Tube and cage C(60)H(60): a comparison with C(60)F(60)

Tube C(60)H(60) (5) with fused five-membered rings is more stable than the cage isomer (1) with isolated five-membered rings. Introduction of endo C-H bonds into structure 5 results in further stabilization, but the most stable tube structure with four endo C-H bonds (7) is higher in energy than the most stable cage structure with ten endo C-H bonds (3) by 74.2 kcal/mol. A comprehensive comparison of C(60)H(60) with C(60)F(60) has been made.     

Cooperative C(60) binding to a porphyrin tetramer arranged around a p-terphenyl axis in 1:2 host-guest stoichiometry

[structure: see text] Porphyrin tetramer 1 was newly designed and synthesized to construct a novel cooperative [60]fullerene (C(60)) binding system. Compound 1 has a p-terphenyl axis, which is expected to act as a scaffold for a guest-binding information transducer. In toluene, 1 can bind 2 equiv of C(60) to produce a 1:2 1/C(60) complex with association constants of 5800 M(-1) (K(1)) and 2000 M(-1) (K(2)). These values are significantly greater than those for control porphyrin dimers such as 2 and 3.     

HCOO在Cu(110)、Ag(110)和Au(110)表面的吸附

采用密度泛函理论(DFT)以及广义梯度近似方法(GGA)计算了甲酸根(HCOO)在Cu(110)、Ag(110)和Au(110)表面的吸附. 计算结果表明, 短桥位是最稳定的吸附位置, 计算的几何参数与以前的实验和计算结果吻合. 吸附热顺序为Cu(110)(-116 kJ·mol-1)>Ag(110)(-57 kJ·mol-1)>Au(110)(-27 kJ·mol-1), 与实验上甲酸根的分解温度相一致. 电子态密度分析表明, 吸附热顺序可以用吸附分子与金属d-带之间的Pauli 排斥来关联, 即排斥作用越大, 吸附越弱. 另外还从计算的吸附热数据以及实验上HCOO的分解温度估算了反应CO2+1/2H2→HCOO的活化能, 其大小顺序为Au(110)>Ag(110)>Cu(110).     

Azobenzene on Cu(110): adsorption site-dependent diffusion

Azobenzene and its derivatives can undergo reversible trans-cis isomerizations when irradiated with light, making them potential candidates for optically sensitive materials and devices. The adsorption and diffusion of azobenzene on the Cu(110) surface was investigated with a variable-temperature scanning tunneling microscope. The trans-isomer was observed and found to occupy two adsorption geometries-an energetically stable and a metastable state. Diffusion occurred along the closed-packed [1 -1 0] direction of the surface, and the diffusivity for the two adsorption states was found to differ by approximately 1 order of magnitude.     

Tilted CO on metal surfaces; CO/Pt(110), CO/Ni(110) and CO/Cu(100)

Tilting of CO at coverages greater than half a monolayer is considered as a mechanism for reducing the CO-CO repulsion. We find qualitative agreement with the experiment for CO/Pt(110), and predict a slightly smaller tilt for CO/Ni(110). For CO/Cu(100), we find that a bend of about 10° greatly reduces the repulsion.     

The molecular orientation of para-sexiphenyl on Cu(110) and Cu(110) p(2x1)O.

Controlling the molecular growth of organic semiconductors is an important issue to optimize the performance of organic devices. Conjugated molecules, used as building blocks, have an anisotropic shape and also anisotropic physical properties like charge transport or luminescence. The main challenge is to grow highly crystalline layers with molecules of defined orientation. The higher the crystallinity, the closer these properties reach their full intrinsic potential, while the orientation determines the physical properties of the film. Herein we show that the molecular orientation and growth can be steered by the surface chemistry, which tunes the molecule-substrate interaction. In addition, the oxygen reconstruction of the surface, demonstrates the flexibility of the organic molecules to adopt a given surface corrugation and their unique possibility to release stress by tilting.     

Towards surface-supported supramolecular architectures: tailored coordination assembly of 1,4-benzenedicarboxylate and Fe on Cu(100)

We present a comprehensive investigation of the modular assembly of surface-supported metal-organic coordination systems with specific topologies and high structural stability formed by vapor deposition of 1,4-benzenedicarboxylic acid molecules and iron atoms on a Cu(100) surface under ultra-high vacuum conditions. By making use of the two carboxylate moieties available for lateral linkage to Fe atoms, we succeeded in the fabrication of distinct Fe-carboxylate coordination architectures at the surface by carefully adjusting the ligand and metal concentration ratio and the temperature of the post-deposition annealing treatment. The mononuclear, 1D-polymeric and fully 2D-reticulated metallosupramolecular arrangements obtained were characterized in situ at the single-molecule level by scanning tunneling microscopy.     

Adsorption of metadiiodobenzene on Cu(110): A theoretical study

In this work, we have computationally modeled the adsorption of 1,3‐diiodobenzene (meta‐diiodobenzene or m‐DIB) on Cu(1 1 0) by means of density functional theory including van der Waals interaction using Grimme's method. We have compared the adsorption energies and structures of 23 possible configurations of the physisorbed molecule. Furthermore, we have simulated STM images for the four most stable configurations using the Tersoff–Hamann approach at different bias voltages. We find that all the adsorption orientations have comparable energy, and we discuss the relative probabilities of experimental observation. We find that the adsorption induces small distortions in the molecular structure of the adsorbate and in some cases an adsorption‐induced symmetry breakdown occurs. We also find evidence that the most stable arrangement is actually a bistable system with interesting symmetry properties. © 2012 Wiley Periodicals, Inc.     

Water clusters on Cu(110): chain versus cyclic structures

Water clusters are assembled and imaged on Cu(110) by using a scanning tunneling microscope. Water molecules are arranged along the Cu row to form "ferroelectric" zigzag chains of trimer to hexamer. The trimer prefers the chain form to a cyclic one in spite of the reduced number of hydrogen bonds, highlighting the crucial role of the water-substrate interaction in the clustering of adsorbed water molecules. On the other hand, the cyclic form with maximal hydrogen bonds becomes more favorable for the tetramer, indicating the crossover from chain to cyclic configurations as the constituent number increases.     

Uracil on Cu(110): a quantitative structure determination by energy-scanned photoelectron diffraction

The local adsorption site of the nucleobase uracil on Cu(110) has been determined quantitatively by energy-scanned photoelectron diffraction (PhD). Qualitative inspection of the O 1s and N 1s soft x-ray photoelectron spectra, PhD modulation spectra, and O K-edge near-edge x-ray adsorption fine structure indicate that uracil bonds to the surface through its nitrogen and oxygen constituent atoms, each in near atop sites, with the molecular plane essentially perpendicular to surface and aligned along the close packed [110] azimuth. Multiple scattering simulations of the PhD spectra confirm and refine this geometry. The Cu-N bondlength is 1.96 ± 0.04 ?, while the Cu-O bondlengths of the two inequivalent O atoms are 1.93 ± 0.04 ? and 1.96 ± 0.04 ?, respectively. The molecule is twisted out of the [110]direction by 11 ± 5°.     

Total oxidation of methanol on Cu(110): a density functional theory study

The partial and total oxidation of methanol on clean and oxygen-precovered Cu(110) has been studied by periodic density functional theory calculations within the generalized gradient approximation. Reaction paths including the geometry and the energetics of several reaction intermediates and the activation barriers between them have been determined, thus creating a complete scheme for methanol oxidation on copper. The calculations demonstrate that the specific structure of oxygen on copper plays an important role in both the partial and the total oxidation of methanol. For lower oxygen concentrations on the surface, the partial oxidation of methanol to formaldehyde is promoted by the presence of oxygen on the surface through the removal of hydrogen in the form of water, which prevents the recombinative desorption of methanol. At larger oxygen concentrations, the presence of isolated oxygen atoms reduces the C-H bond breaking barrier of adsorbed methoxy considerably, thus accelerating the formation of formaldehyde. Furthermore, oxygen also promotes the formation of dioxymethylene from formaldehyde, which then easily decays to formate. Formate is the most stable reaction intermediate in the total oxidation. Thus the formate decomposition represents the rate-limiting step in the total oxidation of methanol on copper.     

Weakly interacting molecular layer of spinning C60 molecules on TiO2 (110) surfaces

The adsorption of C(60), a typical acceptor organic molecule, on a TiO(2) (110) surface has been investigated by a multitechnique combination, including van der Waals density functional calculations. It is shown that the adsorbed molecules form a weakly interacting molecular layer, which sits on the fivefold-coordinated Ti that is confined between the prominent bridging oxygen rows (see figure).     

Dehydrogenative Homocoupling of Alkyl Chains on Cu(110)

Through the interplay of high‐resolution scanning tunneling microscopy imaging and density functional theory calculations, the stepwise dehydrogenative homocoupling of alkyl chains on Cu(110) is demonstrated, proceeding from the intact chain, via the dehydrogenative intermediates, to the formation of the divers final coupling products.     

Formation of hydrogen-bridged cytosine dimers on Cu(110)

Cytosine was adsorbed onto a Cu(110) surface under UHV conditions. Annealing to 370 K resulted in the formation of a (6 x 6)gg low energy electron diffraction (LEED) pattern, even at submonolayer coverages. Examination of this structure with scanning tunneling microscopy (STM) revealed islands of zigzag chains at low coverages and large ordered domains at monolayer saturation. Further annealing to 480 K initiated a phase transition to a (6 x 2)gg structure observed both by LEED and STM. High resolution electron energy loss spectroscopy spectra for both overlayer structures exhibited mainly in-plane modes suggesting upright/tilted species on the surface. Based on the experimental data and supported by density functional theory calculations, a model is proposed for the (6 x 2)gg structure, which involves the formation of deprotonated hydrogen bridge-bonded cytosine dimers, adsorbed through the oxygen atoms.     

C(60)-exTTF-C(60) Dumbbells: cooperative effects stemming from two C(60)s on the radical ion pair stabilization

[structure: see text] The presence of a second C(60) cage in C(60)-exTTF-C(60) triads [exTTF = 9,10-bis(1,3-dithiol-2-ylidene)-9,10-anthraquinone] has beneficial effects on the stabilization of the radical ion pair formed upon irradiation in comparison with the related C(60)-exTTF dyad. Although C(60)-exTTF-C(60) ensembles show no electronic interaction between the electroactive units in the ground state, their irradiation leads to C(60)(*)(-)-exTTF(*)(+)-C(60) species with lifetimes on the order of 600 ns in benzonitrile; these lifetimes are twice those determined for the analogous C(60)-exTTF dyad.     

Probing enantioselectivity on chirally modified Cu(110), Cu(100), and Cu(111) surfaces

Temperature programmed desorption methods have been used to probe the enantioselectivity of achiral Cu(100), Cu(110), and Cu(111) single crystal surfaces modified by chiral organic molecules including amino acids, alcohols, alkoxides, and amino-alcohols. The following combinations of chiral probes and chiral modifiers on Cu surfaces were included in this study: propylene oxide (PO) on L-alanine modified Cu(110), PO on L-alaninol modified Cu(111), PO on 2-butanol modified Cu(111), PO on 2-butoxide modified Cu(100), PO on 2-butoxide modified Cu(111), R-3-methylcyclohexanone (R-3-MCHO) on 2-butoxide modified Cu(100), and R-3-MCHO on 2-butoxide modified Cu(111). In contrast with the fact that these and other chiral probe/modifier systems have exhibited enantioselectivity on Pd(111) and Pt(111) surfaces, none of these probe/modifier/Cu systems exhibit enantioselectivity at either low or high modifier coverages. The nature of the underlying substrate plays a significant role in the mechanism of hydrogen-bonding interactions and could be critical to observing enantioselectivity. While hydrogen-bonding interactions between modifier and probe molecule are believed to induce enantioselectivity on Pd surfaces (Gao, F.; Wang, Y.; Burkholder, L.; Tysoe, W. T. J. Am. Chem. Soc. 2007, 129, 15240-15249), such critical interactions may be missing on Cu surfaces where hydrogen-bonding interactions are believed to occur between adjacent modifier molecules, enabling them to form clusters or islands.     

Racemic versus enantiopure alanine on Cu(110): an experimental study

The adsorption of racemic alanine on the Cu(110) surface has been compared to that of enantiopure alanine using low-energy electron diffraction (LEED), reflection absorption infrared spectroscopy (RAIRS), and scanning tunneling microscopy (STM). No evidence of chiral resolution at the surface was observed for the racemic system, indicating that the formation of separate enantiopure areas is not preferred. Also, in contrast to the enantiopure system, no chirally organized phase was observed for the racemic system. LEED shows that both systems display a common (3 x 2) phase at high coverage. However, the pathway and kinetic barriers to this phase differ markedly for the racemic and the enantiopure systems, with the racemic (3 x 2) appearing at a temperature that is more than 100 K below that required for the enantiopure system. In addition, we report intriguing complexities for the (3 x 2) LEED structure that is ubiquitous in amino acid/Cu(110) systems. First, a common (3 x 2) pattern with a zigzag distortion can be associated with both the racemic and enantiopure systems. For the racemic system, the coverage can be increased further to give a "true" (3 x 2) LEED pattern, which is a transformation that is impossible to enact for the enantiopure system. Most importantly, STM images of the "distorted" and "true" (3 x 2) structures created in the racemic system show subtle differences with neither arrangement being fully periodic over distances greater than a few molecules. Thus, the (3 x 2) phase appears to be more complicated than at first indicated and will require more complex models for a full interpretation.     

Localized reaction at a smooth metal surface: p-diiodobenzene at Cu(110)

Halogenation at a semiconductor surface follows simple dynamics characterized by "localized reaction" along the direction of the halide bond being broken. Here we extend the study of halide reaction dynamics to the important environment of a smooth metal surface, where greater product mobility would be expected. Extensive examination of the physisorbed reagent and chemisorbed products from two successive electron-induced reactions showed, surprisingly, that for this system product localization and directionality described the dynamics at a metal. The reagent was p-diiodobenzene on Cu(110) at 4.6 K. The first C-I bond-breaking yielded chemisorbed iodophenyl and I-atom(#1), and the second yielded phenylene and I-atom(#2). The observed collinear reaction resulted in secondary encounters among products, which revealed the existence of a surface-aligned reaction. The molecular dynamics were well explained by a model embodying a transition between an a priori ground state and a semiempirical ionic state, which can be generally applied to electron-induced chemical reactions at surfaces.