rac‐1‐[(2‐Methoxyethyl)sulfanyl]‐2‐[(2‐methoxyethyl)sulfinyl]benzene and its PdCl2 complex

As an extension of recent findings on the recovery of palladium with dithioether extractants, single crystals of the chelating vicinal thioether sulfoxide ligand rac‐1‐[(2‐methoxyethyl)sulfanyl]‐2‐[(2‐methoxyethyl)sulfinyl]benzene, C₁₂H₁₈O₃S₂, (I), and its square‐planar dichloridopalladium complex, rac‐dichlorido{1‐[(2‐methoxyethyl)sulfanyl]‐2‐[(2‐methoxyethyl)sulfinyl]benzene‐κ²S,S′}palladium(II), [PdCl₂(C₁₂H₁₈O₃S₂)], (II), have been synthesized and their structures analysed. The molecular structure of (II) is the first ever characterized involving a dihalogenide–Pd^II complex in which the palladium is bonded to both a thioether and a sulfoxide functional group. The structural and stereochemical characteristics of the ligand are compared with those of the analogous dithioether compound [Traeger et al. (2012). Eur. J. Inorg. Chem. pp. 2341–2352]. The sulfinyl O atom suppresses the electron‐pushing and mesomeric effect of the S—C...;C—S unit in ligand (I), resulting in bond lengths significantly different than in the dithioether reference compound. In contrast, in complex (II), those bond lengths are nearly the same as in the analogous dithioether complex. As observed previously, there is an interaction between the central Pd^II atom and the O atom that is situated above the plane.     

2‐[(4‐Hydroxyphenyl)iminomethyl]­thiophene

The molecular structure of the title compound, C₁₁H₉NOS, has three planar moieties, two of which are rings, namely the hydroxy­phenyl and the thio­phene, with an angle of 20.76 (10)° between them. The crystal structure is stabilized by an O—H?N hydrogen bond and by C—H?O intermolecular interactions. The C?O intermolecular contact distance is 3.443 (2) Å.     

Weak hydrogen and halogen bonding in 4‐[(2,2‐difluoroethoxy)methyl]pyridinium iodide and 4‐[(3‐chloro‐2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium iodide

To enable a comparison between a C—H…X hydrogen bond and a halogen bond, the structures of two fluorous‐substituted pyridinium iodide salts have been determined. 4‐[(2,2‐Difluoroethoxy)methyl]pyridinium iodide, C₈H₁₀F₂NO⁺·I⁻, (1), has a –CH₂OCH₂CF₂H substituent at the para position of the pyridinium ring and 4‐[(3‐chloro‐2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium iodide, C₉H₉ClF₄NO⁺·I⁻, (2), has a –CH₂OCH₂CF₂CF₂Cl substituent at the para position of the pyridinium ring. In salt (1), the iodide anion is involved in one N—H…I and three C—H…I hydrogen bonds, which, together with C—H…F hydrogen bonds, link the cations and anions into a three‐dimensional network. For salt (2), the iodide anion is involved in one N—H…I hydrogen bond, two C—H…I hydrogen bonds and one C—Cl…I halogen bond; additional C—H…F and C—F…F interactions link the cations and anions into a three‐dimensional arrangement.     

The diastereoisomers 2‐[(S/R)‐2‐chloro‐3‐quinolyl]‐2‐[(R)‐1‐(4‐methoxyphenyl)ethylamino]acetonitrile at 100 K

In the structures of the two enantiopure diastereoisomers of the title compound, C₂₀H₁₈ClN₃O, which crystallize in different space groups, the molecules are very similar as far as bond distances and angles are concerned, but more substantial differences are observed in some torsion angles. The crystal structures of both molecules can be described as zigzag layers along the c axis. The packing is stabilized by hydrogen‐bond interactions of N—H...O, C—H...Cl and C—H...π types for 2‐[(R)‐2‐chloro‐3‐quinolyl]‐2‐[(R)‐1‐(4‐methoxyphenyl)ethylamino]acetonitrile, and of N—H...N, C—H...O and C—H...π types for 2‐[(S)‐2‐chloro‐3‐quinolyl]‐2‐[(R)‐1‐(4‐methoxyphenyl)ethylamino]acetonitrile, resulting in the formation of two‐ and three‐dimensional networks.     

Two isomorphous azastilbene derivatives: 1‐(2‐chlorobenzyl)‐4‐[(E)‐2‐(4‐hydroxyphenyl)ethenyl]pyridinium chloride and 1‐(2‐bromobenzyl)‐4‐[(E)‐2‐(4‐hydroxyphenyl)ethenyl]pyridinium bromide

The crystal structures of the two title (E)‐stilbazolium halogenates, C₂₀H₁₇ClNO⁺·Cl⁻ and C₂₀H₁₇BrNO⁺·Br⁻, are isomorphous, with an isostructurality index of 0.985. The azastyryl fragments are almost planar, with dihedral angles between the benzene and pyridine rings of ca 4.5°. The rings of the benzyl groups are, in turn, almost perpendicular to the azastyryl planes, with dihedral angles larger than 80°. The cations and anions are connected by O—H...X⁻ (X = halogen) hydrogen bonds. The halide anions are `sandwiched' between the charged pyridinium rings of neighbouring molecules, and weak C—H...O hydrogen bonds and C—H...X and C—H...π interactions also contribute to the crystal structures.     

Differently coloured polymorphs of 4‐[(2‐nitrophenyl)azo]phenol

The crystal structures of the brown–yellow and orange polymorphs of the title compound, 4‐[(2‐nitro­phenyl)­diazenyl]­phenol, C₁₂H₉N₃O₃, have been determined and their visible reflection spectra recorded. Both structures adopt a stacking arrangement with interstack hydrogen bonds. Ab initio and semi‐empirical (AM1 and INDO‐CISD) calculations were performed in order to rationalize the difference in colour. It can be attributed neither to the subtle distinctions in molecular geometry nor to the effect of intermolecular electrostatic interactions. The most probable origin of this difference is the mixing of intramolecular n π* and intermolecular charge‐transfer excitations.     

The cocrystal rac‐1‐[(N,4‐dimethylbenzenesulfonamido)methyl]‐2‐(diphenylphosphoryl)ferrocene–rac‐1‐[(N,4‐dimethylbenzenesulfonamido)methyl]‐2‐(diphenylphosphanyl)ferrocene (0.45/0.55)

As part of our interest in the synthesis and catalytic applications of chiral (diphenylphosphanyl)ferrocene ligands, we designed a number of P,N‐containing ligands for use in asymmetric transfer hydrogenation (ATH). During the synthetic procedure to obtain rac‐1‐[(N,4‐dimethylbenzenesulfonamido)methyl]‐2‐(diphenylphosphanyl)ferrocene, the title compound, [Fe(C₅H₅)(C₂₆H₂₅NO₂PS)]_0.55·[Fe(C₅H₅)(C₂₆H₂₅NO₃PS)]_0.45, was obtained as a by‐product. It is composed of a ferrocene group disubstituted by a partially oxidized diphenylphosphanyl group, as confirmed by ³¹P NMR analysis, and an (N,4‐dimethylbenzenesulfonamido)methyl substituent. Owing to the partially oxidized diphenylphosphanyl group, it is best to view the crystal as being composed of a mixture of non‐oxidized and oxidized phosphane, so it can be regarded as a cocrystal. It is also a racemate. To the best of our knowledge, the P=O distance [1.344 (4) Å] is the shortest observed for related (diphenylphosphoryl)ferrocene compounds. The packing is stabilized by weak C—H...O interactions, forming R₂²(10) hydrogen‐bonding motifs, which build up a chain along the c axis.     

Sulfonate salts of the therapeutic agent dapsone: 4‐[(4‐aminophenyl)sulfonyl]anilinium benzenesulfonate monohydrate and 4‐[(4‐aminophenyl)sulfonyl]anilinium methanesulfonate monohydrate

Dapsone, formerly used to treat leprosy, now has wider therapeutic applications. As is the case for many therapeutic agents, low aqueous solubility and high toxicity are the main problems associated with its use. Derivatization of its amino groups has been widely explored but shows no significant therapeutic improvements. Cocrystals have been prepared to understand not only its structural properties, but also its solubility and dissolution rate. Few salts of dapsone have been described. The title salts, C₁₂H₁₃N₂O₂S⁺·C₆H₅O₃S⁻·H₂O and C₁₂H₁₃N₂O₂S⁺·CH₃SO₃⁻·H₂O, crystallize as hydrates and both compounds exhibit the same space group (monoclinic, P2₁/n). The asymmetric unit of each salt consists of a 4‐[(4‐aminophenyl)sulfonyl]anilinium monocation, the corresponding sulfonate anion and a water molecule. The cation, anion and water molecule form hydrogen‐bonded networks through N—H…O=S, N—H…O_water and O_water—H…O=S hydrogen bonds. For both salts, the water molecules interact with one sulfonate anion and two anilinium cations. The benzenesulfonate salt forms a two‐dimensional network, while the hydrogen bonding within the methanesulfonate salt results in a three‐dimensional network.     

(E)‐2‐[(4‐Chlorophenyl)iminomethyl]‐5‐methoxyphenol and (E)‐2‐[(2‐chlorophenyl)iminomethyl]‐5‐methoxyphenol: X‐ray and DFT‐calculated structures

The crystal structures of the title 4‐chlorophenyl, (I), and 2‐chlorophenyl, (II), compounds, both C₁₄H₁₂ClNO₂, have been determined using X‐ray diffraction techniques and the molecular structures have also been optimized at the B3LYP/6‐31 G(d,p) level using density functional theory (DFT). The X‐ray study shows that the title compounds both have strong intramolecular O—H...N hydrogen bonds and that the crystal networks are primarily determined by weak C—H...π and van der Waals interactions. The strong intramolecular O—H...N hydrogen bond is evidence of the preference for the phenol–imine tautomeric form in the solid state. The IR spectra of the compounds were recorded experimentally and also calculated for comparison. The results from both the experiment and theoretical calculations are compared in this study.     

The zwitterionic structure of 2‐hydroxy‐4‐[(2‐hydroxybenzylidene)amino]benzoic acid

The title compound, C₁₄H₁₁NO₄, exists in the solid phase in the zwitterionic form, 2‐{[(4‐carboxy‐3‐hydroxyphenyl)iminiumyl]methyl}phenolate, with the H atom from the phenol group on the 2‐hydroxybenzylidene ring transferred to the imine N atom, resulting in a strong intramolecular N—H...O hydrogen bond between the iminium H atom and the phenolate O atom, forming a six‐membered hydrogen‐bonded ring. In addition, there is an intramolecular O—H...O hydrogen bond between the carboxylic acid group and the adjacent hydroxy group of the other ring, and an intermolecular C—H...O contact involving the phenol group and the C—H group adjacent to the imine bond, connecting the molecules into a two‐dimensional network in the (10) plane. π–π stacking interactions result in a three‐dimensional network. This study is important because it provides crystallographic evidence, supported by IR data, for the iminium zwitterionic form of Schiff bases.<!?tpb=12pt>     

(3R,4S)‐3‐Phenyl‐1‐[(R)‐1‐phenyl­ethyl]‐4‐[(R)‐1‐phenylethyliminomethyl]azetidin‐2‐one

The configuration of the chiral ring atoms of the title compound, C₂₆H₂₆N₂O, obtained in an enantioselective synthesis, has been established relative to the known R configuration of the α‐methyl­benzyl moieties. The crystal packing involves a two‐dimensional network of C—H?π interactions between the aromatic rings.     

4‐[(2‐Hydroxyethyl)iminomethyl]‐5‐hydroxymethyl‐2‐methylpyridin‐3‐ol

The title compound, C₁₀H₁₄N₂O₃, is a Schiff base which is derived from pyridoxal and represents, therefore, a vitamin B₆‐related compound. Molecules are linked into sheets by a combination of O—H...O and O—H...N hydrogen bonds.     

Anomeric effect and hydrogen‐bonded supramolecular motif in 5‐(3‐fluoro‐4‐methoxyphenyl)‐1‐[(3‐fluoro‐4‐methoxyphenyl)aminomethyl]‐1,3,5‐triazinane‐2‐thione

In the title compound, C₁₈H₂₀F₂N₄O₂S, the triazinane‐2‐thione ring adopts an envelope conformation, the ring substituents lie on the same side of the mean plane of the heterocyclic ring and the exo lp—N—C—N_triaz unit (lp is a lone pair and triaz is the triazinane ring) exhibits an antiperiplanar orientation, which is shown to be governed by strong anomeric effects. Molecules are linked into a complex three‐dimensional framework by a combination of two N—H...S hydrogen bonds, three C—H...F hydrogen bonds and a π–π stacking interaction.     

Hydrogen‐bonding controls the solid‐state and enantiomeric comformations of the amino alcohol ligand 2‐[(2‐hydroxyethyl)amino]cyclohexanol

The crystal structure of the title compound, C₈H₁₇NO₂, consists of (R,R) and (S,S) enantiomeric pairs packed in adjacent double layers which are characterized by centrosymmetric hydrogen‐bonded dimers, generated via N—H...O and O—H...O interactions, respectively. Intermolecular interactions, related to acceptor and donor molecule chirality, link the achiral double layers into tubular columns, which consist of a staggered hydrophilic inner core surrounded by a hydrophobic cycloalkyl outer surface and extend in the [011] direction.     

4,4′‐(Azinodimethylene)dipyridinium bis(tetrafluoroborate) and 4‐[(4‐pyridylmethylene)hydrazonomethyl]pyridinium perchlorate: two different hydrogen‐bonding motifs

In the crystal structures of the title compounds, C₁₂H₁₂N₄²⁺·2BF₄⁻, (I), and C₁₂H₁₁N₄⁺·ClO₄⁻, (II), respectively, infinite two‐ and one‐dimensional architectures are built up via N—H...F [in (I)] and conventional N—H...N [in (II)] hydrogen bonding. The N—N single bond in (I) lies on a crystallographic centre of symmetry; as a result, the two pyridinium rings are parallel. In (II), the pyridinium and pyridyl ring planes are inclined with a dihedral angle of 14.45 (3)°.     

Synthesis,structure and cytotoxicity of new 2‐[(3‐aminopropyl)dimethylsilyl]‐5‐furfural diethylacetals and 2‐[(3‐aminopropyl)dimethylsilyl]‐5‐phenylfurans

Novel 2‐[(3‐aminopropyl)dimethylsilyl]‐5‐furfural diethylacetals and 2‐[(3‐aminopropyl)di‐methylsilyl]‐5‐phenylfurans have been synthesized by a hydrosilylation reaction of aliphatic and heterocyclic N‐allylamines in the presence of the Speier's catalyst. The effects of the structure of the amine and nature of organic substituent at the furan ring on the cytotoxicity of the new compounds have been studied. Copyright © 2013 John Wiley & Sons, Ltd.     

Neutral 4‐phenyl‐1‐[phenyl(pyridin‐2‐yl)methylidene]semicarbazide and its salt forms with inorganic anions

Semicarbazones can exist in two tautomeric forms. In the solid state, they are found in the keto form. This work presents the synthesis, structures and spectroscopic characterization (IR and NMR spectroscopy) of four such compounds, namely the neutral molecule 4‐phenyl‐1‐[phenyl(pyridin‐2‐yl)methylidene]semicarbazide, C₁₉H₁₆N₄O, (I), abbreviated as HBzPyS, and three different hydrated salts, namely the chloride dihydrate, C₁₉H₁₇N₄O⁺·Cl^?·2H₂O, (II), the nitrate dihydrate, C₁₉H₁₇N₄O⁺·NO₃^?·2H₂O, (III), and the thiocyanate 2.5‐hydrate, C₁₉H₁₇N₄O⁺·SCN^?·2.5H₂O, (IV), of 2‐[phenyl({[(phenylcarbamoyl)amino]imino})methyl]pyridinium, abbreviated as [H₂BzPyS]⁺·X^?·nH₂O, with X = Cl^? and n = 2 for (II), X = NO₃^? and n = 2 for (III), and X = SCN^? and n = 2.5 for (IV), showing the influence of the anionic form in the intermolecular interactions. Water molecules and counter‐ions (chloride or nitrate) are involved in the formation of a two‐dimensional arrangement by the establishment of hydrogen bonds with the N—H groups of the cation, stabilizing the E isomers in the solid state. The neutral HBzPyS molecule crystallized as the E isomer due to the existence of weak π–π interactions between pairs of molecules. The calculated IR spectrum of the hydrated [H₂BzPyS]⁺ cation is in good agreement with the experimental results.     

1‐Benzoyl‐3‐[(2‐benzylsulfanyl)phenyl]thiourea

In the title compound, C₂₁H₁₈N₂OS₂, a strong intramolecular N—H...O hydrogen bond [N...O = 2.642 (3) Å] between the amide N atom and the benzoyl O atom forms an almost planar six‐membered ring in the central part of the molecule. In the crystal, molecules are packed through weak N—H...S interactions. Intra‐ and intermolecular hydrogen bonds and van der Waals interactions are the stabilizing forces for the crystal structure.     

1‐[(1‐Ethoxypropylidene)amino]‐2‐ethyl‐4‐(4‐hydroxybenzyl)imidazol‐5(4H)‐one

The racemic title compound, C₁₇H₂₃N₃O₃, isolated from the reaction of l ‐(−)‐tyrosine hydrazide with triethyl orthopropionate in the presence of a catalytic quantity of p‐toluenesulfonic acid (p‐TsOH), crystallizes with Z′ = 1 in a centrosymmetric monoclinic unit cell. The molecule contains two planar fragments, viz. the benzene and imidazole rings, linked by two C—C single bonds. The dihedral angle between the two planes is 59.54 (5)° and the molecule adopts a synclinal conformation. The HOMA (harmonic oscillator model of aromaticity) index, calculated for the benzene ring, demonstrates no substantial interaction between the two π‐electron delocalization regions in the molecule. In the crystal structure, there is an O—H...N hydrogen bond that links the molecules along the c axis.     

Weak hydrogen bonding and fluorous interactions in the chloride and bromide salts of 4‐[(2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium

Neutralization of 4‐[(2,2,3,3‐tetrafluoropropoxy)methyl]pyridine with hydrohalo acids HX (X = Cl and Br) yielded the pyridinium salts 4‐[(2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium chloride, C₉H₁₀F₄NO⁺·Cl⁻, (1), and 4‐[(2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium bromide, C₉H₁₀F₄NO⁺·Br⁻, (2), both carrying a fluorous side chain at the para position of the pyridinium ring. Single‐crystal X‐ray diffraction techniques revealed that (1) and (2) are isomorphous. The halide anions accept four hydrogen bonds from N—H, ortho‐C—H and CF₂—H groups. Two cations and two anions form a centrosymmetric dimeric building block, utilizing complimentary N—H…X …H—Csp ³ connections. These dimers are further crosslinked, utilizing another complimentary Csp ²—H…X …H—Csp ² connection. The pyridinium rings are π‐stacked, forming columns running parallel to the a axis that make angles of ca 44–45° with the normal to the pyridinium plane. There are also supramolecular C—H…F—C interactions, namely bifurcated C—H…F and bifurcated C—F…H interactions; additionally, one type II C—F…F—C halogen bond has been observed.