The intercalation of ethidium bromide in the chromonic lyotropic phases of drugs and nucleic acids

Chromonic liquid crystalline phases are formed by a variety of drug and dye/water systems. In contrast to conventional lyotropic phases (where micelle formation underlies the mesogenic properties), in chromonic systems the molecules stack in columns. The different chromonic phases are different arrangements of these columns. We have examined the solution of ethidium bromide (EB) in the well-documented chromonic Intal/water system. EB is a widely used nucleic acid stain which changes colour when intercalated into DNA and which becomes fluorescent.

We have charted the changes in the temperature/composition phase diagram of the Intal/water system caused by adding EB. Although there are changes in the position of the phase boundaries, the overall pattern remains qualitatively the same—implying that the host phase is accepting EB as a similar chromonic molecule. The intercalation of EB molecules in the chromonic host phase results in optical effects—a metachromic colour change and fluorescence, similar to those occurring when the dye stains DNA.

These observations strengthen our belief that the central stack of bases in DNA can be regarded as being chromonic in nature.     

The chromonic phases of dyes

Abstract

It has been shown that the lyotropic liquid-crystalline phases formed by certain dyes are structurally analogous to the chromonic N and M liquid-crystalline phases previously thought to be unique to certain anti-asthmatic/anti-allergic drugs. We suspect that these two groups of compounds will prove to be representatives of a large new class of mesogenic materials.     

Oriented monolayers prepared from lyotropic chromonic liquid crystal

We use a layer-by layer electrostatic self-assembly technique to obtain in-plane oriented aggregates of mesogenic dye molecules cast from lyotropic chromonic liquid crystals (LCLCs) on mica substrates. The aqueous solutions of dye used for deposition are in the nematic phase. Atomic force microscopy and X-ray photoelectron spectroscopy of the dried film reveal that the LCLC molecules adsorb at the charged substrate preserving ordered aggregates of elongated shape characteristic of the nematic phase in the aqueous solution. These elongated aggregates of LCLC molecules form films with in-plane orientational order and are compositionally distinct from the substrate.     

The chromonic phases of dyes

It has been shown that the lyotropic liquid-crystalline phases formed by certain dyes are structurally analogous to the chromonic N and M liquid-crystalline phases previously thought to be unique to certain anti-asthmatic/anti-allergic drugs. We suspect that these two groups of compounds will prove to be representatives of a large new class of mesogenic materials.     

Planar and twisted lyotropic chromonic liquid crystal cells as optical compensators for twisted nematic displays

We have explored the use of lyotropic chromonic liquid crystals (LCLCs) as promising materials for optical compensators for liquid crystal displays. We used aqueous solutions of disodium cromoglycate in the range of concentrations that yield a chromonic N phase. The N phase is aligned by rubbed polyimide layers giving planar orientation. Two different types of LCLC-based elements are described: (a) a uniformly aligned planar N phase that forms an optically uniaxial plate with a negative birefringence; (b) twisted cells of LCLC obtained by doping the N phase with chiral amino acids. Both planar and twisted N* phase cells were used for compensation of the positive birefringence of twisted nematic (TN) displays; the TN devices were appreciably improved. We achieved achromatic dark state and contrast ratio up to 50:1 at all directions within a 40° cone of viewing angle.     

Planar and twisted lyotropic chromonic liquid crystal cells as optical compensators for twisted nematic displays

We have explored the use of lyotropic chromonic liquid crystals (LCLCs) as promising materials for optical compensators for liquid crystal displays. We used aqueous solutions of disodium cromoglycate in the range of concentrations that yield a chromonic N phase. The N phase is aligned by rubbed polyimide layers giving planar orientation. Two different types of LCLC-based elements are described: (a) a uniformly aligned planar N phase that forms an optically uniaxial plate with a negative birefringence; (b) twisted cells of LCLC obtained by doping the N phase with chiral amino acids. Both planar and twisted N* phase cells were used for compensation of the positive birefringence of twisted nematic (TN) displays; the TN devices were appreciably improved. We achieved achromatic dark state and contrast ratio up to 50:1 at all directions within a 40° cone of viewing angle.     

Development of new coarse-grained models for chromonic liquid crystals: insights from top-down approaches

ABSTRACT

Two top-down coarse-grained molecular simulation models for a chromonic liquid crystal, 3,6,7,10,11-hexa-(1,4,7-trioxa-octyl)-triphenylene, are tested. We use an extension of the well-known MARTINI model and develop a new coarse-grained model based on statistical associating fluid theory (SAFT)-γ perturbation theory. For both models, we demonstrate self-assembly in the isotropic phase of the chromonic and we test the effectiveness of both models in terms of the structures of the chromonic aggregates that are produced in solution and the thermodynamics of association. The latter is tested by calculations of the potential of mean force for dimers in solution, which measures the strength of molecular association. SAFT-γ provides valuable insights into the thermodynamics of assembly. Exploration of a range of interactions between unlike sites demonstrates that chromonic self-assembly only occurs in a small parameter space where the hydrophilic–lipophilic balance between aromatic core and ethylene oxide chains is optimal. Outside of this balance, chromonic self-assembly is replaced by the formation of conglomerates of molecules or short stacks.     

NMR and X-ray studies of the chromonic lyomesophases formed by some xanthone derivatives

Optical microscopy, NMR and X-ray measurements are presented for four chromonic lyomesogens derived from 9-xanthone. The measurements provide details about the mesogen-water binary phase diagrams of the four compounds as well as quantitative information about the ordering and structural parameters of the mesophases. All four systems exhibit peritectic phase diagrams with a nematic (N) phase at low mesogen concentration and a hexagonal (H) phase at high concentration. The results are consistent with previously suggested models for chromonic lyomesophases in which columnar aggregates are formed by stacked mesogenic molecules. In the N phase these columns are parallel to the director but are otherwise randomly distributed in the bulk solvent, while in the H phase they form a two dimensional hexagonal array.     

Structural analysis of the lyotropic polymorphism of four-stranded aggregates of 2'-deoxyguanosine 3'-monophosphate derivatives

Guanosine derivatives, dissolved in water, can form chromonic cholesteric and hexagonal phases. The common structural unit is a chiral stack of Hoogsteen-bonded guanosine tetramers. Using optical microscopy, circular dichroism and X-ray diffraction techniques, we have analysed the complex columnar polymorphism of two derivatives of 2'-deoxyguanosine—the 3'-monophosphate d(Gp) and the 3'-monophosphate monoisobutyl ester d(Gp)iBu. As a function of water concentration, both compounds exhibit four different columnar phases: in addition to the well-known cholesteric (Ch) and hexagonal (H) phaseg, a 2-dimensional square (Sq) lattice and a new hexagonal packing have been observed. In such a structure (Hb), two columns are packed in the 3m special positions of co-ordinates 1/3,2/3 and 2/3, 1/3 of the two-dimensional hexagonal unit cell. The unusual phase sequence appears to be related to the presence of strong short range intercolumnar interactions. Moreover, the easing of stacking constraints on increasing dilution seems to induce a tilting of the guanosine residues which form the tetramers.     

The distinction between chromonic and amphiphilic lyotropic mesophases

Optical microscopy, X-ray diffraction and NMR spectroscopy have been used to examine whether the hexagonal phases of representative chromonic and amphiphilic mesogens are miscible. The systems studied were octaoxyethylene-glycol dodecylether with either disodium cromoglycate or 5-n-hexyl-7-(5-methyl-sulphonimidoyl) xanthone-2-carboxylic acid. The results clearly demonstrate that the hexagonal phases of these two systems are not miscible, although miscibility does occur in the isotropic solution. These observations suggest that chromonic mesophases are a new breed of lyotropic liquid crystals.     

聚4-甲基-5-乙烯基噻唑键合硅胶柱的选择性研究

 较为系统地研究了聚4甲基5乙烯基噻唑键合硅胶固定相(PMVCAphase)与C18,C8及苯基柱在反相色谱中甲醇水体系下的选择性差别。结果表明,该固定相与常用反相色谱固定相有相似性,显示了一般反相色谱固定相填料的特性;另一方面,又由于其特殊结构,更多地显示了其在反相色谱上的特殊选择性。     

Catalysis of O-(para-nitrophenyl) O,O-dimethyl thiophosphate decomposition by chromonic mesophases based on polymerized ionic amphiphiles

The formation of a nematic chromonic mesophase in aqueous solutions of quaternized poly(ethylene imine) has been found using polythermal polarization microscopy. The reaction kinetics of O-(para-nitrophenyl) O,O-dimethyl thiophosphate hydrolysis has been studied by spectrophotometry, and a comparative analysis of the effects of lyotropic liquid crystals constructed as hexagonal and chromonic mesophases on this kinetics has been performed. It has been found that the hydrolysis of the substrate in a nematic chromonic mesophase is accelerated due to the concentration of the reactants.     

Chromonic liquid crystal formation by Edicol Sunset Yellow

The solution and liquid crystalline phases formed by dissolution of the dye Edicol Sunset Yellow (ESY) in water have been examined using optical microscopy, multinuclear NMR (1H, 2H, 13C, 23Na), and X-ray diffraction. From the solution 1H and 13C spectra (particularly 13C), it is clear that the tautomeric form present in all these phases is the hydrazone, NH, structure, not the usually given azo, OH, form. Two chromonic mesophases occur: a nematic (N) phase at approximately 30-40 wt % and a hexagonal (M) phase at approximately 40-45 wt %. X-ray diffraction data show that the aggregates in the mesophases are single molecule stacks, with a typical spacing of approximately 3.5 angstroms, as expected for these systems. The NMR quadrupole splittings (2H2O, 23Na) are similar to those observed for surfactant lyotropic mesophases, suggesting that there are no water molecules or counter ions that are tightly bound to the ESY aggregates. An unusual feature of the X-ray diffraction pattern of the mesophases is the occurrence of diffuse off-axis reflections at approximately 6.8 angstroms. It is proposed that these arise from a head-to-tail packing of the molecules within the stacks.     

Separation of erythromycin and related substances on base-deactivated reversed-phase silica gel columns

An official liquid chromatographic method for the analysis of erythromycin and related substances, which is based on a polymer reversed-phase, is described in the European Pharmacopoeia and in the United States Pharmacopeia. The pH of the mobile phase used in this system is 9.0. Recent advanced technology has led to the introduction of a new generation of silica-based reversed-phase column packings, which are claimed to be much more stable towards bases. They are useful for the analysis of basic compounds. Studies to verify the separation of erythromycin and related substances on Hypersil BDS C₁₈, Luna C₁₈(2), Inertsil ODS-2 and Supelcosil ABZ+ have been performed and the results are presented. It is shown that these base-deactivated phases give a better sensitivity and selectivity towards erythromycins than the polymer phase, provided that an adapted mobile phase is used. This is the first liquid chromatographic method described for the separation of erythromycin D from erythromycin A.     

The Intercalation Reaction of 1,10-Phenanthroline with Layered Compound FePS3

The intercalation reaction of 1,10-phenanthroline with FePS₃ in ethanol and in the presence of anilinium chloride has been monitored in detail with the X-ray powder diffraction (XRD) method to study the reaction mechanism. It is revealed that during the intercalation period there are three phases: the 001 phase (corresponding to the perpendicular orientation of the 1,10-phenanthroline ring with the layer of the host FePS₃), the 001′ phase (standing for the parallel orientation of the 1,10-phenanthroline ring with the layer), and the 001″ phase (pristine FePS₃), but as the period of the reaction is prolonged, the 001′ and 001″ phases diminish gradually and finally disappear, and the 001 phase is intensified and a complete intercalate is obtained for Series A, in which excess 1,10-phenanthroline is used. However, for Series B in which the optimum amount of 1,10-phenanthroline is used, the 001 and 001″ phases diminish gradually, and another intercalate is obtained that exhibits the 001′ phase. Moreover, if the amount of phenanthroline used in the reaction is more than that in Series B but not in excess, another intercalate containing 001 and 001′ phases is obtained. In these intercalation reactions, the results of IR spectroscopy indicate that anilinium chloride serves only as the source of protons for 1,10-phenanthroline, but 1,10-phenanthroline acts as both the complexing agent of Fe²⁺ ions removed from FePS₃, confirmed by UV spectra of the filtrates, and the inserted guest, some of which exists in the form of protonated cation to maintain the charge balance of the intercalates. From the experimental evidence we find that the arranged orientation of 1,10-phenanthroline between the layers is controlled by the amount of guest used in the reaction, and a possible intercalation mechanism is proposed for the reaction.     

Rheological and photophysical investigations of chromonic-like supramolecular mesophases formed by luminescent iridium(III) ionic complexes in water

Luminescent complexes with general formula [(C^N)₂Ir(N^N)]OCOCH₃, where C^N = 2-phenylpyridine (ppy) and N^N = 2,2?-bipyridine (bpy), self-assemble into ordered ‘soft’ viscous mesophases of chromonic type. By changing the ancillary ligand with 1,10-phenanthroline (phen), a new mesomorphic complex was obtained. The self-assembly into ordered liquid crystalline phases of chromonic type in water was investigated by comprehensive rheological and photophysical studies. By changing the ancillary ligand bpy with phen, assembly into smaller, more symetric aggregates is favoured, resulting in lower viscosity and more dynamic mesophase.     

Proton NMR relaxation study of molecular dynamics of chromonic liquid crystal Edicol Sunset Yellow

Proton nuclear magnetic resonance (¹H NMR) relaxometry, over about five decades in Larmor frequency, and pulsed field gradient NMR were used to study the molecular dynamics in the chromonic nematic and isotropic phases of stacked molecules of the binary mixture composed by Edicol Sunset Yellow (ESY) and deuterated water. Our results evidence that in both phases collective motions are responsible for the spin-lattice relaxation dispersion in the Larmor frequency range below 1 MHz. In the nematic phase, the collective motion are attributed to columnar undulations within the stacked molecules, while, in the isotropic phase, the results are explained by local order fluctuations due to the formation of the stacks. The high frequency dispersion was explained by individual molecular motions like rotations around and perpendicular to the stack axis, and also self-diffusion.     

A new class of bent‐shaped mesogens exhibiting unusual mesophase behaviour

Examples of a new class of bent‐core compounds are presented, the central fragment of which consists of a benzoyl derivative of a secondary cyclic amine. The mesophase behaviour has been studied by differential scanning calorimetry, polarizing optical microscopy, X‐ray diffraction and electro‐optical measurements. It was found that the five‐ring compounds form smectic CP or B₁ phases which are typical for bent‐core mesogens. The six‐ring compounds exhibit, in some cases, only conventional non‐polar smectic phases; in other cases non‐polar smectic phases as well as banana phases are seen. Of particular interest is the occurrence of a switchable uniaxial semectic A‐like phase with an antiferroelectric structure.     

Different types of phase transitions at charged interfaces: A thermodynamic analysis

A thermodynamic treatment of surface phase transitions due to orientational and structural effects is presented. It is shown that thermodynamics predict only two types of surface phase transitions: separation of the interface into two new phases and a kind of two-dimensional condensation. The first type takes place when both adsorbate and solvent molecules coexist at the interface. The new phases may be concentrated surface solutions of adsorbate in solvent and vice versa or pure adsorbate and a concentrated surface solution of adsorbate in solvent. In the last case, the adsorbate may be expelled in the form of a surface precipitate or micelles. The second type of surface phase transition occurs only at saturated interfaces with adsorbate molecules. Orientational and structural effects do not lead to independent transitions, as in bulk phases, but coexist in the two types of surface phase transitions. Rigorous relationships, which describe the transition region, are also developed and discussed.     

Molecular modeling of liquid crystalline self-organization of fullerodendrimers: columnar to lamellar phase transitions driven by temperature and/or concentration changes

The molecular cubic-block model [ J. Chem. Phys. 2005, 123, 164904 ] is used to study a class of poly(benzyl ether) fullerodendrimers that have recently been reported to form columnar liquid crystal phases. In agreement with experiment, the model-molecules are found to self-assemble into columns which form hexagonal or rectangular lattices. The columnar cross sections are elongated in the rectangular phase. Transitions to the isotropic phase, either directly or through the intermediate formation of smectic phases, have been found. The effects of dissolving small amounts of nonbonded fullerene molecules have been explored. The results predict that the fullerene solutes restrict the range of stability of the columnar phase and may induce transitions from the columnar to the smectic or the isotropic phase.