Stereochemical studies—XXX : Stereoselective synthesis of D-ribose from L-glutamic acid

A new stereoselective synthesis of D-ribose (14) starting from L-glutamic acid (1) is described, by making use of the chiral center of 1 as that at C-4 of 14. Oxidation of methyl 5-O-benzyl-2,3-dideoxy-D-pent-2-enofuranoside (10) with potassium permanganate or osmium tetroxide was shown to occur preferentially from the rear side of the OMe group at C-1.     

Quantum chemical studies of the hydration of Sr2+ in vacuum and aqueous solution

The geometric structures of gas-phase Sr(2+) hydrates are calculated quantum chemically by using hybrid (B3LYP) and meta-GGA (TPSS) density functional theory, and a range of thermodynamic data (including sequential bond enthalpies, entropies and free energies for the reactions Sr(2+)(H(2)O)(n-1)+H(2)O→Sr(2+)(H(2)O)(n)) are shown to be in excellent agreement with experiment. When the number of coordinating water molecules exceeds six, such that water begins to occupy the second solvation shell, it is found that detailed analysis based on both geometrical and conformational entropy is required in order to confidently identify the experimentally observed structures. The significant increase in coordination number observed experimentally between the gas- and aqueous-phase species is successfully reproduced, as is the first solvation shell geometry. Inaccurate second shell geometries imply that larger model systems may be required to achieve agreement with experiment. Candidate species for on-going computational studies of the interaction of hydrated Sr(2+) with brucite surfaces have been identified.     

Proton hydration in aqueous solution: Fourier transform infrared studies of HDO spectra

This paper attempts to elucidate the number and nature of the hydration spheres around the proton in an aqueous solution. This phenomenon was studied in aqueous solutions of selected acids by means of Fourier transform infrared spectroscopy of semiheavy water (HDO), isotopically diluted in H(2)O. The quantitative version of difference spectrum procedure was applied for the first time to investigate such systems. It allowed removal of bulk water contribution and separation of the spectra of solute-affected HDO. The obtained spectral data were confronted with ab initio calculated structures of small gas-phase and polarizable continuum model (PCM) solvated aqueous clusters, H+(H2O)n, n=2-8, in order to help in establishing the structural and energetic states of the consecutive hydration spheres of the hydrated proton. This was achieved by comparison of the calculated optimal geometries with the interatomic distances derived from HDO band positions. The structure of proton hydration shells outside the first hydration sphere essentially follows the model structure of other hydrated cations, previously revealed by affected HDO spectra. The first hydration sphere complex in diluted aqueous solutions was identified as an asymmetric variant of the regular Zundel cation [The Hydrogen Bond: Recent Developments in Theory and Experiments, edited by P. Schuster, G. Zundel, and C. Sandorfy (North-Holland, Amsterdam, 1976), Vol. II, p. 683], intermediate between the ideal Zundel and Eigen structures [E. Wicke et al., Z. Phys. Chem. Neue Folge 1, 340 (1954)]. Evidence was found for the existence of strong and short hydrogen bonds, with oxygen-oxygen distance derived from the experimental affected spectra equal 2.435 A on average and in the PCM calculations about 2.41-2.44 A. It was also evidenced for the first time that the proton possesses four well-defined hydration spheres, which were characterized in terms of hydrogen bonds' lengths and arrangements. Additionally, an outer hydration layer, shared with the anion, as well as loosely bound water molecules interacting with free electron pairs of the central complex were detected in the affected spectra.     

Calorimetry in the studies of cement hydration

Calorimetry was applied to an investigation of the early hydration of Portland cement (PC)–calcium aluminate cement (CAC) pastes. The heat evolution measurements were related to the strength tests on small cylindrical samples and standard mortar bars. Different heat-evolution profiles were observed, depending on the calcium aluminate cement/Portland cement ratio. The significant modification of Portland cement heat evolution profile within a few hours after mixing with water was observed generally in pastes containing up to 25% CAC. On the other hand the CAC hydration acceleration effect was also obtained with the 10% and 20% addition of Portland cement. As one could expect the compressive and flexural strength development was more or less changed—reduced in the presence of larger amount of the second component in the mixture, presumably because of the internal cracks generated by expansive calcium sulfoaluminate formation.     

On the hydration of the phosphocholine headgroup in aqueous solution

The hydration of the phosphocholine headgroup in 1,2-dipropionyl-sn-glycero-3-phosphocholine (C(3)-PC) in solution has been determined by using neutron diffraction enhanced with isotopic substitution in combination with computer simulation techniques. The atomic scale hydration structure around this head group shows that both the -N(CH(3))(3) and -CH(2) portions of the choline headgroup are strongly associated with water, through a unique hydrogen bonding regime, where specifically a hydrogen bond from the C-H group to water and a strong association between the water oxygen and N(+) atom in solution have both been observed. In addition, both PO(4) oxygens (P=O) and C=O oxygens are oversaturated when compared to bulk water in that the average number of hydrogen bonds from water to both X=O oxygens is about 2.5 for each group. That water binds strongly to the glycerol groups and is suggestive that water may bind to these groups when phosophotidylcholine is embedded in a membrane bilayer.     

Kinetic studies on the oxidation of uranium(IV) in nitric acid solution

The kinetics of oxidation of U(IV) in nitric acid solution by nitrous acid and air oxygen have been studied. The effects of concentrations of U(IV), nitric acid, hydrogen ion and nitrous acid in aqueous solution or oxygen in gas on the oxidation rate have been examined. The oxidation rate increases with increasing temperature and the activation energies are 47 kJ mol^–1 for nitrous acid and 91 kJ mol^–1 for oxygen. The mechanisms for both oxidation reactions are discussed.     

Secondary nucleation of the beta-polymorph of L-glutamic acid on the surface of alpha-form crystals

Evidence is presented for the secondary nucleation of beta-L-glutamic acid on the surface of the alpha-polymorph, using a combination of Scanning Electron Microscopy and Raman spectroscopy.     

Spectroscopic studies of the metal complexes of ethylenediaminetetra-acetic acid in aqueous solution

Aqueous solutions of the metal complexes of ethylenediaminetetra-acetic acid (EDTA) are widely used in analysis; though X-ray diffraction methods cannot be directly used for structural determination in solution, ultraviolet-visible region, vibrational and NMR spectroscopy studies demonstrate that the species in solution adopt a similar range of stereochemistries to those determined for the solid state. Thus a review of the spectroscopic properties of the solutions suggests that chelates are formed in which the denticity of EDTA varies from one to six and the co-ordination number about the metal from four to nine.     

Porous scaffolds based on cross-linking of poly(L-glutamic acid)

Porous scaffolds based on water-soluble PLGA and CS were prepared. The pores were verified to be alveolate, uniform and continuous. The effects of freezing temperature, freeze-drying time, solid content and molecular weight of reactants on the pore structure of the scaffolds were studied. The scaffold morphology could be adjusted by changing the freezing temperature and solid content of reacting polymer. Their degradation rate can be adjusted by changing the proportion of PLGA and CS. The porosity of scaffolds was higher than 90% and the high swelling ratio showed that these scaffolds had excellent hydrophilic performance. The in vitro culture of chondrocytes indicates that the obtained PLGA/CS porous scaffolds are very promising biomaterials for tissue engineering applications.     

Structural studies in aqueous solution of new binuclear lanthanide luminescent peptide conjugates

The synthesis, NMR and luminescent analysis of a novel polypeptide possessing a sensitising naphthalimide antenna at the amino terminus, and a model compound with a Trp moiety, and their Eu(iii) and Tb(iii) complexes are described.     

FMO-MD simulations on the hydration of formaldehyde in water solution with constraint dynamics

Full-quantum mechanical fragment molecular orbital-based molecular dynamics (FMO-MD) simulations were applied to the hydration reaction of formaldehyde in water solution under neutral conditions. Two mechanisms, a concerted and a stepwise one, were considered with respect to the nucleophilic addition and the proton transfer. Preliminary molecular orbital calculations by means of polarized continuum model reaction field predicted that the hydration prefers a concerted mechanism. Because the calculated activation barriers were too high for free FMO-MD simulations to give reactive trajectories spontaneously, a More O'Ferrall-Jencks-type diagram was constructed from the statistical analysis of the FMO-MD simulations with constraint dynamics. The diagram showed that the hydration proceeds through a zwitterionic-like (ZW-like) structure. The free energy changes along the reaction coordinate calculated by means of the blue moon ensemble for the hydration and the amination of formaldehyde indicated that the hydration proceeds through a concerted process through the ZW-like structure, whereas the amination goes through a stepwise mechanism with a ZW intermediate. In inspection of the FMO-MD trajectories, water-mediated cyclic proton transfers were observed in both reactions on the way from the ZW-like structure to the product. These proton transfers also have an asynchronous character, in which deprotonation from the nucleophilic oxygen atom (or nitrogen atom for amination) precedes the protonation of the carbonyl oxygen atom. The results showed the strong advantage of the FMO-MD simulations to obtain detailed information at a molecular level for solution reactions.     

Quantum chemical studies on tautomerism of barbituric acid in gas phase and in solution

Ab initoand density functional theory (DFT) methods were used to study the tautomers of barbituric acid in the gas phase and in a polar medium. In the gas phase, the tautomers were optimized at the HF/6-31G^*, MP2/6-31G^*and B3LYP/6-31G^*, B3PW91/6-31G^*levels of theory. The self-consistent reaction field theory (SCRF) at the HF/6-31G^*level of theory has been used to optimize the tautomers in a polar medium. The relative stability of the tautomers was compared in the gaseous and polar mediums. The ability of maximum hardness principle to predict the stable tautomer has been studied. The ¹³C-NMR chemical shift for carbon atoms in the tautomers was calculated and the results are discussed.     

Theoretical studies on the structure of hydration in perfluorinated lithium salt membranes

Using an ab initio molecular orbital (MO) method, the normal frequencies are calculated for perfluorinated lithium sulfonate and carboxylate membranes by construction of a cluster model, which severs the ion core from the polymer chain, and then analysis of the experimentally observed infrared (IR) spectra is carried out. During the process of dehydration, small sharp peaks at about 3650 and 3700 cm(-1) appeared on the shoulder of the broad band at about 3500 cm(-1). These sharp peaks are identified as the symmetric and asymmetric stretching modes of the free water molecule. Furthermore, by estimation of the evaporation ratio based on thermochemical analysis, it can be assumed that the first hydration shells are naked in some part of the ion core, thereby allowing evaporation to take place within the external hydration shell during the dehydration process.     

Detection of highly oriented aggregation of L-glutamic acid-derived lipids in dilute organic solution

Aggregation structures in organic gels and xerogels formed from L-glutamic acid-derived lipids were investigated by scanning and transmission electron microscopies, X-ray analyses, and 1H NMR and IR spectroscopic methods. These analyses showed that the gels were produced through the formation of highly oriented aggregates based on a single layer and a remarkable development of their fibrous morphology. We also describe how the critical aggregation concentration can be observed at a concentration below the critical gel concentration by using a dye-complexation method with a cyanine dye, NK-77.     

Detection of highly oriented aggregation of L-glutamic acid-derived lipids in dilute organic solution

Aggregation structures in organic gels and xerogels formed from L-glutamic acid-derived lipids were investigated by scanning and transmission electron microscopies, X-ray analyses, and 1H NMR and IR spectroscopic methods. These analyses showed that the gels were produced through the formation of highly oriented aggregates based on a single layer and a remarkable development of their fibrous morphology. We also describe how the critical aggregation concentration can be observed at a concentration below the critical gel concentration by using a dye-complexation method with a cyanine dye, NK-77.