Slip length of water on graphene: limitations of non-equilibrium molecular dynamics simulations

Data for the flow rate of water in carbon nanopores is widely scattered, both in experiments and simulations. In this work, we aim at precisely quantifying the characteristic large slip length and flow rate of water flowing in a planar graphene nanochannel. First, we quantify the slip length using the intrinsic interfacial friction coefficient between water and graphene, which is found from equilibrium molecular dynamics (EMD) simulations. We then calculate the flow rate and the slip length from the streaming velocity profiles obtained using non-equilibrium molecular dynamics (NEMD) simulations and compare with the predictions from the EMD simulations. The slip length calculated from NEMD simulations is found to be extremely sensitive to the curvature of the velocity profile and it possesses large statistical errors. We therefore pose the question: Can a micrometer range slip length be reliably determined using velocity profiles obtained from NEMD simulations? Our answer is "not practical, if not impossible" based on the analysis given as the results. In the case of high slip systems such as water in carbon nanochannels, the EMD method results are more reliable, accurate, and computationally more efficient compared to the direct NEMD method for predicting the nanofluidic flow rate and hydrodynamic boundary condition.     

Interfacial slip friction at a fluid-solid cylindrical boundary

Recently we proposed a method to calculate the interfacial friction coefficient between fluid and solid at a planar interface. In this work we extend the method to cylindrical systems where the friction coefficient is curvature dependent. We apply the method to methane flow in carbon nanotubes, and find good agreement with non-equilibrium molecular dynamics simulations. The proposed method is robust, general, and can be used to predict the slip for cylindrical nanofluidic systems.     

Prediction of viscosity for molecular fluids at experimentally accessible shear rates using the transient time correlation function formalism

Nonequilibrium molecular dynamics (NEMD) simulations were performed and the transient time correlation function (TTCF) method applied to calculate the shear viscosity of n-decane. Using the TTCF method we were able to calculate the viscosity at shear rate orders of magnitude lower than is possible by direct NEMD simulation alone. For the first time for a molecular fluid, we were able to simulate shear rates accessible by experimental measurements, which are typically performed at shear rates well below those accessible by NEMD simulation. The TTCF method allows us to close the gap between the lowest shear rates accessible by MD simulation and the highest shear rates possible in experimental studies. Additionally a multiple time step method for Gaussian thermostatted SLLOD equations of motion was developed following earlier work [G. A. Pan et al., J. Chem. Phys. 122, 4114 (2005)] for atomic fluids.     

Transient-time correlation function applied to mixed shear and elongational flows

The transient-time correlation function (TTCF) method is used to calculate the nonlinear response of a homogeneous atomic fluid close to equilibrium. The TTCF response of the pressure tensor subjected to a time-independent planar mixed flow of shear and elongation is compared to directly averaged non-equilibrium molecular dynamics (NEMD) simulations. We discuss the consequence of noise in simulations with a small rate of deformation. The generalized viscosity for planar mixed flow is also calculated with TTCF. We find that for small rates of deformation, TTCF is far more efficient than direct averages of NEMD simulations. Therefore, TTCF can be applied to fluids with deformation rates which are much smaller than those commonly used in NEMD simulations. Ultimately, TTCF applied to molecular systems is amenable to direct comparison between NEMD simulations and experiments and so in principle can be used to study the rheology of polymer melts in industrial processes.     

Interfacial friction between semiflexible polymers and crystalline surfaces

The results obtained from molecular dynamics simulations of the friction at an interface between polymer melts and weakly attractive crystalline surfaces are reported. We consider a coarse-grained bead-spring model of linear chains with adjustable intrinsic stiffness. The structure and relaxation dynamics of polymer chains near interfaces are quantified by the radius of gyration and decay of the time autocorrelation function of the first normal mode. We found that the friction coefficient at small slip velocities exhibits a distinct maximum which appears due to shear-induced alignment of semiflexible chain segments in contact with solid walls. At large slip velocities, the friction coefficient is independent of the chain stiffness. The data for the friction coefficient and shear viscosity are used to elucidate main trends in the nonlinear shear rate dependence of the slip length. The influence of chain stiffness on the relationship between the friction coefficient and the structure factor in the first fluid layer is discussed.     

Molecular diffusion and slip boundary conditions at smooth surfaces with periodic and random nanoscale textures

The influence of periodic and random surface textures on the flow structure and effective slip length in Newtonian fluids is investigated by molecular dynamics (MD) simulations. We consider a situation where the typical pattern size is smaller than the channel height and the local boundary conditions at wetting and nonwetting regions are characterized by finite slip lengths. In the case of anisotropic patterns, transverse flow profiles are reported for flows over alternating stripes of different wettability when the shear flow direction is misaligned with respect to the stripe orientation. The angular dependence of the effective slip length obtained from MD simulations is in good agreement with hydrodynamic predictions provided that the stripe width is larger than several molecular diameters. We found that the longitudinal component of the slip velocity along the shear flow direction is proportional to the interfacial diffusion coefficient of fluid monomers in that direction at equilibrium. In case of random textures, the effective slip length and the diffusion coefficient of fluid monomers in the first layer near the heterogeneous surface depend sensitively on the total area of wetting regions.     

Equilibrium and nonequilibrium molecular dynamics simulations of the thermal conductivity of molten alkali halides

The thermal conductivity of molten NaCl and KCl was calculated through the Evans-Gillan nonequilibrium molecular dynamics (NEMD) algorithm and Green-Kubo equilibrium molecular dynamics (EMD) simulations. The EMD simulations were performed for a "binary" ionic mixture and the NEMD simulations assumed a pure system for reasons discussed in this work. The cross thermoelectric coefficient obtained from Green-Kubo EMD simulations is discussed in terms of the homogeneous thermoelectric power or Seebeck coefficient of these materials. The thermal conductivity obtained from NEMD simulations is found to be in very good agreement with that obtained through Green-Kubo EMD simulations for a binary ionic mixture. This result points to a possible cancellation between the neglected "partial enthalpy" contribution to the heat flux associated with the interdiffusion of one species through the other and that part of the thermal conductivity related to the coupled fluxes of charge and heat in "binary" ionic mixtures.     

Shear viscosity of molten alkali halides from equilibrium and nonequilibrium molecular-dynamics simulations

The shear viscosity of molten NaCl and KCl was calculated through equilibrium (EMD) and nonequilibrium molecular-dynamics (NEMD) simulations in the canonical (N,V,T) ensemble. Two rigid-ion potentials were investigated, namely, the Born-Mayer-Huggins-Tosi-Fumi potential and the Michielsen-Woerlee-Graaf-Ketelaar potential with the parameters proposed by Ladd. The NEMD simulations were performed using the SLLOD equations of motion [D. J. Evans and G. P. Morriss, Phys. Rev. A 30, 1528 (1984)] with a Gaussian isokinetic thermostat and the results are compared with those obtained from Green-Kubo EMD (N,V,T) simulations and experimental shear viscosity data. The NEMD zero strain rate shear viscosity, eta(0), was obtained by fitting a simplified Carreau-type equation and by application of mode-coupling theory, i.e., a eta-gamma(1/2) linear relationship. The values obtained from the first method are found to be significantly lower than those predicted by the second. The agreement between the EMD and NEMD results with experimental data is satisfactory for the two potentials investigated. The ion-ion radial distribution functions obtained with the two rigid-ion potentials for both molten salts are discussed in terms of the differences between the two models.     

Shear viscosity of liquid copper at experimentally accessible shear rates: application of the transient-time correlation function formalism

We report on nonequilibrium molecular dynamics (NEMD) simulations results on the shear viscosity of liquid copper, modeled by a many-body embedded-atoms model potential. Because conventional NEMD methods are restricted to very high shear rates (at least of the order of 10(10) s(-1), that is several orders of magnitude larger than those accessible by experiment), previous work only provided access to the response of the fluid in the shear-thinning regime. Using the transient-time correlation function formalism, we show how NEMD simulations can be extended to study the rheological properties of liquid copper subjected to low, experimentally accessible, shear rates. Our results provide a full picture of the rheology of the system, in the Newtonian regime as well as in the shear-thinning regime.     

Investigation of entrance and exit effects on liquid transport through a cylindrical nanopore

The entrance and exit effects on liquid transport through a nano-sized cylindrical pore under different solid wall-liquid interactions were studied by comparing molecular dynamics (MD) results of a finite length nanopore in a membrane with those of an infinite length one. The liquid transport through a finite length nanopore in a membrane was carried out by using a pressure-driven non-equilibrium molecular dynamics (NEMD) method proposed by Huang et al. [C. Huang, K. Nandakumar, P. Choi and L. W. Kostiuk, J. Chem. Phys., 2006, 124, 234701]. The fluid motion through an infinite length nanopore, which had the same cross-stream dimension as the finite length channel in the membrane, but with periodic boundary conditions in the stream-wise direction, was carried out by using the external-field driven NEMD approach [J. Koplik, J. R. Bavanar and J. F. Willemsen, Phys. Rev. Lett., 1988, 60, 1282]. The NEMD results show that the pressure and density distributions averaged over the channel in the radial direction in both finite and infinite length channels are similar, but the radial distributions of the stream-wise velocity were significantly different when the solid wall was repulsive. The entrance and exit effects lead to a decrease in flow rate at about 39% for the repulsive wall and 6% for the neutral-like wall.     

Equilibrium calculations of viscosity and thermal conductivity across a solid-liquid interface using boundary fluctuations

We calculate viscosity and thermal conductivity in systems of Lennard-Jones particles consisting of coexisting solid and liquid with different interface wetting properties using the recently developed equilibrium boundary fluctuation theory. We compare the slip length and equivalent liquid length obtained from these calculations with those obtained from nonequilibrium molecular dynamics. The equilibrium and nonequilibrium calculations of the slip length and the sum of the thermal equivalent lengths are in good agreement. We conclude that for both interfacial properties, the nonequilibrium simulations were probing the linear response. The significant dependence of the intrinsic equivalence length on the interfacial temperature difference used to generate the thermal gradient is explained as a consequence of the different thermodynamic states of the two interfaces.     

Slippage of Newtonian liquids: influence on the dynamics of dewetting thin films

Slippage of Newtonian liquids in the presence of a solid substrate is a newly found phenomenon, the origin of which is still under debate. In this article, we present a new analysis method to extract the slip length. Enhancing the slip of liquids is an important issue for microfluidic devices that demand for high throughput at low pumping power. We study the velocity of short-chained liquid polystyrene (PS) films dewetting from nonwettable solid substrates. We show how the dynamics of dewetting is influenced by slippage, and we compare the results of two types of substrates that give rise to different slip lengths. As substrates, Si wafers that have been coated with octadecyltrichlorosilane (OTS) or dodecyltrichlorosilane (DTS) were used. Our results demonstrate that the dewetting velocity for PS films on DTS is significantly larger than on OTS and that this difference originates from the different slip lengths of the liquid on top of the two surfaces. For PS films of thickness between 130 and 230 nm, we find slip lengths between 400 nm and 6 microm, depending on substrate and temperature.     

Structure and rheological behavior of highly charged colloidal particles in a cylindrical pore I. Effect of pore size

In this work we performed nonequilibrium Brownian dynamics (NEBD) computer simulations of highly charged colloidal particles in diluted suspension under a parabolic flow in cylindrical pores. The influence of charged and neutral cylindrical pores on the structure and rheology of suspensions is analyzed. A shear-induced disorder-order-disorder-like transition was monitored for low shear rates and small pore diameters. We calculate the concentration profiles, axial distribution functions, and axial-angular pair correlation functions to determine the structural properties at steady state for a constant shear flow for different pore sizes and flow strengths. Similar behavior has been observed in a planar narrow channel in the case of charged interacting colloidal particles (M.A. Valdez, O. Manero, J. Colloid Interface Sci. 190 (1997) 81). The mobility of the particles in the radial direction decreases rapidly with the flow and becomes practically frozen. The flow exhibits non-Newtonian shear thinning behavior due to interparticle interactions and particle-wall interaction; the apparent viscosity is lower as the pore diameter decreases, giving rise to an apparent slip in the colloidal suspension. The calculated slip velocity was higher than that obtained in a rectangular slit under shear flow.     

Transient molecular dynamics simulations of viscosity for simple fluids

A transient molecular dynamics (TMD) method has been developed for simulation of fluid viscosity. In this method a sinusoidal velocity profile is instantaneously overlaid onto equilibrated molecular velocities, and the subsequent decay of that velocity profile is observed. The viscosity is obtained by matching in a least-squares sense the analytical solution of the corresponding momentum transport boundary-value problem to the simulated decay of the initial velocity profile. The method was benchmarked by comparing results obtained from the TMD method for a Lennard-Jones fluid with those previously obtained using equilibrium molecular dynamics (EMD) simulations. Two different constitutive models were used in the macroscopic equations to relate the shear rate to the stress. Results using a Newtonian fluid model agree with EMD results at moderate densities but exhibit an increasingly positive error with increasing density at high densities. With the initial velocity profiles used in this study, simulated transient velocities displayed clear viscoelastic behavior at dimensionless densities above 0.7. However, the use of a linear viscoelastic model reproduces the simulated transient velocity behavior well and removes the high-density bias observed in the results obtained under the assumption of Newtonian behavior. The viscosity values obtained using the viscoelastic model are in excellent agreement with the EMD results over virtually the entire fluid domain. For simplicity, the Newtonian fluid model can be used at lower densities and the viscoelastic model at higher densities; the two models give equivalent results at intermediate densities.     

Effect of wall roughness on fluid transport resistance in nanopores

Using non-equilibrium molecular dynamics simulations, we investigate the effect of wall roughness on the transport resistance of water molecules inside modified carbon nanotubes. The effective shear stress, which characterizes the strong interaction between liquid molecules and solid wall, is a quantity that dominates the nanofluidic transport resistance. Both the effective shear stress and nominal viscosity arise with the increase of the amplitude or the decrease of the wavelength of roughness. The effect of roughness is also relatively more prominent in smaller nanotubes. The molecular mechanism is elucidated through the study of the radial density profile, hydrogen bonding, and velocity field of the confined water molecules.     

General continuum boundary conditions for miscible binary fluids from molecular dynamics simulations

Molecular dynamics simulations are used to explore the flow behavior and diffusion of miscible fluids near solid surfaces. The solid produces deviations from bulk fluid behavior that decay over a distance of the order of the fluid correlation length. Atomistic results are mapped onto two types of continuum model: Mesoscopic models that follow this decay and conventional sharp interface boundary conditions for the stress and velocity. The atomistic results, and mesoscopic models derived from them, are consistent with the conventional Marangoni stress boundary condition. However, there are deviations from the conventional Navier boundary condition that states that the slip velocity between wall and fluid is proportional to the strain rate. A general slip boundary condition is derived from the mesoscopic model that contains additional terms associated with the Marangoni stress and diffusion, and is shown to describe the atomistic simulations. The additional terms lead to strong flows when there is a concentration gradient. The potential for using this effect to make a nanomotor or pump is evaluated.     

Effect of surface roughness on rate-dependent slip in simple fluids

Molecular dynamics simulations are used to investigate the influence of molecular-scale surface roughness on the slip behavior in thin liquid films. The slip length increases almost linearly with the shear rate for atomically smooth rigid walls and incommensurate structures of the liquid/solid interface. The thermal fluctuations of the wall atoms lead to an effective surface roughness, which makes the slip length weakly dependent on the shear rate. With increasing the elastic stiffness of the wall, the surface roughness smoothes out and the strong rate dependence is restored again. Both periodically and randomly corrugated rigid surfaces reduce the slip length and its shear rate dependence.     

A random walk through the dynamics of homogeneous vapor-liquid nucleation

A method of calculating rates of homogeneous vapor-liquid nucleation based on Langevin dynamics of a few relevant degrees of freedom on a free-energy surface is proposed. The surface is obtained here from simulation and from a semi empirical expression. The mass and friction coefficients are derived from atomistic umbrella-sampling molecular-dynamics simulations. The calculated nucleation rate agrees with atomistic simulations for one particular state point of the Lennard-Jones fluid. The present method is about four orders of magnitude more computationally efficient than the direct atomistic simulation of the transmission coefficient.