Quantum chemical study on enantioselective reduction of aromatic ketones catalyzed by chiral cyclic sulfur‐containing oxazaborolidines. Part 3. Structures of catalyst–alkoxyborane adducts

The chiral cyclic sulfur‐containing oxazaborolidine catalyst reacts with aromatic ketone in the presence of borane to form the catalyst–alkoxyborane adduct with a B‐O‐B‐N four‐membered ring. The ab initio molecular orbital method is employed to study the structures of the catalyst–alkoxyborane adduct. All the calculated systems are optimized completely by means of the Hartree–Fock method at 6‐31g* basis sets. The B‐O‐B‐N four‐membered ring is stable, although there is strong tensile stress in the four‐membered ring. The catalyst–alkoxyborane adduct exists in four stable structures. Among these structures, the largest energy difference is only about 4 kJ/mol. In the catalyst–alkoxyborane adduct, the B(2) N(3) bond in the catalyst is weakened greatly. © 2000 John Wiley & Sons, Inc. Int J Quant Chem 78: 261–268, 2000     

Quantum chemical study on enantioselective reduction of keto oxime ether with borane catalyzed by oxazaborolidine. Part 3. Properties of intermediates during hydride transfer

In the current article, the structures and properties of intermediates during the hydride transfer for the prior coordination of the carbonyl oxygen of keto oxime ether at B(2) of oxazaborolidine are discussed. All the structures are optimized completely by means of the Hartree–Fock (HF) and the density functional methods at the HF/6‐31G(d) and Becke's three‐parameter exchange functional and the gradient‐corrected functional of Lee, Yang, and Paar (B3LYP)/6‐31G(d) levels. The hydride transfer from BH₃ to the carbonyl carbon in oxazaborolidine‐borane‐keto oxime ether adduct results in the formation of the adduct 4a* with a seven‐membered ring. This adduct has four stable structures. Another hydride of BH₂ transfers to the oxime carbon in 4a* , leading to the adduct 5a* , which has also four stable structures. Among all the structures of 5a* , the most stable structure can generate (1S, 2R)‐cis amino alcohol, which is in agreement with that obtained in the experiment. This enantioselective reduction may go through the process in which oxazaborolidine‐borane‐keto oxime ether adduct is directly transformed into the adduct 4a* with a seven‐membered ring. © 2003 Wiley Periodicals, Inc. Int J Quantum Chem 93: 307–316, 2003     

手性含硫恶唑硼烷催化芳酮不对称还原反应的量子化学研究

用HF方法在6-31G^*基组下,对手性含硫恶唑硼烷催化苯乙酮不对称还原反应进行了量子化学从头算研究。还原反应经历了催化剂-硼烷加合物、催化剂-硼烷-酮加合物、催化剂-烷氧基硼烷加合物的生成以及催化剂-烷氧基硼烷加合物的离解过程。催化剂-硼烷加合物、催化剂-硼烷-酮加合物和催化剂-烷氧基硼烷加合物的生成分别为放热、吸热、放热过程;催化剂-烷氧基硼烷加合物离解成催化剂烷氧基硼烷为吸热过程。催化剂-硼烷-酮加合物和催化剂-烷氧基硼烷加合物都存在四种稳定的结构。最有利于氢转移的催化剂-硼烷-酮加合物结构是次低能量结构,并且具有扭曲的船形结构。催化剂-烷氧基硼烷加合物含有一个B-O-B-N四元环,尽管四元环有较大的张力,但加合物仍有较高的稳定性。     

Quantum chemical study on enantioselective reduction of keto oxime ether with borane catalyzed by oxazaborolidine. Part 1. Structures of catalyst–borane–keto oxime ether adducts

In the present work, quantum chemical computations of the enantioselective reduction of keto oxime ether with borane catalyzed by chiral oxazaborolidine are performed by means of the Hartree–Fock and the density functional methods. The structures of oxazaborolidine, oxazaborolidine–borane adduct, and oxazaborolidine–borane–keto oxime ether adducts are optimized completely at the HF/6‐31g* and B3LYP/6‐31g* levels and their properties studied in detail. The oxazaborolidine catalyst is a twisted chair structure and reacts with borane at the nitrogen site of the catalyst to form the catalyst–borane adduct whose formation reaction is exothermic. The catalyst–borane adduct reacts easily with keto oxime ether to form catalyst–borane–keto oxime ether adducts that have eight stable structures. The coordination of the carbonyl oxygen in keto oxime ether at the boron site of the catalyst is of more advantage to the enantioselective reduction of keto oxime ether than the coordination of the oxime nitrogen in the keto oxime ether at the boron site is. © 2001 John Wiley & Sons, Inc. Int J Quant Chem 81: 291–304, 2001     

Ab inito Study on Enantioselective Reduction of Ketones Catalyzed by Thiazolidino[3,4—c]oxazaborolidines

The ab initio molecular orbital method is employed to study the enantioselective reduction of acetophenone with borane catalyzed by thiszolidino[3,4-c]oxazaborolidine.Computation result shows that the controlling step for the reduction is the decomposition of the catalyst-alkoxyborane adduct and the reduction leads to S-alcohols.The transition atate of the hydride transfer from the borane moiety to the carbonyl carbon of acetophenone is a twisted chair structure with a B(2)-N(3)-BBH3-HBH3-CCo-OCO6-membered ring.     

1,4,4‐Tri­methyl‐9‐phenyl‐8‐oxa‐9‐aza­bi­cyclo­[3.2.2]­non‐6‐en‐2‐one

The structure of the adduct of eucarvone with nitro­so­benzene, C₁₆H₁₉NO₂, is reported. The [3.2.2] bicyclic system corresponds to two seven‐membered rings in boat and distorted chair conformations and a six‐membered ring that adopts a distorted boat conformation. No conjugation is observed between the phenyl group and the N—O system. The packing is directed mainly by a C?O hydrogen bond, C—H?O‐(1 ? x, ?y, z) and by intermolecular C—H?π interactions.     

Di­cyano{[(1S)‐(1‐phenyl­ethyl)­aziridin‐2‐yl]­methano­lato‐κ2N,O}boron

In the title compound, C₁₃H₁₄BN₃O, the aziridine ring is an almost equilateral triangle, the C—C distance being slightly shorter than the C—N distances, probably because of the dative B—N bond. The five‐membered ring, composed of two C atoms and N, B and O atoms, is fused with the aziridine ring to form a six‐membered ring with a chair conformation.     

Room Temperature Ring Expansion of N‐Heterocyclic Carbenes and BB Bond Cleavage of Diboron(4) Compounds

We report the isolation and detailed structural characterization, by solid‐state and solution NMR spectroscopy, of the neutral mono‐ and bis‐NHC adducts of bis(catecholato)diboron (B₂cat₂). The bis‐NHC adduct undergoes thermally induced rearrangement, forming a six‐membered ‐B?C?N?C?C‐N‐heterocyclic ring via C?N bond cleavage and ring expansion of the NHC, whereas the mono‐NHC adduct is stable. Bis(neopentylglycolato)diboron (B₂neop₂) is much more reactive than B₂cat₂ giving a ring expanded product at room temperature, demonstrating that ring expansion of NHCs can be a very facile process with significant implications for their use in catalysis.     

Gold‐Catalyzed Ring Expansion of Alkynyl Heterocycles through 1,2‐Migration of an Endocyclic Carbon–Heteroatom Bond

A mild and efficient gold‐catalyzed oxidative ring‐expansion of a series of alkynyl heterocycles using pyridine‐N‐oxide as the oxidant has been developed, which affords highly valuable six‐ or seven‐membered heterocycles with wide functional group toleration. The reaction consists of a regioselective oxidation and a chemoselective migration of an endocyclic carbon–heteroatom bond (favored over C?H migration) with the order of migratory aptitude for carbon–heteroatom bonds being C?S>C?N>C?O. In the absence of an oxidant, polycyclic products are readily constructed through a ring‐expansion/Nazarov cyclization reaction sequence.     

Stereocomplementary Routes to Hydroxylated Nitrogen Heterocycles: Total Syntheses of Casuarine,Australine, and 7‐epi‐Australine

Addition of lithiated 1‐benzyloxyallene to a D ‐arabinose‐derived cyclic nitrone occurred with perfect diastereoselectivity furnishing a bicyclic 1,2‐oxazine derivative, which is an excellent precursor for pyrrolizidine alkaloids hydroxylated at C‐7 with optional configuration at this stereogenic center. Depending on the stage of the N? O bond cleavage and ring re‐closure, 7‐hydroxypyrrolizidines with 7R or 7S configuration were obtained, as a result of completely selective addition reactions occurring complementarily at the bottom or top face of the endocyclic C? C double bond in six‐ and five‐membered B rings, respectively. Applicability of these stereodivergent routes to obtain polyhydroxy pyrrolizidine alkaloids is demonstrated by the efficient syntheses of casuarine and australine as examples of the two classes of diversely configured 7‐hydroxypyrrolizidine alkaloids. An alternative synthesis of australine and two strategies for the preparation of 7‐epi‐australine are also reported, which demonstrate that the stereoselectivity of hydride reduction of an exocyclic C? O double bond is independent of the ring size, occurring preferentially from the top face either in a six‐ or five‐membered ring.     

Phosphoryl group differentiating α‐amino acids from β‐ and γ‐amino acids in prebiotic peptide formation

In recent years β‐amino acids have increased their importance enormously in defining secondary structures of β‐peptides. Interest in β‐amino acids raises the question: Why and how did nature choose α‐amino acids for the central role in life? In this article we present experimental results of MS and ³¹P NMR methods on the chemical behavior of N‐phosphorylated α‐alanine, β‐alanine, and γ‐amino butyric acid in different solvents. N‐Phosphoryl α‐alanine can self‐assemble to N‐phosphopeptides either in water or in organic solvents, while no assembly was observed for β‐ or γ‐amino acids. An intramolecular carboxylic–phosphoric mixed anhydride (IMCPA) is the key structure responsible for their chemical behaviors. Relative energies and solvent effects of three isomers of IMCPA derived from α‐alanine (2a–c), with five‐membered ring, and five isomers of IMCPA derived from β‐alanine (4a–e), with six‐membered ring, were calculated with density functional theory at the B3LYP/6‐31G** level. The lower relative energy (3.2 kcal/mol in water) of 2b and lower energy barrier for its formation (16.7 kcal/mol in water) are responsible for the peptide formation from N‐phosphoryl α‐alanine. Both experimental and theoretical studies indicate that the structural difference among α‐, β‐, and γ‐amino acids can be recognized by formation of IMCPA after N‐phosphorylation. © 2003 Wiley Periodicals, Inc. Int J Quantum Chem 94: 232–241, 2003     

Theoretical studies on the structures and isomerization of methylene lithium‐chlorosilylenoid H2CSiLiCl

The methylene lithium‐chlorosilylenoid H₂C?SiLiCl was studied with ab initio calculations at the G2(MP2) level. Its four equilibrium structures, p‐complex, three‐membered ring, σ complex and silene, and three isomerization transition states were located. The calculations show that the nonplanar p‐complex structure is the lowest in energy among four equilibrium structures of H₂C?SiLiCl and should be experimentally detectable. The silene and σ complex structures with high energies are unstable and easy to isomerize to the most stable p‐complex structure via three‐membered ring one. Also, the geometric characteristics and bonding properties of various structures were analyzed and discussed. © 2002 Wiley Periodicals, Inc. Int J Quantum Chem, 2002     

Extension of N‐Heteroacenes through a Four‐Membered Ring

The synthesis of novel π‐extended N‐heteroacenes, which have a large tetraazaacene subunit and a quinoxaline subunit connected through a four‐membered ring, is reported. They were studied with experimental and computational methods in comparison to the corresponding tetraazaacenes. As found from the DFT calculation, the four‐membered ring is a better linker than a five‐membered ring or a C?C single bond to extend N‐heteroacenes for a new design of n‐type semiconductors in terms of the spatial delocalization and energy level of LUMO as well as the reorganization energy. In solution‐processed thin film transistors, the π‐extended N‐heteroacenes are found to function as n‐type semiconductors with field effect mobility of up to 0.02 cm² V^?1 s^?1 under ambient conditions.     

4,4,6,6‐Tetra­chloro‐2,2‐(propyl­ene­dioxy­di‐o‐phenyl­enedi­imino)‐2λ5,4λ5,6λ5‐cyclotriphosphazene

The title compound, C₁₅H₁₆Cl₄N₅O₂P₃, is a cyclo­phosphazenic lariat (PNP‐pivot) ether with a spiro‐cyclic 12‐membered macrocyclic ligand containing two ether O and two N atoms; the phosphazene ring is nearly planar. In the macrocyclic ring, there is a four‐center (trifurcate) N—H⋯O/N—H⋯N hydrogen bond. The relative inner‐hole size of the macrocycle is estimated as approximately 0.95 Å.     

4,4,6,6‐Tetra­chloro‐2,2‐(ethyl­ene­di­oxy­di‐o‐phenyl­enedi­imino)‐2λ5,4λ5,6λ5‐cyclo­triphosphazene

The title ligand, C₁₄H₁₄Cl₄N₅O₂P₃, is a cyclo­phosphazene lariat (PNP pivot) ether with a spiro‐cyclic 11‐membered macrocyclic ring containing two ether O and two N atoms; the phosphazene ring is nearly planar. The macrocyclic ring contains a four‐centred (trifurcate) N—H⋯O/N—H⋯N hydrogen bond, and the relative inner‐hole size of the macrocycle is ∼1.14 Å in radius. The mol­ecules are linked about inversion centres by N—H⋯N hydrogen bonds into centrosymmetric dimers.     

2,2′‐Anhydro‐1‐(3′,5′‐di‐O‐acetyl‐β‐D‐arabinofuranosyl)uracil,a cyclouridine nucleoside with a C4′‐endo furanosyl conformation

2,2′‐Anhydro‐1‐(3′,5′‐di‐O‐acetyl‐β‐D‐arabinofuranosyl)uracil, C₁₃H₁₄N₂O₇, was obtained by refluxing 2′,3′‐O‐(methoxymethylene)uridine in acetic anhydride. The structure exhibits a nearly perfect C4′‐endo (⁴E) conformation. The best four‐atom plane of the five‐membered furanose ring is O—C—C—C, involving the C atoms of the fused five‐membered oxazolidine ring, and the torsion angle is only −0.4 (2)°. The oxazolidine ring is essentially coplanar with the six‐membered uracil ring [r.m.s. deviation = 0.012 (5) Å and dihedral angle = −3.2 (3)°]. The conformation at the exocyclic C—C bond is gauche–trans which is stabilized by various C—H...π and C—O...π interactions.     

NO migration from N‐methyl‐N‐nitrosobenzene‐sulfonamide to 3,6‐dibromocarbazole: Concerted or stepwise reaction path?

The NO migration from N‐methyl‐N‐nitrosobenzene‐sulfonamide to 3,6‐dibromocarbazole was proposed in a recent literature to follow a stepwise reaction path. However, the present density functional theory calculations at the MP2/6–31G(d,p)//B3LYP/6–31G(d,p) level show that this reaction exclusively proceeds via a concerted mechanism involving a four‐membered ring transition state. The calculated barrier is in good agreement with the experimental finding. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

(Z)‐2‐[(1‐Phenylsulfonyl‐1H‐indol‐3‐yl)methylene]‐1‐azabicyclo[2.2.2]octan‐3‐one semicarbazone

In crystals of the title compound, C₂₃H₂₃N₅O₃S, the indole system is planar and the phenyl ring of the phenylsulfonyl group makes a dihedral angle with the best plane of the indole system of 77.18 (4)°. The olefinic bond connecting the azabicyclic and indole systems has Z geometry. The geometry adopted by the C=O bond with respect to the N—N bond is trans. The O atom of the carbonyl group of each molecule is hydrogen bonded to the hydrazidic H atom of an adjacent molecule to form an eight‐membered‐ring dimeric structure.     

Ethyl 3‐amino‐6‐phenyl‐4‐tolylthieno[2,3‐b]pyridine‐2‐carboxylate

In the title compound, C₂₃H₂₀N₂O₂S, the central thieno­pyridine ring system is essentially planar, the dihedral angle between the planes of the two rings being 0.3 (2)°. The terminal ethyl carboxyl­ate group is twisted by 26.7 (3)° away from the central ring system. A short intramolecular hydrogen bond involving the amino N atom and the carbonyl O atom [N⋯O = 2.806 (4) Å] forms a pseudo‐six‐membered ring. Significant intermolecular C—H⋯N, C—H⋯O and C—H⋯π interactions contribute strongly to the stability of the structure, along with weak π–π‐stacking interactions.     

Inherent Conformational Preferences of Ac‐Gln‐Gln‐NHBn: Sidechain Hydrogen Bonding Supports a β‐Turn in the Gas Phase

Gas‐phase single‐conformation spectroscopy is used to study Ac‐Gln‐Gln‐NHBn in order to probe the interplay between sidechain hydrogen bonding and backbone conformational preferences. This small, amide‐rich peptide offers many possibilities for backbone–backbone, sidechain–backbone, and sidechain–sidechain interactions. The major conformer observed experimentally features a type‐I β‐turn with a canonical 10‐membered ring C=O—H?N hydrogen bond between backbone amide groups. In addition, the C=O group of each Gln sidechain participates in a seven‐membered ring hydrogen bond with the backbone NH of the same residue. Thus, sidechain hydrogen‐bonding potential is satisfied in a manner that is consistent with and stabilizes the β‐turn secondary structure. This turn‐forming propensity may be relevant to pathogenic amyloid formation by polyglutamine segments in human proteins.