Rhenium(II) nitrosyl complexes: synthesis,characterization, DFT calculations and DNA nuclease activity

The rhenium(II) dinitrosyl and mononitrosyl complexes, i.e. [Re(NO)₂(CN)₄]·(Phen)₂·2H₂O (1) and PhenH[Re(NO)(CN)₄(H₂O)]·(Phen)·3H₂O (2) have been isolated and characterized. The X-ray crystal structure of 2 reveals that Re(II) is octahedrally coordinated with one nitrosyl, four cyanides, and one water, with one phenanthroline protonated to compensate the charge of the Re(II) center. The crystal structure shows chemically significant non-covalent interactions like hydrogen bonding involving the uncoordinated water and π–π interactions between phenanthrolinium and phen. The structures of both complexes have been optimized by DFT. Absorption and emission spectral studies and viscosity measurements indicate that both 1 and 2 interact with calf thymus DNA through partial intercalation of DNA bases. The intrinsic-binding constants, obtained from UV–vis spectroscopic studies, are 1.2?×?10⁴ and 7.2?×?10⁴?M^?1 for 1 and 2, respectively. Both 1 and 2 are capable of inducing cleavage of plasmid DNA in the presence of H₂O₂ to form the supercoiled form to nicked circular form. The spectroscopic results of DNA binding are supported by molecular docking studies.     

Synthesis,crystal structure,solid-state fluorescence,and interaction with DNA of mononuclear La(III) complex: La(Phen)2L2(NO3)

A mononuclear complex, La(Phen)₂L₂(NO₃) (Phen?=?1,10-phenanthroline, L?=?2-ethylphenylacetic acid), was synthesized by the reaction of La(NO₃)₃·H₂O, Phen and L at room temperature. The central ion shows 10-coordination with two Phen and two L molecules. Elemental analysis, IR spectra, and X-ray single-crystal diffraction were carried out to determine the composition and crystal structure. Solid fluorescence shows the luminescent properties of the complex. DNA-binding properties of the complex were examined by fluorescence spectra. The capability of cleavage of pBR322 DNA by the complex was investigated by agarose gel electrophoresis, showing cleaving efficiency.     

Lanthanoid metal nitrates with hydrogen bonded hexamethylenetetramine

Cerium, praseodymium, and neodymium nitrate complexes with hydrogen bonded hexamethylenetetramine (HMTA) of the formula [Ce(NO₃)₂(H₂O)₅](HMTA)₂(NO₃)(H₂O)₃, [Pr(NO₃)₂(H₂O)₆]₂[Pr(H₂O)₉](HMTA)₆(NO₃)₆(H₂O)₄ and [Nd(NO₃)₂(H₂O)₅](HMTA)₂(NO₃)(H₂O)₃ have been prepared and characterized by X-ray crystallography. All the complexes belong to monoclinic crystal system. Ce and Nd complexes have P21/n space group, whereas Pr complex has C2/c. Thermal analyses of these complexes were carried out using TG, DSC, which showed their multi-step decomposition. Kinetics of thermolysis has been done by applying model fitting as well as model free isoconversional method. In order to see the response of rapid heating, ignition delay measurements were carried out. The thermal decomposition pathways have also been demonstrated. On the basis of thermal studies the thermal stability of the complexes was found in the order; Pr > Ce > Nd. In order to identify the end products of thermolyses, X-ray diffraction patterns of end product were carried out which showed the formation of corresponding metal oxides.     

Synthesis,spectral characterization,crystal structures of lanthanide(III) pyrrolidine dithiocarbamate complexes and their catalytic activity

A series of lanthanide(III) pyrrolidine dithiocarbamate complexes [Ln(Pyrrol-Dtc)₃(Phen)] {Pyrrol-Dtc = pyrrolidine dithiocarbamate; Phen = 1,10-phenanthroline; Ln = La(III), Ce(III), Pr(III), Nd(III), Sm(III), Gd(III), Tb(III), Dy(III), Er(III)} have been synthesized and structurally characterized. The molecular structures of [La(Pyrrol-Dtc)₃(Phen)], [Pr(Pyrrol-Dtc)₃(Phen)], [Sm(Pyrrol-Dtc)₃(Phen)], and [Dy(Pyrrol-Dtc)₃(Phen)] have been confirmed using single crystal XRD studies. The results reveal that in these complexes, the central Ln(III) ion is coordinated to three Pyrrol-Dtc and one Phen and possesses a distorted dodecahedron geometry. Catalytic activity of these complexes in trimethylsilylcyanation reaction has been studied.     

Copper complexes with a flexible piperazinyl arm: nuclearity driven catecholase activity and interactions with biomolecules

Three new Cu(II) complexes, [Cu(HL¹)(pyridine)(H₂O)](ClO₄)₂·2MeOH (1), [Cu₂(HL¹)₂(NO₃)₂](NO₃)₂·3H₂O (2) and [Cu(HL₂)(NO₃)₂]·MeCN (3), have been synthesized from two Schiff base ligands [HL¹ = 1-phenyl-3-((2-(piperazin-4-yl)ethyl)imino)but-1-en-1-ol and HL² = 4-((2-(piperazin-1-yl)ethyl)imino)pent-2-en-2-ol] using the chair conformer of a flexible piperazinyl moiety. Structural analysis reveals that 1 and 3 are monomeric Cu(II) complexes consisting of five- and six-coordinate Cu(II), respectively, whereas 2 is a dinuclear Cu(II) complex consisting of two different Cu(II) centers, one square planar with the other distorted octahedral. Screening tests were conducted to quantify the binding of 1–3 towards DNA and BSA as well as the DNA cleavage activity of these complexes using gel electrophoresis. Enzyme kinetic studies were also performed for the complexes mimicking catecholase-like activities. Antibacterial activities of these complexes were also examined towards Methicillin-Resistant Staphylococcus aureus bacteria. The results reflect that 2 is more active than the monomeric complexes, which is further corroborated by density functional theory study.     

Synthesis,characterization and DNA nuclease activity of oxo-peroxomolybdenum(VI) complexes

The synthesis and structural characterization of two oxo-peroxo molybdenum(VI) complexes, [Mo(O)(O)₂(PAA)]^? (1) and [Mo(O)(O)₂(PAH)]^? (2), with phenylacetic acid (PAA) and 2-phenylacetylhydroxamic acid (PAHH) ligands have been accomplished. The coordination geometry of the oxo-peroxo molybdenum(VI) complexes is found to be pentagonal bipyramidal where, in both cases, the ligands are coordinated in bidentate fashion through oxygen atoms. The binding affinities of 1 and 2 with calf-thymus DNA (CT DNA) are determined using absorption spectroscopic measurements. The spectroscopic as well as cyclic voltammetric (CV) studies and viscosity measurements indicate that both complexes interact with CT DNA in the groove. The intrinsic binding constants are 5.2 × 10⁴ M^?1 and 7.3 × 10⁴ M^?1 for 1 and 2, respectively, from UV–vis studies. Complexes 1 and 2 show nuclease activity with plasmid DNA in the presence of H₂O₂. Concentration-dependent nuclease study suggests that 2 possesses higher ability to cleave plasmid DNA compared to 1. The experimental results of the binding of 1 and 2 with DNA are further supported by molecular docking studies.     

DNA-binding and nuclease activity of 1,10-phenanthroline-based thiocyanato,acetato, azido and benzoato bridged dinuclear copper(II) complexes

The mononuclear Cu(II) complex [Cu(phen)(H₂O)(NO₃)₂] (1), obtained by the reaction of 1,10-phenanthroline with Cu(NO₃)₂·3H₂O in methanol solution, reacts with anionic ligands SCN⁻, AcO⁻, N₃ ⁻ and PhCO₂ ⁻ in MeOH solution to form the stable binuclear complexes [Cu₂(H₂O)₂(phen)₂(μ-X)₂]₂ (NO₃)₂, where X = SCN⁻ (2), AcO⁻ (3), N₃ ⁻ (4) or PhCO₂ ⁻(5). The molecular structure of complex 3 was determined by single-crystal X-ray diffraction studies. These complexes were characterized by electronic, IR, ESR, magnetic moments and conductivity measurements. The electrochemical behaviour of the complexes was investigated by cyclic voltammetry. The interactions of these complexes with calf thymus DNA have been investigated using absorption spectrophotometry. Their DNA cleavage activity was studied on double-stranded pBR322 plasmid DNA using gel electrophoresis experiments in the absence and presence of H₂O₂ as oxidant.     

由β-二酮和三苯氧膦配体构筑的钕三元配合物的合成、晶体结构和荧光性质

在温和条件下合成了2种以β-二酮和三苯氧膦为配体的钕三元配合物[Nd(TTA)_3(TPPO)_2](1)(TTA=2-噻吩甲酰三氟丙酮,TPPO=三苯氧膦)和[Nd(BFA)_3(TPPO)_2](2)(BFA=4,4,4-三氟-1-苯基-1,3丁二酮),获得了单晶并通过X射线单晶衍射确定了配合物结构。晶体分析显示,2种配合物均为八配位结构,属于三斜晶系,P1空间群。采用元素分析、红外光谱和热重分析对2种配合物进行了结构表征;通过近红外荧光分析,探讨了配合物的荧光特征。     

DNA binding,cleavage, and cytotoxicity of binuclear phenolate nickel(II) complexes

Three binuclear phenolate complexes, [Ni₂(L¹)₂(OAc)](BPh₄)·DMF (1), [Ni₂(L²)₂(OAc)](BPh₄) (2), and [Ni₂(L³)₂(OAc)](OH)·3H₂O (3), where L¹ = 2-{[bis-(2-hydroxy-ethyl)-amino]-methyl}-4-methyl-phenol, L² = 2-{[bis-(2-hydroxy-ethyl)-amino]-methyl}-4-methoxy-phenol, and L³ = 2-{[bis-(2-hydroxy-ethyl)-amino]-methyl}-4-tert-butyl-phenol), have been synthesized. Single-crystal diffraction reveals that all the metal atoms are in a distorted octahedral geometry. The interactions of the complexes with calf thymus DNA (CT-DNA) have been investigated by UV–vis absorption, fluorescence emission, and circular dichroism spectroscopy and viscosity measurements. Furthermore, DNA cleavage mechanism shows that the complexes may be capable to promote DNA cleavage through oxidative DNA damage pathway, which is indicative of the involvement of hydroxyl radical, singlet oxygen, or singlet oxygen-like entity in the cleavage process. Cytotoxicity studies on the Hela and MCF-7 cancer cell lines show that complexes 1–3 exhibit excellent activity toward the tested tumor cell lines with respect to the standard drug carboplatin, revealing that they have the potential to act as effective metal-based anticancer drugs.     

两个带呋喃悬臂不对称大环双核铜配合物的合成、结构及性质

合成并表征了2个不对称大环双核铜配合物[Cu₂（L¹）Cl₂]·CH₃CN（1）和[Cu₂（L²）Br₂]·CH₃CN·H₂O（2）。配合物与CT-DNA的作用通过紫外-可见光谱,粘度实验,圆二色谱和凝胶电泳实验进行了研究。紫外-可见光谱的结果表明配合物与DNA的结合常数分别为6.2×10⁵和7.2×10⁵,圆二色谱的实验表明配合物能与DNA较好的结合,粘度实验表明配合物与DNA的结合为非典型的插入模式,凝胶电泳实验显示配合物通过氧化机理对DNA有较强的切割活性。     

Synthesis,Crystal Structures and Luminescent Properties of Terbium,Neodymium and Yttrium Complexes with a New Amide Type Ligand

Solid complexes of terbium, neodymium and yttrium nitrates with an amide type ligand, N‐benzyl‐2‐(benzyloxy)benzamide ( L ) have been prepared in ethyl acetate and characterized by elemental analysis and IR spectroscopy. The crystal and molecular structures of the complexes Tb L ₃(NO₃)₃, Nd L ₃(NO₃)₃ and Y L ₃(NO₃)₃ have been determined by single crystal X‐ray diffraction. The crystal structures of the complexes are similar. The structures show that the crystal consists of two similar but independent molecules in the asymmetric unit and the metal ion is coordinated toward nine donor atoms, three of which belong to the oxygen atoms of three monodentate ligands and six oxygen atoms from three bidentate nitrates. Furthermore, the RE L ₃(NO)₃ complex units are linked by the intermolecular hydrogen bonds to form a three‐dimensional net. At the same time, the luminescent properties of the ligand and the complex Tb L ₃(NO₃)₃ were studied as well.     

Synthesis,characterization and medical efficacy (hepatoprotective and antioxidative) of albendazole-based copper(II) complexes – an experimental and theoretical approach

A series of albendazole-based copper(II) complexes with different counter anions, [Cu(Albz)(H₂O)₂](ClO₄)₂ (1), [Cu(Albz)₂(Cl)]Cl·2H₂O (2), [Cu(Albz)₂(NO₃)](NO₃) (3), and [Cu₂(Albz)₂(μ-SO₄)₂(H₂O)₂] (4) (Albz = albendazole), have been synthesized and characterized. Their structures and properties were characterized by elemental analysis, thermal analysis (TGA, DTG and DTA), IR, UV–vis and ESR spectroscopies, cyclic voltammetry, electrical molar conductivity, and magnetic moment measurements. A square-planar geometry is proposed for 1, whereas the five-coordinate copper(II) complexes 2, 3, and 4 have a square pyramidal geometry. Theoretical calculations (DFT) using B3LYP/6–311 + G(d,p) level of theory corroborated the experimental results to investigate both the drug Albz and its copper(II) complex, 1. The hepatoprotective and antioxidative efficacy of Albz and 1–4 were evaluated against carbon tetrachloride-induced acute hepatotoxicity in rats. Hepatotoxicity in experimental rats was evidenced by significant decrease in the antioxidant enzyme activities (SOD, GSH-S-transfers, and GSH-Rd levels). The results have strong impact for designing anticancer drugs, combined with their potential cytotoxic and antioxidant activities, which can be targeted selectively against cancer cells and increase their therapeutic index and advantages over other anticancer drugs. The DNA cleavage studies of Albz and its copper(II) complexes using genomic DNA indicated that Albz has no role in cleavage of DNA, and only 1 played a marked role in the DNA cleavage without any external additives.     

Synthesis, spectroscopic, and structural aspects of two trinuclear cyano-bridged heterometallic complexes

Two new cyano-bridged trinuclear heterometallic complexes [Sr₂(Phen)₄(CF₃CO₂)(H₂O)₃Fe(CN)₆]·2H₂O (1) [Ca₂(Phen)₄(CF₃CO₂)(H₂O)Co(CN)₆]·2H₂O (2) (where Phen=1,10-phenanthroline) have been synthesized and their crystal structures have been determined. The structure of complex (1) features a central [Fe(CN)₆]³⁻ unit that links a monocation, [Sr(Phen)₂(OH₂)(OOCCF₃)]⁺ and a dication, [Sr(Phen)₂(OH₂)₂]²⁺ via two trans cyanide bridges. The complex (2) features a central [Co(CN)₆]³⁻ unit that links two monocations of [Ca(Phen)₂(OH₂)(OOCCF₃)]⁺ (the positions of the trifluoro acetate and water molecules are disordered over two positions) via two trans cyanide bridges. Each metal atom is seven coordinated and achieves pentagonal bipyramidal geometry. Two cocrystallized water molecules are present in both the complexes. The presence of an extensive network of hydrogen bonding imparts the overall stability to both the systems.     

Synthesis and characterization of lanthanide complexes prepared with 2-((E)-(1-hydroxy-2-methylpropan-2-ylimino)methyl)-6-methoxyphenol

Rare-earth complexes of the general formula [Ln(H₂L₁)₂(NO₃)₃] [Ln = Gd (1), Ho (2) or Nd (3)] were prepared from an o-vanillin derived Schiff base ligand, 2-((E)-(1-hydroxy-2-methylpropan-2-ylimino)methyl)-6-methoxyphenol (H₂L₁). The single-crystal X-ray diffraction studies and SHAPE analyses of the Gd(III) and Ho(III) complexes show that the complexes are ten-coordinate and exhibit distorted tetradecahedron geometries. The phenolate oxygen-bridged dinuclear complex, [Ce₂(H₂L₁)(ovan)₃(NO₃)₃] (4, ovan = monodeprotonated o-vanillin), was obtained from the reaction of Ce(NO₃)₃?6H₂O with H₂L₁. X-ray analysis revealed that hydrolysis of H₂L₁ occurred to yield o-vanillin, which bridged two cerium atoms with the Ce?Ce distance equal to 3.8232(6) Å. The Ce(III) ions are both ten-coordinate, but have different coordination environments, showing tetradecahedron and staggered dodecahedron geometries, respectively. With proton migration occurring from the phenol group to the imine function, complexation of the lanthanides to the ligand gives the Schiff base a zwitterionic phenoxo-iminium form.     

Synthesis,crystal structure and DFT calculations of octahedral nickel(II) complexes derived from N′-[(E)-phenyl(pyridin-2-yl)methylidene]benzohydrazide

The two new nickel(II) complexes, [Ni(HL)(L)](NO₃)?H₂O (1) and [Ni(L)₂] (2) (where HL/L = N′-[(E)-phenyl(pyridin-2-yl)methylidene]benzohydrazide), have been synthesized and characterized by elemental analysis, spectroscopic, magnetic susceptibility, and cyclic voltammetric measurements. Single-crystal X-ray analysis of [Ni(HL)(L)](NO₃)?H₂O (1) and [Ni(L)₂] (2) has revealed the presence of a distorted octahedral geometry around nickel(II). The X-ray and spectral characterizations have confirmed the existence of the keto-enol form of the ligands in the complexes. The electronic structures and spectral properties of the ligands and the complexes have been explained by DFT and TDDFT calculations. Superoxide dismutase activity of these complexes has also been measured.     

Synthesis,characterization, and antibacterial evaluation of copper(II) complexes supported by phenylacetic acid derivatives,and diamine ligands

Four mixed-ligand complexes, [Cu₃(cpa)₆(pda)₁] (1) (cpa = 4-chlorophenylacetic acid, pda = 1,2-diaminopropane), [Cu₃(fpa)₆(tn)₁] (2) (fpa = 4-fluorophenylacetic acid, tn = 1,3-diaminopropane), [Cu₃(cpa)₆(en)₁] (3) (cpa = 4-chlorophenylacetic acid, en = ethylenediamine), and [Cu₃(fpa)₆(pda)₁] (4) (fpa = 4-fluorophenylacetic acid, pda = 1,2-diaminopropane), were synthesized by reacting 4-chlorophenylacetic acid or 4-fluorophenylacetic acid, the diamines, and metal salts. Their structures were determined by elemental analysis and single-crystal X-ray diffraction analysis. The antimicrobial activities for the metal complexes were evaluated against Escherichia coli, Pseudomonas putida, Bacillus subtilis, and Bacillus cereus. The antimicrobial results indicated that the four synthesized complexes displayed good inhibitory activity against E. coli and B. subtilis, and could be promising antibacterial agents.     

Synthesis,crystal structure,and fluorescence properties of two 1-D chain polymers extended by a semi-rigid bis(triazole) ligand

Two 1-D luminescent metal-organic frameworks with identical structures, {[Mn(BBPTZ)₂(MeCN)₂]·(ClO₄)₂}_n (1) and {[Zn(BBPTZ)₂(MeCN)₂]·(MeCN)₂·(ClO₄)₂}_n (2), have been synthesized under solvent diffusion evaporation and characterized by elemental analyses, thermal analyses and single-crystal X-ray diffraction. Both complexes crystallize in the monoclinic system, space group C2/c with six-coordinate M(II). Thermal decompositions of the complexes have been studied using thermogravimetric analyses (TGA). The complexes exhibit a significant fluorescence quenching effect to Fe³⁺ in acetonitrile solution. The LoDs (Limit of Detection) of the complexes to Fe³⁺ are 2.59 × 10^?8 M and 1.57 × 10^?8 M for 1 and 2, respectively. The complexes could be applied to efficient chemosensor for Fe³⁺ detection.     

Synthesis,characterization and in vitro DNA binding studies of a new copper(II) complex containing an antiviral drug,valganciclovir

A new complex, [Cu(valcyte)₂(NO₃)₂], in which valcyte served as a valganciclovir drug, was synthesized and characterized by different physicochemical methods. Optimization of ligand structures and their complexes with Cu²⁺ were performed by semi-empirical and DFT methods. Binding interaction of this complex with calf-thymus DNA (ct-DNA) was explored by emission, absorption, circular dichroism and viscosity techniques. Additionally, cell line targeting was studied and cytotoxic effects of [Cu(valcyte)₂(NO₃)₂] (0.0–160 μg) on AGS and MCF-7 cell lines were reported. Percentage of Cell Viability and Apoptotic Index were assessed. The complex displayed significant binding properties to ct-DNA. Undertaking fluorometric studies, the binding mode of the complex with ct-DNA was explored utilizing Hoechst as a fluorescence probe, indicating the binding to be of groove mode. The DNA viscosity altered slightly in presence of the complex. Enthalpy and entropy changes during the interaction showed that the process is endothermic, with the complex mainly bound to ct-DNA by hydrophobic attraction. Values of ΔG revealed a spontaneous reaction between DNA and the complex. Optimized docked model of DNA–complex mixture confirmed the experimental results. The results of MMFF94 calculations indicated stability of [Cu(valcyte)₂(NO₃)₂] after docking with the modeled DNA profile, as compared to the DNA profile and valganciclovir results before the docking process. Cytotoxicity studies showed that an increase in [Cu(valcyte)₂(NO₃)₂] may result in a significant decrease in cell viability and increase apoptosis index in the treated cells, as compared to valganciclovir treated cells (p < 0.05). The findings further showed that [Cu(valcyte)₂(NO₃)₂] has potential for use in cancer therapy.     

Copper complexes as chemical nucleases

Redox active mononuclear and binuclear copper(II) complexes have been prepared and structurally characterized. The complexes have planar N-donor heterocyclic bases like 1,10-phenanthroline (phen), dipyridoquinoxaline (dpq) and dipyridophenazine (dppz) ligands that are suitable for intercalation to B-DNA. Complexes studied for nuclease activity have the formulations [Cu(dpq)₂(H₂O)] (ClO₄)₂.H₂O (1), [CuL(H₂O)₂(μ-ox)](ClO₄)₂ (L = bpy,2; phen,3; dpq,4; and dppz,5) and [Cu(L)(salgly)] (L = bpy,6; phen,7; dpq,8; and dppz,9), where salgly is a tridentate Schiff base obtained from the condensation of glycine and salicylaldehyde. The dpq complexes are efficient DNA binding and cleavage active species. The dppz complexes show good binding ability but poor nuclease activity. The cleavage activity of thebis-dpq complex is significantly higher than thebis-phen complex of copper(II). The nuclease activity is found to be dependent on the intercalating nature of the complex and on the redox potential of the copper(II)/copper(I) couple. The ancillary ligand plays a significant role in binding and cleavage activity.     

Synthesis and crystal structure of yttrium(III) and lanthanide(III) complexes with a new terpyridine-like ligand 2,4-bis(3,5-dimethylpyrazol-1-yl)- 6-diethylamino-1,3,5-triazine

A new planar aromatic tridentate terpyridine-like ligand, 2,4-bis(3,5-dimethylpyrazol-1-yl)-6-diethylamino-1,3,5-triazine (L), has been synthesized and the structures of its complexes [YL(NO₃)₃] (1) and [LnL(NO₃)₃(H₂O)]L [Ln?=?La (2), Ce (3), Pr (4), Nd (5), Eu (6)] have been determined by X-ray crystal structural analysis. The structures of the five lanthanoid complexes are isomorphous and isostructural but different from the crystal structure of the yttrium complex [YL(NO₃)₃]. The latter shows a nine-coordinate metal center whereas the crystal structure of the lanthanoid complexes [LnL(NO₃)₃(H₂O)]L show a 10-coordinate metal center. The?π–π?stacking and hydrogen bonding between the coordinated and uncoordinated L molecules sensitized the Ln luminescence. The thermal behavior of the ligand and its complexes is discussed.