Zn<Superscript>2+</Superscript> cation triggers self-assembly of cyclen into a stable metallogel

A novel type of ligands contained 1,4,7,10-tetrazacyclododecane and functionalized by two azobenzene moieties grafted with two alkyl chains was designed and synthesized. The ligands with long alkyl chains can form metallogels in the presence of Zn²⁺ cations. The formation of metallogel was followed by NMR and electronic spectral detection. The morphology of the xerogels is varied with the equivalent of Zn²⁺ cations and the concentration of the gel. Spectral and structural analysis indicated that the driving forces of the gel formation were attributed to intermolecular hydrophobic interactions between alkyl chains and π-π interaction between azobenzenes.     

Triple hydrogen bonds direct crystal engineering of metal-assembled complexes: the effect of a novel organic-inorganic module on supramolecular structure

Novel triply hydrogen bonded suprastructures based on [M(tdpd)2(L)2]2- (H2tdpd=1,4,5,6-tetrahydro-5,6-dioxo-2,3-pyrazinedicarbonitrile, L=solvent) and melamine-analogous cations have been synthesized and characterized. The use of anions containing two AAA sets from [M(tdpd)2(L)2]2- together with cations containing one DDD set (A=hydrogen-bond acceptor, D=hydrogen-bond donor) leads to the formation of complementary triply hydrogen bonded modules in the solid state. In all cases, the building module is further extended via additional hydrogen-bonding interactions to produce a tape, and tapes are assembled into sheets. These results show that a hydrogen-bonded module consisting of different kinds of building blocks, one of which is a metal complex that includes hydrogen-bond acceptor sites and the other is a hydrogen-bond donor molecule, will be attractive for constructing metal-containing supramolecular systems by the self-assembly technique.     

Influence of single versus double hydrogen-bonding motif on the crystallization and morphology of self-assembling carbamates with alkyl side chains: model system for polyurethanes

The difference in the morphology and crystallization aspects of hydrogen-bond-mediated self-assembling systems with single and double hydrogen-bonding motifs is studied here with carbamates as an example. These carbamates have alkyl side chains of various lengths, from C(4) to C(18). The biscarbamates with double hydrogen-bonding sites and symmetric substitution of alkyl segments show a significantly different morphological behavior as compared to the N-octadecyl carbamate alkyl esters (ref 5, referred to as simple carbamates henceforth) with a single hydrogen-bond motif and asymmetric substitution of alkyl side chains. In contrast to the simple carbamates in which no significant difference was found in the spherulite size from C(4) to C(12), with the biscarbamates we find that the spherulitic size, rate of growth of spherulites, and rate of crystallization show a maximum with an alkyl chain length of C(8). This is rationalized in terms of the relative contributions of the hydrogen-bond and van der Waals interaction energies. Oriented X-ray diffraction patterns from the fibrils of the spherulites lead to a model for the growth patterns of the hydrogen-bond planes and the molecular orientation in the spherulites.     

Effects of conformational flexibility of alkyl chains of cations on diffusion of ions in ionic liquids

Molecular dynamics simulations of ionic liquids [1-alkyl-3-methylimidazolium (alkyl = ethyl, butyl and hexyl), N-butylpyridinium, N-butyl-N,N,N-trimethylammonium and N-butyl-N-methylpyrrolidinium cations combined with the (CF(3)SO(2))(2)N(-) (TFSA) anion] show that the conformational flexibility of the alkyl chains in the cations is one of the important factors determining the diffusion of ions. Artificial constraint imposed on the internal rotation of alkyl chains significantly decreases the self-diffusion coefficients of cations and anions. The internal rotation of the C-N bond connecting the alkyl chain and the aromatic ring has large effects on the diffusion of ions in imidazolium and pyridinium based ionic liquids. The calculated self-diffusion coefficients of cations and anions decrease 20-40% by imposing the torsional constraint of the C-N bond. On the other hand the torsional constraint of the C-N bond does not largely change the diffusion of ions in the quaternary alkyl ammonium based ionic liquids. The conformational flexibility of the terminal C-C-C-C bond of the alkyl chains has large effects on the diffusion of ions in the quaternary alkyl ammonium based ionic liquids. The influence of the electrostatic interactions and the high density of ionic liquids on the diffusion of ions were studied. The electrostatic interactions have the paramount importance on the slow diffusion of ions in ionic liquids, while the high density of ionic liquids is also responsible for the slow diffusion. The electrostatic interactions and the high density of ionic liquids enhance the effects of the torsional constraint on the diffusion of ions, which suggests that the charge-ordering structure and small free volume originated in the strong electrostatic interactions are the causes of the significant effects of the conformational flexibility on the diffusion of ions in ionic liquids.     

Novel self-assembled chain of water molecules in a metal-organic framework structure of Co(II) with tartrate acid

1-D water chains constructed by dimer water clusters and edge-sharing cyclic pentamer have been observed in the compound [Co(C4H4O6)(2,2'-bipy) x 5H2O] (1), in which the water chains join the 1-D coordination polymeric chains to a 3-D network through hydrogen-bond interactions.     

Molecular dynamics simulations of ionic liquid-vapour interfaces: effect of cation symmetry on structure at the interface

The influence of alkyl chain symmetry of the imidazolium cation on the structure and properties of the ionic liquid-vapour interface has been addressed through molecular dynamics simulations. The anion chosen is bis(trifluoromethylsulfonyl)imide (NTf(2)). Profiles of number densities, orientation of cations, charge density, electrostatic potential, and surface tension have been obtained. At the interface, both cations and anions were present, and the alkyl chains of the former preferred to orient out into the vapour phase. A large fraction of cations preferred to be oriented with their ring-normal parallel to the surface and alkyl chains perpendicular to it. These orientational preferences are reduced in ionic liquids with symmetric cations. Although the charge densities at the interface were largely negative, an additional small positive charge density has been observed for systems with longer alkyl chains. The electrostatic potential difference developed between the liquid and the vapour phases were positive and decreased with increasing length of the alkyl group. The calculated surface tension of the liquids also decreased with increasing alkyl chain length, in agreement with experiment. The surface tension of an ionic liquid with symmetric cation was marginally higher than that of one with an asymmetric, isomeric cation.     

Reversible chain transfer between organoyttrium cations and aluminum: synthesis of aluminum-terminated polyethylene with extremely narrow molecular-weight distribution

Aminopyridinato-ligand-stabilized organoyttrium cations are accessible in very good yield through alkane elimination from trialkyl yttrium complexes with sterically demanding aminopyridines, followed by abstraction of one of the two alkyl functions using ammonium borates. At 80 degrees C and in the presence of small amounts of aluminum alkyl compounds, very high ethylene polymerization activities are observed if very bulky aminopyridinato ligands are used. During these polymerizations a reversible polyethylene chain transfer is observed between the organoyttrium cations and aluminum alkyls. The chain-transfer catalyst system described here is able to produce relatively long-chain (up to 4000 g mol-1) Al-terminated polyethylene with a molecular-weight distribution<1.1. In the synthesis of higher molecular PE a slight increase in polydispersity with increasing chain length (15,600 g mol-1, approximately 1.4) is observed owing to reduced reversibility caused by higher viscosity and precipitation of polymer chains (temperature of 80-100 degrees C).     

Synthesis, structure, and magnetic properties of (A)[FeIII(oxalate)Cl2] (A = alkyl ammonium cations) with anionic 1D [FeIII(oxalate)Cl2]- chains

The use of alkyl ammonium cations resulted in four compounds of (A)[FeIII(ox)Cl2] (A = Et3NH+ (1a, 1b), Me4N+ (2), and n-Bu4N+ (3); ox = oxalate), whose structures and magnetic properties were characterized. In all cases, the metal Fe(III) ions are six-coordinated by four oxygen atoms from two bischelating oxalate ligands and the two terminal Cl- ions in the cis position. Thus they form similar anionic 1D [FeIII(ox)Cl2]- chains. The chains are separated by alkyl ammonium cations in the lattice, and the cation size seems to control the interchain separation and packing patterns in the solid. A parallel arrangement of the [FeIII(ox)Cl2]- chains is observed for 1a, 2, and 3, while a crossed one is observed for 1b, which is a polymorph of 1a. Magnetic studies reveal the antiferromagnetic intrachain interactions in all compounds. The last three compounds, 1b, 2, and 3, show spin canting below 14.5, 9.5, and 3.8 K, respectively. The dipolar interaction over the interchain distance is proposed to be the result of 3D magnetic ordering in the materials.     

Synthesis,structure and properties of a one-dimensional coordination polymer containing both dicyanamide and ethylenediamine

The nickel(II) complex [Ni(en)₂{N(CN)₂}]ClO₄ 1 (en?=?ethylenediamine) has been synthesized and its structure determined. The complex forms a one-dimensional chain structure via the bidentate bridging ligand dicyanamide. A two-dimensional network is formed via interchain hydrogen-bond interactions. The magnetic properties of the compound (5–300?K) show the existence of weak antiferromagnetic exchange interactions between paramagnetic centers along chains.     

取代烷基侧链长度对二维纳米结构的影响

合成了一系列烷基取代的间苯三酚衍生物,并在大气条件下用扫描隧道显微镜研究了它们在高定向裂解石墨表面的吸附和组装行为.实验结果表明,这些自组装分子具有条状结构特征.在链长较短的分子图像中,两条平行的烷氧基链肩并肩地排列在苯环的一侧,另一条烷氧基链则排列在苯环的另一侧,链与链之间彼此相互交错排列形成均一的烷基条带.当链长增加时,这种高稳定性和密排结构遭到破坏,出现单个分子和分子对共存的组装结构.这是由于烷基链与烷基链之间以及烷基链与基底之间的作用力共同决定的.通过调控分子烷基链的长度可以得到不同的表面二维纳米结构.     

The effect of fluorination: a crystallographic and computational study of mesogenic alkyl 4-[2-(perfluorooctyl)ethoxy]benzoates

The series of alkyl 4-[2-(perfluorooctyl)ethoxy]benzoates (F8-n) shows a systematic change of crystal structures depending on the length of the alkyl chain: separate packing of perfluorooctyl (Rf) and alkyl (Rh) chains from each other for shorter (n=2) and longer (n=11) members, alternate packing of Rf and Rh chains for middle (n=6,7) members, and an intermediate type of packing for n=4. Semiempirical MO calculations show slightly repulsive interactions between the Rf chains, and attractive ones between Rf and Rh chains and between Rh and the core of a molecular pair. It is concluded that fluorination determines the molecular shape of the crystal structures by making the chain rigid. It is confirmed that the interactions between Rf chains are small compared with those between other moieties and that they are forced to aggregate owing to the exclusion from other moieties. Thus, the effect is dependent on the geometries and intermolecular interactions of the other moieties.     

Significant Effect of the Flexibility of Bridging Alkyl Chains on the Proximity of Stacked Porphyrin and Phthalocyanine Conjugated with a Fourfold Rotaxane Linkage

Spatial distance is an important factor in controlling the functional interactions between molecular units in a conjugate; therefore, the bridging unit has been closely examined. Here, we examined the effect of the flexibility of bridging alkyl chains on the proximity of stacked porphyrin and phthalocyanine conjugated with a fourfold rotaxane linkage. We found that closely stacking two π systems requires bridging alkyl chains above a certain length, and the shorter bridges hinder stacking because of their lower flexibility. The stacking distance between porphyrin and phthalocyanine in the conjugate with decyl (C₁₀) chains was estimated to be 4.03 Å and showed a unique physical character arising from short-distance interactions. The longer alkyl chains minimized steric restriction inside the fourfold rotaxane and allowed efficient communication between the porphyrin and phthalocyanine units. This is due to the flexibility of the side chains.     

Mechanism of solvophobic interactions

A mechanism of solvophobic interactions based on the concept that the elastic spatial hydrogen-bond network forces out dissolved solvophobic species or the solvophobic moiety of molecules and causes them to aggregate was proposed. The elasticity of the spatial network was estimated based on the isothermal compressibility, compression modulus, and instantaneous shear modulus (a quantity that characterizes structural relaxation). It was concluded that the elasticity of the spatial hydrogen-bond network is the driving force of solvophobic interactions.     

Hydrogen bonding versus van der Waals interactions: competitive influence of noncovalent interactions on 2D self-assembly at the liquid-solid interface

The structures of the self-assembled monolayers of various 4-alkoxybenzoic acids physisorbed at the liquid-solid interface were established by employing scanning tunnelling microscopy (STM). This study has been essentially undertaken to explore the competitive influence of van der Waals and hydrogen-bonding interactions on the process of two-dimensional self-assembly. These acid derivatives form hydrogen-bonded dimers as expected; however, the dimers organise themselves in the form of relatively complex lamellae. The characteristic feature of these lamellae is the presence of regular discommensurations or kinks along the lamella propagation direction. The formation of kinked lamellae is discussed in light of the registry mechanism of the alkyl chains with the underlying graphite substrate. The location of the kinks along a lamella depends on the number (odd or even) of carbon atoms in the alkyl chain. This result indicates that concerted van der Waals interactions of the alkyl chain units introduce the odd/even chain-length effect on the surface-assembled supramolecular patterns. The odd/even effects are retained even upon complexation with a hydrogen-bond acceptor. However, as the solvent is changed from 1-phenyloctane to 1-octanoic acid, the kinked lamellae as well as the odd/even effects disappear. This solvent-induced convergence of supramolecular patterns is attained by means of co-crystallisation of octanoic acid molecules in the 2D crystal lattice, which is evident from high-resolution STM images. The solvent co-adsorption phenomenon is discussed in terms of competing van der Waals and hydrogen-bonding interactions.     

The Association of Picrate Ions with Amphiphilic Cations in Water and Aqueous Solutions of Nonionic Surfactant and β-Cyclodextrin

The interaction of cetyltrimethylammonium and cetylpyridinium bromides with picrate ions in water and aqueous solutions of the nonionic surfactant Brij 35 is studied by spectrophotometry. Spectral characteristics of the associates of picrate ions with long-chain nitrogen-containing cations depend on the concentration of a cationic surfactant. When β-cyclodextrin is added, these associates decompose owing to the formation of the strong inclusion complexes of the guest-host type with amphiphilic ions of a cationic surfactant or Brij 35 molecules. The conclusion is made that the driving force for the formation of premicellar aggregates involving picrate ions is the interactions between alkyl chains of surfactant cations. It is shown that, in the presence of various surfactants, as β-cyclodextrin concentration increases, first the molecules of nonionic surfactant and then amphiphilic cations bind with the receptor cavity. It is confirmed that there is no interaction between polyethylene glycol and β-cyclodextrin in aqueous solution.     

Ionic liquids based on dicyanamide anion: influence of structural variations in cationic structures on ionic conductivity

A series of dicyanamide [N(CN)2]-based ionic liquids were prepared using 1-alkyl-3-methylimidazolium cations with different alkyl chain lengths and ethyl-containing heterocyclic cations with different ring structures, and the influence of such structural variations on their thermal property, density, electrochemical window, viscosity, ionic conductivity, and solvatochromic effects was investigated. We found that the 1,3-dimethylimidazolium salt shows the highest ionic conductivity among ionic liquids free from halogenated anions (3.6 x 10(-2) S cm(-1) at 25 degrees C), and the elongation of the alkyl chain causes the pronounced depression of fluidity and ionic conductivity. Also, such an elongation gives rise to the increase in the degree of ion association in the liquids, mainly caused by the van der Waals interactions between alkyl chains. N(CN)2 salts with 1-ethyl-2-methylpyrazolium (EMP) and N-ethyl-N-methylpyrrolidinium (PY(12)) cations as well as 1-ethyl-3-methylimidazolium (EMI) cation are liquids at room temperature (RT), while the N-ethylthiazolium salt shows a melting event at higher temperature (57 degrees C). Among the three RT ionic liquids with ethyl-containing cations, RT ionic conductivity follows the order EMI > PY(12) > EMP, which does not coincide with the order of fluidity at RT (EMI > EMP > PY(12)). Such a discrepancy is originated from a high degree of ion dissociation in the PY(12) salt, which was manifested in the Walden rule deviation and solvatochromic effects. A series of N(CN)2/C(CN)3 binary mixtures of the EMI salts were also prepared. RT ionic conductivity decreases linearly with increasing the molar fraction of C(CN)3 anion.     

The Formation of Organogels and Helical Nanofibers from Simple Organic Salts

Simple organic salts based on aniline‐derived cations and D ‐tartrate anions formed organogels and helical nanofibers. The organic salt (p‐fluoroanilinium)(D ‐tartrate) was found to generate an organogel despite the absence of a hydrophobic alkyl chain, whereas (p‐iodoanilinium)(D ‐tartrate) formed helical nanofibers in braided ropelike structures through a rolling‐up process. The helicity of these nanofibers could be reversed by changing the growth solvent. The driving forces responsible for the formation of the nanofibers were determined to be 1D O?H???O^? hydrogen‐bonding interactions between D ‐tartrate anions and π stacking of anilinium cations, as well as steric hindrance between the hydrogen‐bonded chains.     

Relation between packing density and thermal transitions of alkyl chains on layered silicate and metal surfaces

Self-assembled layers of alkyl chains grafted onto the surfaces of layered silicates, metal, and oxidic nanoparticles are utilized to control interactions with external media by tuning the packing density of the chains on the surface, head group functionality, and chain length. Characterization through experiment and simulation shows that the orientation of the alkyl layers and reversible phase transitions on heating are a function of the cross-sectional area of the alkyl chains in relation to the available surface area per alkyl chain. On even surfaces, a packing density less than 0.2 leads to nearly parallel orientation of the alkyl chains on the surface, a high degree of conformational disorder, and no reversible melting transitions. A packing density between 0.2 and 0.75 leads to intermediate inclination angles, semicrystalline order, and reversible melting transitions on heating. A packing density above 0.75 results in nearly vertical alignment of the surfactants on the surface, a high degree of crystalline character, and absence of reversible melting transitions. Curved surfaces can be understood by the same principle, taking into account a local radius of curvature and a distance-dependent packing density on the surface. In good approximation, this simple model is independent from the length of the alkyl chains (a minimum length of C10 is required to form sufficiently distinctive patterns), the chemical nature of the surface, and of the surfactant head group. These structural details primarily determine the functionality of alkyl modified surfaces and the temperature of thermal transitions.     

Hydrogen bond dynamics in heavy water studied with quantum dynamical simulations

The structure and dynamics of the hydrogen-bond network in heavy water (D(2)O) is studied as a function of the temperature using quantum dynamical simulations. Our approach combines an ab initio-based representation of the water interactions with an explicit quantum treatment of the molecular motion. A direct connection between the calculated linear and nonlinear vibrational spectra and the underlying molecular dynamics is made, which provides new insights into the rearrangement of the hydrogen-bond network in heavy water. A comparison with previous calculations on liquid H(2)O suggests that tunneling does not effectively contribute to the dynamics of the water hydrogen-bond network above the melting point. However, the effects of nuclear quantization are not negligible at all temperatures and become increasingly important near the melting point, which is in agreement with recent experimental analysis of the structural properties of liquid water as well as of the proton momentum distribution in supercooled water.