabilising the LUMO, thereby increasing the energy gap but ensuring favourable thermodynamics and kinetics for the ECL reaction. Of the iridium(III) complexes examined, [Ir(df‐ppy)₂(ptb)]⁺ was most attractive as a blue‐emitter for ECL detection, featuring a large hypsochromic shift (λ_max=454 and 484 nm), superior co‐reactant ECL intensity than the archetypal homoleptic green and blue emitters: [Ir(ppy)₃] and [Ir(df‐ppy)₃] (by over 16‐fold and threefold, respectively), and greater solubility in polar solvents.     

Co‐Adsorption of O2 and CO on Au2−: Infrared Photodissociation Spectroscopy and Theoretical Study of [Au2O2(CO)n]− (n=2–6)

The co‐adsorption of O₂ and CO on anionic sites of gold species is considered as a crucial step in the catalytic CO oxidation on gold catalysts. In this regard, the [Au₂O₂(CO)_n]^? (n=2–6) complexes were prepared by using a laser vaporization supersonic ion source and were studied by using infrared photodissociation spectroscopy in the gas phase. All the [Au₂O₂(CO)_n]^? (n=2–6) complexes were characterized to have a core structure involving one CO and one O₂ molecule co‐adsorbed on Au₂^? with the other CO molecules physically tagged around. The CO stretching frequency of the [Au₂O₂(CO)]^? core ion is observed around =2032–2042 cm^?1, which is about 200 cm^?1 higher than that in [Au₂(CO)₂]^?. This frequency difference and the analyses based on density functional calculations provide direct evidence for the synergy effect of the chemically adsorbed O₂ and CO. The low lying structures with carbonate group were not observed experimentally because of high formation barriers. The structures and the stability (i.e., the inertness in a sense) of the co‐adsorbed O₂ and CO on Au₂^? may have relevance to the elementary reaction steps on real gold catalysts.     

Role of Ligand in the Selective Production of Hydrogen from Formic Acid Catalysed by the Mononuclear Cationic Zinc Complexes [(L)Zn(H)]+ (L=tpy,phen, and bpy)

A series of zinc-based catalysts was evaluated for their efficiency in decomposing formic acid into molecular hydrogen and carbon dioxide in the gas phase using quadrupole ion trap mass spectrometry experiments. The effectiveness of the catalysts in the series [(L)Zn(H)]⁺, where L=2,2′:6′,2′′-terpyridine (tpy), 1,10-phenanthroline (phen) or 2,2′-bipyrydine (bpy), was found to depend on the ligand used, which turned out to be fundamental in tuning the catalytic properties of the zinc complex. Specifically, [(tpy)Zn(H)]⁺ displayed the fastest reaction with formic acid proceeding by dehydrogenation to produce the zinc formate complex [(tpy)Zn(O₂CH)]⁺ and H₂. The catalysts [(L)Zn(H)]⁺ are reformed by decarboxylating the zinc formate complexes [(L)Zn(O₂CH)]⁺ by collision-induced dissociation, which is the only reaction channel for each of the ligands used. The decarboxylation reaction was found to be reversible, since the zinc hydride complexes [(L)Zn(H)]⁺ react with carbon dioxide yielding the zinc formate complex. This reaction was again substantially faster for L=tpy than L=phen or bpy. The energetics and mechanisms of these processes were modelled using several levels of density functional theory (DFT) calculations. Experimental results are fully supported by the computational predictions.     

Infrared Spectroscopy of Fragments from Doubly Protonated Tryptic Peptides

Most proteins in proteomics are identified from tandem mass spectra of doubly protonated tryptic peptides. Statistical studies indicate that these spectra fall into two distinct classes. IR spectroscopy experiments and DFT calculations performed on model b₂ ions show that peptides producing Class I spectra form protonated oxazolone ions (see figure) and not protonated diketopiperazines as proposed elsewhere.