A Columnar Liquid‐Crystal Phase Formed by Hydrogen‐Bonded Perylene Bisimide J‐Aggregates

A new perylene bisimide (PBI) dye self‐assembles through hydrogen bonds and π–π interactions into J‐aggregates that in turn self‐organize into liquid‐crystalline (LC) columnar hexagonal domains. The PBI cores are organized with the transition dipole moments parallel to the columnar axis, which is an unprecedented structural organization in π‐conjugated columnar liquid crystals. Middle and wide‐angle X‐ray analyses reveal a helical structure consisting of three self‐assembled hydrogen‐bonded PBI strands that constitute a single column of the columnar hexagonal phase. This remarkable assembly mode for columnar liquid crystals may afford new anisotropic LC materials for applications in photonics.     

Discotic liquid-crystalline materials based on porphycenes: a mesogenic metalloporphycene-tetracyanoquinodimethane (TCNQ) adduct

A number of substituted zinc(II) porphycenes and porphyrins have been synthesized as potentially mesogenic materials. One of the resulting porphycenes, bearing eight decyloxy chains, exhibits two mesophases, a transient lamellar phase (Lam) and a highly ordered lamello-columnar phase (L(Col)), with remarkably different structural characteristics. The same zinc(II) porphycene also forms an electron donor-acceptor (EDA) complex with tetracyanoquinodimethane (TCNQ), generating a hexagonal columnar mesophase (Col(h)) that is thermally stable up to ca. 200 degrees C. The EDA interaction between porphycene and TCNQ has been probed using electronic and vibrational spectroscopy. A mixture of zinc(II) porphyrins, isomeric with the above porphycene complex, forms a rectangular columnar mesophase (Col(r)).     

Liquid crystalline bolaamphiphiles with semiperfluorinated lateral chains: competition between layerlike and honeycomb-like organization

Novel bolaamphiphilic triblockmolecules consisting of a rigid biphenyl unit, with a polar 2,3-dihydroxypropyloxy group and a phenolic OH group at opposite ends, as well as a semiperfluorinated chain in a lateral position have been synthesized via palladium catalyzed cross coupling reactions as the key steps. The thermotropic liquid crystalline behavior of these compounds was investigated by polarized light microscopy, DSC and X-ray scattering, and the influence of the length of the lateral chain on the mesomorphic properties was studied. The compound with the shortest chain as well as the long chain derivatives form lamellar mesophases composed of segregated layers of the bolaamphiphilic moieties and sublayers comprising the fluid lateral chains. The layers within the lamellar phases of the short chain compound adopt a positional correlation, leading to a 2D lattice (Col(r)/p2mm), whereas the layers of the lamellar phases of the long chain derivatives are noncorrelated (Lam). Compounds with a medium chain length organize into columnar phases, where the nonpolar lateral chains segregate into columns, which are embedded in networks of regular (Col(h)) or stretched (Col(r)/c2mm) hexagonal cylinder shells consisting of the bolaamphiphilic units. In total, an unusual phase sequence was found, where, with respect to the chain length, columnar mesophases occur between two mesophases with layer organization.     

An approach to helical tubular self-aggregation using C2-symmetric self-complementary hydrogen-bonding cavity molecules

In an approach to helical self-aggregation, C2-symmetric cavity compounds based on the fusion of the bicyclo[3.3.1]nonane and indole framework and incorporating two 2-pyridone hydrogen-bonding motifs, compounds (-)-4 (pyrrole N-butyl) and (-)-5 (pyrrole N-decyl), have been synthesized. The 2-pyridone AD-DA hydrogen-bonding motif failed to operate in the solid state as demonstrated by X-ray diffraction analysis of (-)-4. Instead, the hydrogen-bonded (D-A) chains ...O=C-N-H...O=C-N-H...O=C-N-H..., interconnecting columnar stacks, comprise helices of the right-handed (P) chirality motif. In solution, the aggregation of (-)-5 was studied by NMR, electronic, and CD spectroscopies, and VPO measurements. These investigations strongly suggest that (-)-5 associates to oligomers in CHCl3 and CH2Cl2 using the 2-pyridone motif, fitting the equal K model, and that pi-stacking can be ruled out as a mode of aggregation. We conclude that the so formed aggregates of (-)-5 have a helical structure, based on the fact that only helical tubular structures can result when enantiomerically pure 5 uses its 2-pyridone AD-DA hydrogen-bonding motifs for aggregation.     

Diversification of self-organized architectures in supramolecular dye assemblies

Upon complexation with bismelamine receptors (BMn) featuring different alkyl linker lengths (number of methylene groups (n) = 5-12), a barbituric acid merocyanine dye (1) can be loaded into diverse self-organized superstructures through multiple hydrogen-bonding interactions. UV/vis, dynamic light scattering, and NMR studies in cyclohexane demonstrate that the diversification of the primarily formed hydrogen-bonded species in solution occurs by varying the linker length of BMn. Hierarchical organization of the hydrogen-bonded species is achieved by slow evaporation of the solvent (forming solvent-free films), and the resulting superstructures are evaluated by polarized optical microscopy, X-ray diffraction, SEM, and AFM techniques. The formation of columnar structures with and without two-dimensional ordering are revealed for shorter (n = 5-7) and longer (n = 11, 12) linker bis(melamines), respectively. On the contrary, in the cases of n = 8-10, the formation of lamellar structures is unveiled. Several assemblies (n = 5, 7, 11) indicate the formation of a liquid crystalline mesophase in POM and DSC analyses. Hierarchical organization is also achieved in solution by prolonged aging, affording phase-separated crystalline nanofibers (n = 5, 7) and soft nanofibrils agglomerating into wormlike objects (n = 8), gel-forming continuous globular networks (n = 10), and nanofibers (n = 11, 12). These superstructural and morphological diversifications are an outcome of the variation in the primarily formed hydrogen-bonded supramolecular architectures. Using this strategy, diverse self-assembled materials will be obtained from a single dye component.     

Hierarchical organization of photoresponsive hydrogen-bonded rosettes

Hydrogen-bonded disk-shaped aggregates (rosettes) composed of azobenzene-appended melamine and barbiturate or cyanurate are investigated in view of their hierarchical organization and photoresponsive behavior by (1)H NMR and UV/vis spectroscopies, dynamic light scattering, and gelation behavior in aliphatic solvents and liquid crystalline behavior in bulk state. In the bulk state the rosette possessing a sterically bulky tridodecyloxyphenyl substituent in the barbiturate component stacks in an offset arrangement to form a rectangular columnar mesophase, whereas in aliphatic solvents it does not hierarchically organize into higher-order columnar aggregates. This drawback is improved by exchanging the barbiturate component into a more sterically nondemanding N-dodecylcyanurate component. The resulting new rosette stacks in a face-to-face arrangement to form a hexagonal columnar mesophase in the bulk state and hierarchically organizes into elongated fibrous aggregates in cyclohexane, which eventually leads to the formation of organogel. Dynamic light scattering and UV-vis experiments upon UV-irradiation of the columnar aggregates in cyclohexane revealed that the dissociation and the reformation of columnar aggregates can be controlled by the trans-cis isomerization of the azobenzene moiety. Molecular modeling indicates that the rosette possessing cis-azobenzene side chains loses its planarity. Using this photoinduced morphological change of the rosette, photoresponsive organogel is created by the use of a disk-shaped supramolecule the first time.     

Molecular engineering of supramolecular scaffold coatings that can reduce static platelet adhesion

Novel supramolecular coatings that make use of low-molecular weight ditopic monomers with guanine end groups are studied using fluid tapping AFM. These molecules assemble on highly oriented pyrolytic graphite (HOPG) from aqueous solutions to form nanosized banding structures whose sizes can be systematically tuned at the nanoscale by tailoring the molecular structure of the monomers. The nature of the self-assembly in these systems has been studied through a combination of the self-assembly of structural derivatives and molecular modeling. Furthermore, we introduce the concept of using these molecular assemblies as scaffolds to organize functional groups on the surface. As a first demonstration of this concept, scaffold monomers that contain a monomethyl triethyleneglycol branch were used to organize these "functional" units on a HOPG surface. These supramolecular grafted assemblies have been shown to be stable at biologically relevant temperatures and even have the ability to significantly reduce static platelet adhesion.     

Photoreversible supramolecular polymerisation and hierarchical organization of hydrogen-bonded supramolecular co-polymers composed of diarylethenes and oligothiophenes

Diarylethene 1 equipped with two monotopic melamine hydrogen-bonding sites and oligothiophene-functionalized ditopic cyanurate (OTCA) were mixed in a nonpolar solvent to form AA-BB-type supramolecular co-polymers (SCPs) bearing photoswitchable moieties in their main chains and extended π systems as side chains. UV/Vis, fluorescence, dynamic light scattering (DLS), TEM, and AFM studies revealed that the two functional co-monomers formed flexible quasi-one-dimensional SCPs in solution that hierarchically self-organized into helical nanofibers through H-aggregation of the oligothiophene side chains. Upon irradiating the SCPs with UV light, a transition occurred from the H-aggregated state to non-aggregated monomeric oligothiophene side chains, as shown by spectroscopic studies, which indicates the formation of small oligomeric species held together only by hydrogen-bonding interactions. TEM and AFM visualized unfolded fibrils corresponding to elongated single SCP chains formed upon removal of solvent. The helical nanofibers were regenerated upon irradiating the UV-irradiated solution with visible light. These results demonstrated that the supramolecular polymerisation followed by hierarchical organization can be effectively controlled by proper supramolecular designs using diarylethenes and π-conjugated oligomers.     

The serine-proline turn: a novel hydrogen-bonded template for designing peptidomimetics

Serine-Proline (SP) dipeptide motifs have been shown to form unique hydrogen-bonding patterns in protein crystal structures. Peptides were designed to mimic these patterns by forming the 6 + 10 and the 9 + 10 hydrogen-bonded rings. Factors that contribute to the formation of SP turns include controlling backbone flexibility and amino acid chirality along with creating a hydrophobic environment around the intramolecular hydrogen bonds.     

Stimuli-Responsive Self-Sorting Hybrid Hydrogen-Bonded/Metal-Coordinated Cage

The self-assembly of a unique molecular container is reported: a hybrid hydrogen-bonded/metal-coordinated cage where both hydrogen-bonding and metal-coordination form the crucial part of the topology. The hybrid cage was prepared combining hydrogen-bonded rosette motif and palladium(II)/platinum(II) coordination to a pyridine ligand. It was also shown that the hybrid cage could be prepared by integrative self-sorting from simple components. For the first time the genuine dual character of the hybrid cage was manifested as both self-assembling parts responded selectively to different stimuli (such as phosphine and cyanurate), which resulted in the disassembly of the cage.     

Steric control over hydrogen bonding in crystalline organic solids: a structural study of N,N'-dialkylthioureas

Hydrogen bonding in crystalline N,N'-dialkylthioureas was examined with the help of single-crystal X-ray diffraction, DFT calculations, and Cambridge Structural Database (CSD) analysis. A CSD survey indicated that unlike the related urea derivatives, which persistently self-assemble into one-dimensional hydrogen-bonded chains, the analogous thioureas can form two different hydrogen-bonding motifs in the solid state: chains, structurally similar with those found in ureas, and dimers, that further associate into hydrogen-bonded layers. The formation of one motif or another can be manipulated by the bulkiness of the organic substituents on the thiourea group, which provides a clear example of steric control over the hydrogen bonding arrangement in crystalline organic solids.     

Two novel quadruple hydrogen-bonding motifs: the formation of supramolecular polymers, vesicles, and organogels

Two new hydrazide-based quadruple hydrogen-bonding motifs are described. Dipodals based on these two motifs are revealed to form supramolecular polymers, which can further aggregate to form vesicles and/or organogels in hydrocarbons. The quadruple hydrogen-bonding motifs are characterized by the X-ray diffraction and (2D) ¹H NMR experiments, while the vesicles and organogels are evidenced by SEM, AFM, TEM, and fluorescent microscopy.     

Fluorescence staining and confocal laser scanning microscopy study of hydrogen-bonded poly(vinylpyrrolidone)/poly(acrylic acid) film

Poly(vinylpyrrolidone) (PVPON) and poly(acrylic acid) (PAA) were layer-by-layer (LBL) assembled to prepare the thin films based on hydrogen-bonding complexation. The hydrogen-bonded PVPON/PAA films were incubated in acidic, neutral and basic vapors separately. To study the morphologies after incubation, the films were stained by pH-sensitive fluorescent dyes using chemical and physical ways, and investigated with confocal laser scanning microscope (CLSM). The chemical way (labeling) was covalently linking fluoresceinamine (FAM) to some monomer units of PAA while the physical way was adsorbing rhodamine B (RB) molecules from dilute solution. Atomic force microscope (AFM) was combined with CLSM to find that after incubation in neutral or basic vapor the hydrogen-bonded PVPON/PAA films form porous structure and the pores are through the whole film.     

Photoconductive Core–Shell Liquid‐Crystals of a Perylene Bisimide J‐Aggregate Donor–Acceptor Dyad

A novel core–shell structured columnar liquid crystal composed of a donor‐acceptor dyad of tetraphenoxy perylene bisimide (PBI), decorated with four bithiophene units on the periphery, was synthesized. This molecule self‐assembles in solution into helical J‐aggregates guided by π–π interactions and hydrogen bonds which organize into a liquid‐crystalline (LC) columnar hexagonal domain in the solid state. Donor and acceptor moieties exhibit contrasting exciton coupling behavior with the PBIs’ (J‐type) transition dipole moment parallel and the bithiophene side arms’ (H‐type) perpendicular to the columnar axis. The dyad shows efficient energy and electron transfer in solution as well as in the solid state. The synergy of photoinduced electron transfer (PET) and charge transport along the narcissistically self‐assembled core–shell structure enables the implementation of the dye in two‐contact photoconductivity devices giving rise to a 20‐fold increased photoresponse compared to a reference dye without bithiophene donor moieties.     

Multiple hydrogen bonding induced self-assembly: transformation from nanofibrils to nanosphere with aromatic oligoamide incorporated polyethylene glycol

Aromatic oligoamides bearing six potential hydrogen-bonding sites were designed and synthesized. Functionalized with two polyethylene glycol (M_w?=?2000), this aromatic oligoamide could self-assemble via hydrogen bonds to form nanofibrils in nonpolar solvents as a result of aggregation. The resulting aggregates were characterized by scanning electron microscopy (SEM) and atomic force microscopy (AFM) and dynamic light scattering (DLS). Upon adding another aromatic oligoamide containing complementary hydrogen bond donors and acceptors, transformation from nanofibrils to nanosphere was observed due to formation of hydrogen-bonded duplex. The nanospherical micelle was corroborated by SEM, transmission electron microscopy (TEM) and AFM tests. The results achieved here demonstrate an alternative route to effect supramolecular structures via multiple hydrogen bonding-induced self-assembly process.     

Self-assembly of discotic mesogens in solution and in liquid crystalline phases: effects of substituent position and hydrogen bonding

The effects of functional group position on the phase behavior of discotic mesogens was examined for a series of dibenzophenazine derivatives bearing a carboxylic acid, methyl carboxylate, or nitro group. In all cases, changing the position of the group from the "top" to the "side" of the aromatic core led to dramatic differences in the phase behavior, both in terms of the stability of the liquid crystalline phases as well as the types of mesophases formed. For the non-hydrogen bonding ester and nitro derivatives, moving the substituent to the side of the core led to a lowering of the clearing temperatures or loss of liquid crystallinity. Carboxylic acid derivatives exhibit broad mesophases irrespective of the position of the acid group, but mesogens bearing this group on the side of the core exclusively form Col(h) phases, whereas those with an acid group on the top of the core exhibit more varied mesomorphism, with the formation of Col(h), Col(r), and nematic phases. Contrary to expectations, the presence of a carboxylic acid group on the side of the core does not appear to lead to the formation of dimeric structures in the liquid crystalline phase, although the columnar structures appear to be stabilized by intermolecular hydrogen bonding along the columns. These derivatives also form pi-stacked dimers in solution; the structure of these dimers are consistent with the proposed structure of the columnar phases.     

Alpha-helical-within-discotic columnar structures of a complex between poly(ethylene oxide)-block-poly(l-lysine) and a hexa-peri-hexabenzocoronene

Poly(ethylene oxide)-block-poly(l-lysine) (PEO-PLL) was complexed with an amphiphilic hexa-peri-hexabenzocoronene (HBC). This produced a thermotropic liquid crystalline material (PEO-PLL-HBC), which was investigated by FTIR spectroscopy and differential scanning calorimetry as well as by wide- and small-angle X-ray scattering. It was found that the poly(l-lysine) blocks form an alpha-helical secondary structure. Each helix is surrounded symmetrically by six discotic columns of HBC, which gives an alpha-helical-within-discotic column structural entity. The dense packing of these entities produces hexagonal sublattices (formed by the columns) in the frame of a two-dimensional hexagonal lattice (formed by the helices). An order-order transition from a columnar structure Col1 to Col2 was found at 54 degrees C. The unit cell constants are 5.75 nm (Col1) and 6.60 nm (Col2). The larger unit cell size of Col2 was explained by a higher intracolumnar order of the latter in which the packing distance of the disklike HBC cores is well-defined (0.353 nm). PEO-PLL-HBC combines essential features of liquid crystals with a basic structural element of proteins into a single material.     

Design and synthesis of a C2-symmetric self-complementary hydrogen-bonding cleft molecule based on the bicyclo[3.3.1]nonane and 4-oxo-5-azaindole framework. formation of channels and inclusion complexes in the solid state

The synthesis of a C2-symmetric cleft molecule 2 based on the fused framework between bicyclo[3.3.1]nonane and 4-oxo-5-azaindole, incorporating a self-complementary hydrogen-bonding motif, in both racemic and enantiomerically pure forms is reported. This cleft molecule is reminiscent of analogues of Tr?ger's base though with different cleft dimensions and tilt angles. The framework of 2 provides a building block for the construction of self-assembled hydrogen-bonded supramolecular structures. The solid-state structure of 2 is highly influenced by the limited solubility of (+/-)-2 and (-)-2. The solvents interact with the potential hydrogen-bonding motifs of (+/-)-2 and (-)-2, forming different three-dimensional structures as revealed by X-ray diffraction analysis. In the solid state (+/-)-(2)2 x 5DMF forms hydrogen-bonded pleated band structures that build up three-dimensional pens between adjacent bands in which two molecules of DMF are trapped. In contrast, the aggregate obtained from (-)-2, (-)-2 x 2AcOH, showed infinite bands of complex constitution.     

Silver Containing Nanostructures from Hydrogen-bonded Supramolecular Scaffolds

The self-organisation of silver-containing hydrogen-bonded rosette assemblies on highly oriented pyrolytic graphite (HOPG) surfaces is described. The introduction of silver atoms into the double rosette architecture was achieved using the affinity of silver cations for cooperative π-donors or cyano functionalities on the double rosettes. Highly ordered 2-D nanorod domains with an inter-row spacing of 4–5 nm oriented in different directions were revealed by tapping-mode atomic force microscopy (AFM). This new and simple strategy for the creation of metal-containing supramolecular nanorod arrays that can act as well-defined surface-immobilised self-assembled scaffolds, will contribute to the development of functionalised nanoarchitectures via bottom–up approaches.