A photoacoustic calorimetric characterization of the reaction enthalpy and volume for the preparation of a reactive intermediate from CpMn(CO)3

Photoacoustic calorimetry (PAC) allows measurement of the energetics of reactive intermediates. Here, we report the examination of the metal carbonyl η⁵-CpMn(CO)₃ (Cp, cyclopentadiene) via time-independent PAC, in a homologous series of solvents. The measured heat releases allow one to determine simultaneously the enthalpy and volume change resulting from the photodissociation of CpMn(CO)₃. While the photoacoustic signal results from both of these processes, it has often been assumed that the volume change contribution to the observed photoacoustic signal is negligible for small molecules undergoing photodissociation. The current study tests the assumption of a negligible reaction volume by using a more complete treatment. The reaction of an equimolar number of photons and CpMn(CO)₃ molecules, the subsequent photodissociation of the Mn–CO bond, and the ligation of a solvent molecule in an alkane solvent yields ΔH_obs = 32.7 ± 0.7 kcal/mol and ΔV_chem = 11.0 ± 1.3 mL/mol, both of which are independent of the quantum yield of photodissociation. A detailed analysis of the quantum yield is included (using both previously reported measurements, and new data from this work), from which we determine Φ_diss = 0.635. This quantum yield allows us to determine ΔH_rxn = 51.6 kcal/mol and ΔV_rxn = 17.3 mL/mol. These results demonstrate that if the contribution of the reaction volume change to the photoacoustic signal is ignored, the reaction enthalpy derived would underestimate the true value by 7%. We also estimate the BDE{Cp(CO)₂Mn–CO} to be 59.4 kcal/mol.     

Time-resolved photoacoustics study of the ruthenium(II) bis(2,2'-bipyridine)(4,4'-dicarboxy-2,2'-bipyridine) complex

The formation and the decay of the triplet metal to ligand charge transfer state ((3)MLCT) of ruthenium(II) bis(2,2'-bipyridine)(4,4'-dicarboxy-2,2'-bipyridine) (Ru(bpy)(2)(dcbpy)) were characterized using photoacoustic calorimetry. At pH 6 and 2, the (3)MLCT state formation leads to a volume change of -8 mL mol(-1) and enthalpy changes of 17 kcal mol(-1) and 13 kcal mol(-1), respectively. We attribute the volume contraction to structural changes and to solvent electrostriction. At pH 4, the photoexcitation of the complex leads to an expansion of 14 mL mol(-1) and an enthalpy change of approximately 119 kcal mol(-1) due to protonation of the carboxyl group in the excited state.     

Preparative and structural studies on iron(II)-thiolate cyanocarbonyls: relevance to the [NiFe]/[Fe]-hydrogenases

A number of thermally stable iron(II)-thiolate cyanocarbonyl complexes, cis,cis-[Fe(CN)2(CO)2(CS3-S,S)]2-(1), mer-[Fe(CO)2(CN)3(NCCH3)]-(2)mer-[Fe(CO)3(CN)(CS3-S,S)]-(3), cis-[Fe(CO)2(CN)(S(CH2)2S(CH2)2S-S,S,S)]-(4), [Fe(CO)2(CN)3Br]2-(5), mer-[Fe(CO)2(CN)3(m-SC6H4Br)]2-(6) and mer-[Fe(CO)2(CN)3(SPh)]2-(7) were isolated and characterized by IR and X-ray diffraction analysis. The extrusion of one strong sigma-donor CN- ligand instead of CO from the iron(II) center of the thermally stable complexes [FeII(CO)2(CN)3Br]2-(5) containing less electron-donating bromide reflects the electron-rich character of the mononuclear [FeII(CN)2(CO)2(CS3-S,S)]2-(1) when ligated by by the bidentate thiolate, and the combination of one cyanide, two carbonyls and a tridentate thiolate provides the stable complex 4 as a result of the reaction of complex 5 and chelating ligand [S(CH2)2S(CH2)2S]2-. The preference of the sixth ligand coordinated to the unsaturated [FeII(CO)(CN)2(CS3-S,S)]2- Fe(II) center, the iron-site architecture of the bimetallic Ni-Fe active-site of [NiFe] hydrogenases, is a strong pi-acceptor CO group. Scrutiny of the coordination chemistry of iron(II)-thiolate cyanocarbonyl species [FeII(CO)x(CN)y(SR)z]n- reveals that certain combinations of thiolate, cyanide and carbonyl ligands (3 < or = y+z > or = 4) bound to Fe(II) are stable and this could point the way to understand the reasons for Nature's choice of combinations of these ligands in hydrogenases.     

Iron(III) complex of a crown ether-porphyrin conjugate and reversible binding of superoxide to its Iron(II) form

The synthesis and characterization of the Fe(III) complex of a novel crown ether-porphyrin conjugate, 52-N-(4-aza-18-crown-6)methyl-54,104,154,204-tetra-tert-butyl-56-methyl-5,10,15,20-tetraphenylporphyrin (H2Porph), as well as the corresponding hydroxo, dimeric, Fe(II), and peroxo species are reported. The crystal structure of [FeIII(Porph)Cl].H3O+.FeCl4-.C6H6.EtOH is also reported. [FeIII(Porph)(DMSO)2]+ and K[FeIII(Porph)(O22-)] are high-spin species (M?ssbauer data: delta = 0.38 mm s(-1), DeltaEq = 0.83 mm s(-1) and delta = 0.41 mm s(-1), DeltaEq = 0.51 mm s(-1), respectively), whereas in a solution of reduced [FeIII(Porph)(DMSO)2]+ complex the low-spin [FeII(Porph)(DMSO)2] (delta = 0.44 mm s(-1), DeltaEq = 1.32 mm s(-1)) and high-spin [FeII(Porph)(DMSO)] (delta = 1.27 mm s(-1), DeltaEq = 3.13 mm s(-1)) iron(II) species are observed. The reaction of [FeIII(Porph)(DMSO)2]+ with KO2 in DMSO has been investigated. The first reaction step, involving reduction to [FeII(Porph)(DMSO)2], was not investigated in detail because of parallel formation of an Fe(III)-hydroxo species. The kinetics and thermodynamics of the second reaction step, reversible binding of superoxide to the Fe(II) complex and formation of an Fe(III)-peroxo species, were studied in detail (by stopped-flow time-resolved UV/vis measurements in DMSO at 25 degrees C), resulting in kon = 36 500 +/- 500 M(-1) s(-1), koff = 0.21 +/- 0.01 s(-1) (direct measurements using an acid as a superoxide scavenger), and KO2- = (1.7 +/- 0.2) x 10(5) (superoxide binding constant kinetically obtained as kon/koff), (1.4 +/- 0.1) x 10(5), and (9.0 +/- 0.1) x 10(4) M(-1) (thermodynamically obtained in the absence and in the presence of 0.1 M NBu4PF6, respectively). Temperature-dependent kinetic measurements for kon (-40 to 25 degrees C in 3:7 DMSO/CH3CN mixture) yielded the activation parameters DeltaH = 61.2 +/- 0.9 kJ mol(-1) and DeltaS = +48 +/- 3 J K(-1) mol(-1). The observed reversible binding of superoxide to the metal center and the obtained kinetic and thermodynamic parameters are unique. The finding that fine-tuning of the proton concentration can cause the Fe(III)-peroxo species to release O2- and form an Fe(II) species is of biological interest, since this process might occur under very specific physiological conditions.     

Modeling [Fe-Fe] hydrogenase: evidence for bridging carbonyl and distal iron coordination vacancy in an electrocatalytically competent proton reduction by an iron thiolate assembly that operates through Fe(0)-Fe(II) levels

IR spectroelectrochemistry of Fe4{Me(CH2S)3}2(CO)8 (4Fe6S) in the nu(CO) region shows that the neutral and anion forms have all their CO groups terminally bound to the Fe atoms; however, for the dianion there is a switch of the coordination mode of at least one of the CO groups. The available structural and nu(CO) spectra are closely reproduced by density-functional theory calculations. The calculated structure of 4Fe6S2- closely mirrors that of the diiron subsite of the [Fe-Fe] hydrogenase H cluster with a bridging CO group and an open coordination site on the outer Fe atom of pairs of dithiolate-bridged Fe0FeII subunits connected by two bridging thiolates. Geometry optimization based on the all-terminal CO isomer of 4Fe6S2- does not give a stable structure but reveals a second-order saddle point ca. 11.53 kcal mol(-1) higher in energy than the CO-bridged form. Spectroelectrochemical studies of electrocatalytic proton reduction by 4Fe6S show that slow turnover from the primary reduction process (E1/2'=-0.71 V vs Ag/AgCl) involves rate-limiting protonation of 4Fe6S- followed by reduction to H:4Fe6S-. Rapid electrocatalytic proton reduction is obtained at potentials sufficient to access 4Fe6S2-, where the rate of dihydrogen elimination from the FeIIFeII core of 4Fe6S is ca. 500 times faster than that from the FeIFeI core of Fe2(mu-S(CH2)3S)(CO)6. The dramatically increased rate of electrocatalysis obtained from 4Fe6S over all previously identified model compounds appears to be related to the features uniquely common between it and the H-cluster, namely, that turnover involves the same formal redox states of the diiron unit (FeIFeII and Fe0FeII), the presence of an open site on the outer Fe atom of the Fe0FeII unit, and the thiolate-bridge to a second one-electron redox unit.     

Rebinding kinetics of dissociated amino acid ligand and carbon monoxide to ferrous microperoxidase-11 in aqueous solution

The rebinding kinetics of an amino acid ligand to ferrous microperoxidase-11 (MP11) after photolysis of aggregated ferrous MP11 was measured in aqueous solution with femtosecond transient visible absorption spectroscopy. The kinetics of CO rebinding to ferrous MP11 after photolysis of MP11CO was also measured in aqueous solution with femtosecond transient visible absorption spectroscopy. From these measurements, we found that either Val-11 or Lys-13 rebinds to ferrous MP11 exponentially with an 8 picosecond time constant in aggregated ferrous MP11 solution and that CO rebinds to ferrous MP11 nonexponentially with subnanosecond time scale in MP11CO solution. The kinetics of both the amino acid and CO rebinding to ferrous MP11 in MP11 system mimics that in carbon monoxide oxidation activator protein (CooA) or carboxymethyl cytochrome c (CmCytC) system. We also measured the kinetics of CO rebinding to ferrous MP11 in aqueous solution at different MP11CO concentrations and found that MP11CO concentration has an obvious effect on the kinetics of CO rebinding to ferrous MP11, where both the germinate yield and rate of CO rebinding to ferrous MP11 increase with the increase of MP11CO concentration. These findings suggested that the picosecond amino acid ligand rebinding process could disturb the proximal heme-ligand structure that possibly leads to the subnanosecond CO rebinding kinetics in MP11CO, CooACO and CmCytCCO systems.     

BN-analogues of vinylidene transition metal complexes: the borylnitrene isomer

Density functional computations using the BP86 functional within the resolution-of-identity approximation and polarized triple-zeta basis sets are employed for the study of the three isoelectronic (CO)(4)FeL (L = CCH(2) (5), BNH(2) (6), NBH(2) (7)) as well as (CO)(4)Fe(NBcat) (9) (cat = catecholato) complexes. In all complexes 5-7, the ligand L prefers the equatorial position of a pseudo trigonal bipyramid. The borylnitrene complex 7 has a linear Fe-N-B arrangement; its Fe-L bond dissociation energy is similar to that of the vinylidene complex 5 and only slightly lower than that of 6. Nonetheless, 7 is less stable thermodynamically than 6 by 40 kcal mol(-1). Complexes of type 7 are expected to be reactive on the basis of the following findings: the HOMO-LUMO energy gap is small, the rearrangement from 7 to 6 via an iminoborane intermediate involves barriers of 15 and 28 kcal mol(-1), and the dissociation of a CO molecule to give (CO)(3)FeNBH(2) is only slightly endergonic (+7 kcal mol(-1) at 298.15 K). The catecholate bridge in 9 results in significant changes: the bipyramidal complex is no longer a minimum, but an isocycanato complex is obtained instead computationally.     

Reaction route control by microperoxidase-9/CTAB micelle ratios

Microperoxidases (MP) as water-soluble models attract interest to studying the reaction mechanism of peroxidases because these heme peptides are able to form the same enzyme intermediates during the reaction with peroxides. In this work we have demonstrated that the association of Fe(III)MP-9 and Fe(III)MP-11 with CTAB micelles (MP-9/CTAB and MP11/CTAB) provides a microenvironment with an alkaline interface and a hydrophobic core that exhibits peroxidase behavior. This microenvironment shifts positively the redox potential of microperoxidases by approximately 100 mV. tert-Butylhydroperoxide (t-BuOOH) when added to the medium, converted Fe(III)MP-9/CTAB to MP-9/CTAB Compound II, a high valence oxidized intermediate of the heme peptide. Subsequent addition of diphenylacetaldehyde (DPAA) to MP-9/CTAB Compound II regenerated the native form of the enzyme, Fe(III)MP-9/CTAB, what characterizes the occurrence of a peroxidase cycle. Fe(III)MP-9/CTAB regenerated during the peroxidase cycle reacted with residual DPAA in the medium to form Fe(II)MP-9/CTAB, which indicates that both Fe(III)MP-9/CTAB and its oxyferryl form can use aldehydes as reducing agents. According to the determined reduction potential, Fe(III)MP-9 and Fe(III)MP-9/CTAB should be able to oxidize DPAA (reduction potential -630 mV). The reaction of MP-9/CTAB with DPAA produced benzophenone as final product, detected by infrared spectroscopy and mass spectrometry. Interestingly, a significant difference was observed in the benzophenone yield according to the micelle/MP-9 molar ratio.     

Dynamics of CO formation in the photodissociation of HNCO and CH2CO at 193nm

The photodissociation of isocyanic acid (HNCO) and ketene (CH₂CO) at 193 nm was investigated using an ArF laser to dissociate the carbonyl compound and a CO laser to probe the resulting vibrationally excited CO. The dissociation of HNCO at 193 nm produces CO with an average vibrational energy of 4.6 ± 0.3 kcal/mol. The dissociation Gf CH₂CO at 193 nm produces CO with an average vibrational energy of 6.4 ± 0.8 kcal/mol. The observed CO vibrational energy distributions were found to be in close agreement with those predicted statistically assuming NH(a ¹Δ) + CO and CH₂(¹A₁) + CO were the photodissociation products.     

Computational study of the energetics of 3Fe(CO)4, 1Fe(CO)4 and 1Fe(CO)4(L), L = Xe, CH4, H2 and CO

Large basis CCSD(T) calculations are used to calculate the energetics of 3Fe(CO)4, 1Fe(CO)4 and 1Fe(CO)4(L), L = Xe, CH4, H2 and CO. . The relative energy of the excited singlet state of Fe(CO)4 with respect to the ground triplet state is not known experimentally, and various lower levels of theory predict very different results. Upon extrapolating to the infinite basis set limit, and including corrections for core-core and core-valence correlation, scalar relativity, and multi-reference character of the wavefunction, the best CCSD(T) estimate for the spin-state splitting in iron tetracarbonyl is 2 kcal mol(-1). Calculation of the dissociation energy of 1Fe(CO)4(L) into singlet fragments, taken together with known experimental behaviour of triplet Fe(CO)4, provides independent evidence for the fact that the spin-state splitting is smaller than 3 kcal mol(-1). These calculations highlight some of the challenges involved in benchmark calculations on transition metal containing systems.     

Enthalpy of the gas-phase CO2 + Mg reaction from ab initio total energies

Various highly accurate ab initio composite methods of Gaussian-n (G1, G2, G3), their variations (G2(MP2), G3(MP2), G3//B3LYP, G3(MP2)//B3LYP), and complete basis set (CBS-Q, CBS-Q//B3LYP) series of models were applied to compute reaction enthalpies of the ground-state reaction of CO2 with Mg. All model chemistries predict highly endothermic reactions, with DeltaH(298) = 63.6-69.7 kcal x mol(-1). The difference between the calculated reaction enthalpies and the experimental value, evaluated with recommended experimental standard enthalpies of formation for products and reactants, is more than 20 kcal x mol(-1) for all methods. This difference originates in the incorrect experimental enthalpy of formation of gaseous MgO given in thermochemical databases. When the theoretical formation enthalpy for MgO calculated by a particular method is used, the deviation is reduced to 1.3 kcal x mol(-1). The performance of the methodologies used to calculate the heat of this particular reaction and the enthalpy of formation of MgO are discussed.     

Thermal- and pressure-induced cooperative spin transition in the 2D and 3D coordination polymers {Fe(5-Br-pmd)z[M(CN)x]y} (M=AgI, AuI, NiII, PdII, PtII)

A new family of cyanide-based spin-crossover polymers with the general formula {Fe(5-Br-pmd)z[M(CN)x]y} [M=AgI (1), AuI (2), NiII (3), PdII (4), PtII (5); 5-Br-pmd=5-bromopyrimidine; z=1 or 2, x=2 or 4, and y=2 or 1] have been synthesized and characterized using single-crystal X-ray diffraction (XRD), X-ray powder diffraction (XRPD), magnetic susceptibility measurements, and differential scanning calorimetry (DSC). At 293 K, compound 1 presents the monoclinic space group C2/c, whereas at 120 K, it changes to the monoclinic space group P21/c. At 293 K, the crystal structure of 1 displays an uninodal three-dimensional network whose nodes, constituted of FeII, lie at the inversion center of an elongated octahedron. The equatorial bond lengths are defined by the N atoms of four [AgI(CN)2]- groups belonging to two crystallographically nonequivalent AgI atoms, Ag(1) and Ag(2). They are shorter than those of the axial positions occupied by the N atoms of the 5-Br-pmd ligands. The Fe-N average bond length of 2.1657(7) A is consistent with a high-spin (HS) state for the FeII ions. At 120 K, the crystal structure changes refer mainly to the FeII environment. There are two crystallographically independent FeII ions at this temperature, Fe(1) and Fe(2), which adopt the HS and low-spin (LS) states, respectively. The average Fe-N bond length for Fe(1) [2.174(5) A] and Fe(2) [1.955(5) A] agrees well with the reported magnetic data at this temperature. The spin transition of the FeII ions labeled as Fe(1) is found to be centered at Tc downward arrow=149 K and Tc upward arrow=167 K and accompanied by a drastic change of color from orange (HS) to red (LS). Magnetic susceptibility measurements under applied hydrostatic pressure performed on 1 have shown a linear displacement of the transition to higher temperatures while the hysteresis width remains unaltered in the interval of pressures of 105 Pa to 0.34 GPa. A further increase of the pressure induces the spin transition in the Fe(2) ions, which is completely accomplished at 1.12 GPa (T1/2=162 K). Compounds 1 and 2 are isostructural, but 2 does not exhibit spin-transition properties; the FeII centers remain in the HS state in the temperature range investigated, 5-300 K. Compounds 3-5 are not similar or isostructural with 1. A two-dimensional structure for 3-5 has been proposed on the basis of analytical data and the XRPD patterns. Compounds 3-5 undergo first-order spin transition where the critical temperatures for the cooling (Tc downward arrow) and warming (Tc upward arrow) modes are 170 and 180 K (3), 204 and 214 K (4), and 197 and 223 K (5), respectively. It is worth mentioning the color change from yellow to orange observed in 3-5 upon spin transition. The thermodynamic parameters associated with the spin transition estimated from DSC measurements are DeltaH=6 kJ mol(-1) (1), 11 kJ mol(-1) (3), 16 kJ mol(-1) (4), and 16 kJ mol(-1) (5) and DeltaS=38 J K(-1) mol(-1) (1), 62 J K(-1) mol(-1) (3), 76 J K-1 mol(-1) (4), and 81 J K(-1) mol(-1) (5).     

A DFT study of the adsorption and dissociation of CO on Fe(100): influence of surface coverage on the nature of accessible adsorption states.

In the present article, we report adsorption energies, structures, and vibrational frequencies of CO on Fe(100) for several adsorption states and at three surface coverages. We have performed a full analysis of the vibrational frequencies of CO, thus determining what structures are stable adsorption states and characterizing the transition-state structure for CO dissociation. We have calculated the activation energy of dissociation of CO at 0.25 ML (ML = monolayers) as well as at 0.5 ML; we have studied the dissociation at 0.5 ML to quantify the destabilization effect on the CO(alpha3) molecules when a neighboring CO molecule dissociates. In addition, it is shown that the number and nature of likely adsorption states is coverage dependent. Evidence is presented that shows that the CO molecule adsorbs on Fe(100) at fourfold hollow sites with the molecular axis tilted away from the surface normal by 51.0 degrees. The asorprton energy of the CO molecule is -2.54 eV and the C-O stretching frequency is 1156 cm(-1). This adsorption state corresponds to the alpha3 molecular desorption state reported in temperature programmed desorption (TPD) experiments. However, the activation energy of dissociation of CO(alpha3) molecules at 0.25 ML is only 1.11 eV (approximately 25.60 kcal mol(-1)) and the gain in energy is -1.17 eV; thus, the dissociation of CO is largely favored at low coverages. The activation energy of dissociation of CO at 0.5 ML is 1.18 eV (approximately 27.21 kcal mol(-1)), very similar to that calculated at 0.25 ML. However, the dissociation reaction at 0.5 ML is slightly endothermic, with a total change in energy of 0.10 eV Consequently, molecular adsorption is stabilized with respect to CO dissociation when the CO coverage is increased from 0.25 to 0.5 ML.     

Dynamics of structure and energy of horse carboxymyoglobin after photodissociation of carbon monoxide.

The energetics and structural volume changes after photodissociation of carboxymyoglobin are quantitatively investigated by laser-induced transient grating (TG) and photoacoustic calorimetric techniques. Various origins of the TG signal are distinguished: the phase grating signals due to temperature change, due to absorption spectrum change, and due to volume change. We found a new kinetics of approximately 700 ns (at room temperature), which was not observed by the flash photolysis technique. This kinetics should be attributed to the intermediate between the geminate pair and the fully dissociated state. The enthalpy of an intermediate species is determined to be 61 +/- 10 kJ/mol, which is smaller than the expected Fe-CO bond energy. The volume of MbCO slightly contracts (5 +/- 3 cm(3)/mol) during this process. CO is fully released from the protein by an exponential kinetics from 25 to -2 degrees C. During this escaping process, the volume expands by 14.7 +/- 2 cm(3)/mol at room temperature and 14 +/- 10 kJ/mol is released, which should represent the protein relaxation and the solvation of the CO (the enthalpy of this final state is 47 +/- 10 kJ/mol). A potential barrier between the intermediate and the fully dissociated state is DeltaH(*) = 41.3 kJ/mol and DeltaS(*) = 13.6 J mol(-1) K(-1). The TG experiment under a high wavenumber reveals that the volume expansion depends on the temperature from 25 to -2 degrees C. The volume changes and the energies of the intermediate species are discussed.     

Photodissociation dynamics of phenol

The photodissociation of phenol at 193 and 248 nm was studied using multimass ion-imaging techniques and step-scan time-resolved Fourier-transform spectroscopy. The major dissociation channels at 193 nm include cleavage of the OH bond, elimination of CO, and elimination of H(2)O. Only the former two channels are observed at 248 nm. The translational energy distribution shows that H-atom elimination occurs in both the electronically excited and ground states, but elimination of CO or H(2)O occurs in the electronic ground state. Rotationally resolved emission spectra of CO (1 相似文献   

Iron porphyrin-cyclodextrin supramolecular complex as a functional model of myoglobin in aqueous solution

The 1:1 inclusion complex of 5,10,15,20-tetrakis(4-sulfonatophenyl)porphinato iron(II) (Fe(II)TPPS) and an O-methylated beta-cyclodextrin dimer having a pyridine linker (1) binds dioxygen reversibly in aqueous solution. The O2 adduct was very stable (t(1/2) = 30.1 h) at pH 7.0 and 25 degrees C. ESI-MS and NMR spectroscopic measurements and molecular mechanics (MM) calculations indicated the inclusion of the sulfonatophenyl groups at the 5- and 15-positions of Fe(III)TPPS or Fe(II)TPPS into two cyclodextrin moieties of 1 to form a supramolecular 1:1 complex (hemoCD1 for the Fe(II)TPPS complex), whose iron center is completely covered by two cyclodextrin moieties. Equilibrium measurements and laser flash photolysis provided the affinities ( and ) and rate constants for O2 and CO binding of hemoCD1 (k(O2)(on), k(O2)(off), k(CO)(on), and k(CO)(off)). The CO affinity relative to the O2 affinity of hemoCD1 was abnormally high. Although resonance Raman spectra suggested weak back-bonding of d(pi)(Fe) --> pi(CO) and hence a weak CO-Fe bond, the CO adduct of hemoCD1 was very stable. The hydrophobic CO molecule dissociated from CO-hemoCD1 hardly breaks free from a shallow cleft in hemoCD1 surrounded by an aqueous bulk phase leading to fast rebinding of CO to hemoCD1. Isothermal titration calorimetry furnished the association constant (K(O2)), DeltaH degrees , and DeltaS degrees for O2 association to be (2.71 +/- 0.51) x 10(4) M(-1), -65.2 +/- 4.4 kJ mol(-1), and -133.9 +/- 16.1 J mol(-1) K(-1), respectively. The autoxidation of oxy-hemoCD1 was accelerated by H+ and OH-. The inorganic anions also accelerated the autoxidation of oxy-hemoCD1. The O2-Fe(II) bond is equivalent to the O2.--Fe(III) bond, which is attacked by the inorganic anions or the water molecule to produce met-hemoCD1 and a superoxide anion.     

Theoretical study of the equilibrium structure, vibrational spectrum, and thermochemistry of the peroxynitrate CF2BrCFBrOONO2

The results of a theoretical study of the molecular structure and conformational mobilities of the peroxynitrate CF(2)BrCFBrOONO(2) and its radical decomposition product CF(2)BrCFBrOO are reported in this paper. The most stable structures were calculated from ab initio G3(MP2)B3 and G4(MP2) methods and from density functional theory at the B3LYP/6-311+G(d) and B3LYP/6-311+G(3df) levels of theory. The equilibrium conformation of CF(2)BrCFBrOONO(2) indicates that the bromine atoms lie in position anti to each other and possess a COON dihedral angle of 114°. A quantum statistical analysis shows that about 40% of the internal rotors can freely rotate at room temperature. Our best values for the standard enthalpies of formation of CF(2)BrCFBrOONO(2) and CF(2)BrCFBrOO at 298 K obtained from isodesmic reactions at the G3(MP2)//B3LYP/6-311+G(3df) level of theory are -144.7 and -127.0 kcal mol(-1). From these values and the enthalpy of formation of the NO(2) radical, a CF(2)BrCFBrOO-NO(2) bond dissociation enthalpy of 26.0 ± 2 kcal mol(-1) was estimated.     

An Artificial Receptor for Dimethyl Aspartate

[trans-5,15-Bis(2,7-dihydroxy-1-naphthyl)-2,3,7,8,12,13,17,18-octaethylporphyrinato]zinc(II) (1), a trifunctionalized porphyrin host, was prepared as a receptor for amino acid derivatives, particularly those having a hydrogen-bonding site in the side chain. The free energy changes for the binding of Leu-OMe, Asp-OMe, and Glu-OMe to 1 were -5.8 kcal/mol, -6.6 kcal/mol, and -5.9 kcal/mol, showing a selectivity for Asp-OMe. (1)H NMR titration experiments indicated that three simultaneous attractive interactions, one coordination interaction, and two hydrogen-bonding interactions, are operating in the host-guest complex. The preference for Asp-OMe over Glu-OMe was found to originate from the favorable enthalpy term for Asp-OMe. The free energy change, the enthalpy change, and the entropy change were determined and split into contributions arising from coordination interaction and from hydrogen-bonding interactions by use of reference hosts. Comparison of enthalpy and entropy changes suggests that the host-guest complex becomes more ordered as the number of recognition pairs increases.     

Photoinduced carbon monoxide migration in a synthetic heme-copper complex

Time-resolved infrared (TRIR) flash photolytic techniques have been employed to initiate and observe the efficient dissociation of CO from a synthetic heme-CO/copper complex, [((6)L)Fe(II)(CO)..Cu(I)](+) (2), in CH(3)CN and acetone at room temperature. In CH(3)CN, a significant fraction of the photodissociated CO molecules transiently bind to copper (nu(CO)(Cu) = 2091 cm(-)(1)) giving [((6)L)Fe(II)..Cu(I)(CO)](+) (4), with an observed rate constant, k(1) = 1.5 x 10(5) s(-)(1). That is followed by a slower direct transfer of CO from the copper moiety back to the heme (nu(CO)(Fe) = 1975 cm(-)(1)) with k(2) = 1600 s(-)(1). Additional transient absorption (TA) UV-vis spectroscopic experiments have been performed monitoring the CO-transfer reaction by following the Soret band. Eyring analysis of the temperature-dependent data yields DeltaH(double dagger) = 43.9 kJ mol(-)(1) for the 4-to-2 transformation, similar to that for CO dissociation from [Cu(I)(tmpa)(CO)](+) in CH(3)CN (DeltaH(double dagger) = 43.6 kJ mol(-)(1)), suggesting CO dissociation from copper regulates the binding of small molecules to the heme within [((6)L)Fe(II)..Cu(I)](+)(3). Our observations are analagous to those observed for the heme(a3)/Cu(B) active site of cytochrome c oxidase, where photodissociated CO from the heme(a3) site immediately (ps) transfers to Cu(B) followed by millisecond transfer back to the heme.     

Arene-cation interactions of positive quadrupole moment aromatics and arene-anion interactions of negative quadrupole moment aromatics

Intermolecular interactions involving aromatic pi-electron density are widely believed to be governed by the aromatic molecular quadrupole moment, Theta(zz). Arene-cation binding is believed to occur primarily with negative Theta(zz) aromatics, and arene-anion binding is believed to occur largely with positive Theta(zz) aromatics. We have performed quantum mechanical computations that show the cation binding of positive Theta(zz) aromatics and the anion binding of negative Theta(zz) aromatics is quite common in the gas phase. The pi-electron density of hexafluorobenzene, the prototypical positive Theta(zz ) aromatic (experimental Theta(zz) = 9.5 +/- 0.5 DA), has a Li+ binding enthalpy of -4.37 kcal/mol at the MP2(full)/6-311G**level of theory. The RHF/6-311G** calculated Theta(zz) value of 1,4-dicyanobenzene is +11.81 DA, yet it has an MP2(full)/6-311G** Li+ binding enthalpy of -12.65 kcal/mol and a Na+ binding enthalpy of -3.72 kcal/mol. The pi-electron density of benzene, the prototypical negative Theta(zz) aromatic (experimental Theta(zz) = -8.7 +/- 0.5 DA), has a F- binding enthalpy of -5.51 kcal/mol. The RHF/6-311G** calculated Theta(zz) of C6H2I4 is -10.45 DA, yet it has an MP2(full)/6-311++G** calculated F- binding enthalpy of -20.13 kcal/mol. Our results show that as the aromatic Theta(zz) value increases the cation binding enthalpy decreases; a plot of cation binding enthalpies versus aromatic Theta(zz) gives a line of best of fit with R2 = 0.778. No such correlation exists between the aromatic Theta(zz) value and the anion binding enthalpy; the line of best fit has R2 = 0.297. These results are discussed in terms of electrostatic and polarizability contributions to the overall binding enthalpies.