Aglairubine: Structure Revision of a Chemotaxonomically Interesting Bisamide in Aglaia (Meliaceae)

Summary.  The bisamide aglairubine was isolated from different Aglaia species. The original structure was revised on the basis of FDMS and 2D-NMR data. Since all isolates were obtained from species belonging to the section Amoora of the genus Aglaia, aglairubine might serve as a taxonomic marker. Received July 3, 2001. Accepted July 12, 2001     

Bis -( bis -(1,3-diaminopropane)-copper(II) Tetracyanonickellate(II)) Tetrahydrate: Preparation, Characterization, and Crystal Structure of a Novel Molecular Tetracyanonickellate

 [Cu(tn)₂Ni(CN)₄]₂ċ4H₂O and Cu(tn)₂Ni(CN)₄ (tn = 1,3-diaminopropane) were prepared and characterized. The hydrate is unstable on air and readily dehydrates to Cu(tn)₂Ni(CN)₄. Crystal structure analysis of the hydrate at 150 K revealed a novel tetranuclear molecular structure of the tetracyanonickellate. The building elements are two [Cu(tn)₂]²⁺ cations (coordination numbers of Cu: 5 and 6, respectively), two [Ni(CN)₄)²⁻ anions, and crystal water. The two cations are linked by one tetracyanonickellate anion via bridging cyano groups placed in cis positions. The second anion is bound weakly (Cu-N = 2.82 ?) via one μ₂-bridging cyano ligand. The tetranuclear molecules and pairs of solvate water molecules are linked by strong hydrogen bonds, thus forming infinite planes which are linked in the third dimension by considerably weaker hydrogen bonds.     

Reactions of N , N -Disubstituted 5-Arylmethylidene-2-amino-thiazol-4(5 H )-ones with CH Acids

 N,N-Disubstituted 5-arylmethylidene-2-aminothiazol-4(5H)-ones reacted with diethyl malonate, ethyl benzoylacetate, acetylacetone, or cyclopentadiene in refluxing toluene and in presence of powdered sodium to give the respective 5-arylmethylidene-2′-amino-2,5′-bithiazolylidene-4,4′-dione derivatives in moderate yields. 5-Benzylidene-2-morpholin-4-yl-2-thiazol-4(5H)-one reacted with malononitrile in toluene and in presence of powdered sodium under mild conditions to afford the 1:1 adduct, benzylmalononitrile, and 2-morpholin-4-yl-2-thiazol-4(5H)-one. However, similar treatment of 5-(4-methoxyphenylmethylidene)-2-morpholin-4-yl-2-thiazol-4(5H)-one with malononitrile yielded the 2,5′-bithiazolylidene-4,4′-dione derivative together with 4-methoxyphenylmethylidene malononitrile. Treatment of 5-benzylidene- and 5-(4-methoxyphenylmethylidene)-2-morpholin-4-yl-2-thiazol-4(5H)-ones with 3-phenyl-4-oxo-2-thioxo-1,3-thiazolidine in refluxing toluene and in presence of powdered sodium produced 5-arylmethylidene-3-phenyl-4-oxo-2-thioxo-1,3-thiazolidines in good yields. The structures of all products were deduced from microanalytical and spectroscopic data, mechanistic details are discussed.     

The Unusual Thermodynamic Stability Order of the First-series Transition Metal Complexes with N,N,N′-tri(2-pyridylmethyl)glycinamide and the Crystal Structure of the Nickel(II) Complex

A new pentadentate tripodal peptide ligand N,N,N′-tri(2-pyridylmethyl)glycinamide (L) has been synthesized. The crystal structure of its nickel(II) complex, [NiL(H₂O)] · 1.17ClO₄ · 0.17H₃O · 0.03H₂O (1), has been determined by X-ray diffraction. In the complex, the deprotonated ligand L acts in a pentadentate fashion and coordinates to the nickel(II) ion through five nitrogen atoms, while the sixth position is occupied by a water molecule. The units of the complex are connected as a 3D honeycomb network by intermolecular hydrogen bonds. The thermodynamic properties of the ligand L with the first-series transition metal ions Co(II), Ni(II), Cu(II) and Zn(II) have been investigated by potentiometric titration and the results show that the order of their stability constants does not conform to the Irving–Williams serial. The reason why the stability constants of the Cu(II) complex are unconventionally small is proposed.     

Bacterial Constituents CXIII Structure Revision of Several Pyoverdins Produced by Plant-Growth Promoting and Plant-Deleterious Pseudomonas Species

The structural revision on the basis of spectroscopic and degradation results of several pyoverdins from Pseudomonas spp. is reported. Siderotyping studies by the isoelectrofocusing technique and by ferri-pyoverdin uptake experiments had prompted a re-investigation of some structures proposed in the literature.     

Polymorphism and Pressure Driven Thermal Spin Crossover Phenomenon in [Fe( abpt )2(NC X )2] ( X =?S, and Se): Synthesis, Structure and Magnetic Properties

Summary.  The monomeric compounds [Fe(abpt)₂(NCX)₂] (X = S (1), Se (2) and abpt = 4-amino-3,5-bis(pyridin-2-yl)-1,2,4-triazole) have been synthesized and characterized. They crystallize in the monoclinic P2₁/n space group with a = 11.637(2) ?, b = 9.8021(14) ?, c = 12.9838(12) ?, β = 101.126(14)°, and Z = 2 for 1, and a = 11.601(2) ?, b = 9.6666(14) ?, c = 12.883(2) ?, β = 101.449(10)°, and Z = 2 for 2. The unit cell contains a pair mononuclear [Fe(abpt)₂(NCX)₂] units related by a center of symmetry. Each iron atom, located at a molecular inversion center, is in a distorted octahedral environment. Four of the six nitrogen atoms coordinated to the Fe(II) ion belong to the pyridine-N(1) and triazole-N(2) rings of two abpt ligands. The remaining trans positions are occupied by two nitrogen atoms, N(3), belonging to the two pseudo-halide ligands. The magnetic susceptibility measurements at ambient pressure have revealed that they are in the high-spin range in the 2 K–300 K temperature range. The pressure study has revealed that compound 1 remains in high-spin as pressure is increased up to 4.4 kbar, where an incomplete thermal spin crossover appears at around T _1/2 = 65 K. Quenching experiments at 4.4 kbar have shown that the incomplete character of the conversion is a consequence of slow kinetics. Relatively sharp spin transition takes place at T _1/2 = 106, 152 and 179 K, as pressure attains 5.6, 8.6 and 10.5 kbar, respectively. Corresponding author. E-mail: jose.a.real@uv.es Received June 12, 2002; accepted July 1, 2002     

Interaction of Dimethyltin(IV) with DNA Constituents

 The interaction of dimethyltin(IV) (DMT) with some selected DNA constituents was investigated potentiometrically. The stepwise formation constants of the complexes were determined, and the concentration distribution of the various complex species was evaluated as a function of pH. The effect of dioxane on the protonation constants of the ligands and the formation constants of dimethyltin(IV) complexes are discussed. The thermodynamic parameters Δ H° and ΔS° were calculated from the temperature dependence of the equilibrium constants.     

Isolation and Structure Elucidation of Iridoide and Coumarin Derivatives from Xeromphis nilotica (Rubiaceae)

 Besides a known coumarin derivative, scopoletin, the iridoids gardenoside, α- and β-gardiol were isolated for the first time from a Xeromphis species, namely Xeromphis nilotica. Their structures were established on the basis of their spectroscopic data.     

Anti-HIV Active Naphthyl Analogues of HEPT and DABO

 5-Isopropyl-6-naphthyl uracil and 5-isopropyl-6-naphthyl-2-thiouracil were alkylated to give N-1-(ethoxymethyl and methylthiomethyl) uracil and S²-cyclohexyl-thiouracil, respectively. 5-Ethyl-6-naphthyl uracil and 5-ethyl-6-naphthyl-2-thiouracil afforded N-1-(ethoxymethyl, methoxy-methyl, methylthiomethyl, acetoxyethoxy methyl and hydroxyethoxy methyl) uracil and S²-((2,2- diethoxyethyl), methoxycarbonylmethyl, ethoxycarbonylpropyl, methylthiomethyl, ethoxymethyl, methyl and cyclohexyl)-thiouracil upon alkylation.     

An ab initio Molecular Orbital Study of the Conformational Properties of all-( Z )-Cyclododeca-1,4,7,10-tetraene

 Ab initio HF/6-31G^* and MP2/6-31G^*//HF/6-31G^* methods were used to calculate the structure optimization and conformational interconversion pathways for all-(Z )-cyclododeca-1,4,7,10-tetraene. This compound adopts the symmetrical crown (C _4v) conformation. Ring inversion takes place via symmetrical intermediates, such as boat-chair (BC, C _s) and twist (C _2h) conformers and requires about 22.3 kJ · mol⁻¹. The calculated strain energies for BC and twist conformers are 5.9 and 13.5 kJ · mol⁻¹. The results of semiempirical AM1 calculations for structural parameters and relative energies of the important geometries of the title compound are in good agreement with the results of ab initio methods.     

Synthesis and Structure Investigations of Potential Sedative and Anticonvulsant Hydroxy- and Acetoxy- N -(3-oxobutyl)-pyrido[2,3- d ]pyridazinonesa

 Novel N-(3-oxobutyl)-hydroxy- and acetoxypyrido[2,3-d]pyridazinones were synthesized and tested in vivo for their sedative and anticonvulsant activity. The Michael-type reaction of quinolinic acid hydrazide and methyl vinyl ketone afforded a mixture of two isomers, 5-hydroxy-N ⁷-(3-oxobutyl)-pyrido[2,3-d]pyridazin-8(7H)-one and 8-hydroxy-N ⁶-(3-oxobutyl)-pyrido[2,3,-d]pyridazin-5-(6H)-one, in a ratio of 2:1 which were separated by crystallization. Subsequent acetylation of both isomers yielded the corresponding 5- and 8-acetoxy compounds. The structures of the compounds were proven and completely assigned on the basis of ¹H, ¹³C, ¹⁵N NMR, and 1D NOE difference spectra as well as 2D C,H-correlation experiments. Preliminary pharmacological tests showed low acute toxicity with a LD ₅₀ > 1000 mg/kg in the mouse and sedative activity for the title compounds. 5-Acetoxy-N ⁷- (3-oxobutyl)-pyrido[2,3-d]pyridazin-8(7H)-one displayed a borderline anticonvulsant activity in the metrazole test model.     

Synthesis and structural studies of (2 E ,3 E ,6 R ,9 E ,11 E )-6-isopropenyl-3,6,10-trimethyl-5,8-dioxa-4,9-diazadodeca-3,9-diene-2,11-dione dioxime, ligand and its Mono-, homo, and heterodinuclear copper(II)/nickel(II) complexes

This article describes the synthesis of a new (2E,3E,6R,9E,11E)-6-isopropenyl-3,6,10-trimethyl-5,8-dioxa-4,9-diazadodeca-3,9-diene-2,11-dione dioxime (H₂hmdm), and its mono-, homo, and heterodinuclear copper(II)/nickel(II) complexes. Elemental analyses, stoichiometric and spectroscopic data of the metal complexes indicated that the metal ions are coordinated to the oxime and imine nitrogen atoms (C=N). The Cu(H₂hmdm), molecule coordinates to the second copper(II) ion through the oximate oxygens to afford a binuclear structure doubly bridged by the oximate groups in the cis arrangement. In the dinuclear complexes, in which the first Cu^II ion was complexed with nitrogen atoms of the oxime and imine groups, the second Cu^II ion is ligated with the 1,10-phenanthroline nitrogen atoms. Ligand and its mononuclear copper(II), homo and heterodinuclear copper(II)–nickel(II) complexes of (H₂hmdm) were characterized by elemental analyses, magnetic moments, ¹H-n.m.r. and ¹³C-n.m.r., i.r., and mass spectral studies. The data support the proposed structure of H₂hmdm and its complexes.     

Replacement of Methoxy by tert -Butyl on a Naphthalene Residue: An Unexpected Reaction During a Snieckus ortho -Lithiation

 When 1-methoxy-2-naphthalene carboxylic acid diethylamide was reacted with tert-butyl lithium in presence of TMEDA and 3,5-dimethoxybenzaldehyde was subsequently added to the reaction mixture, (P, S/M, R)- and (P, R/M, S)-1-tert-butyl-3-((3,5-dimethoxyphenyl)-hydroxymethyl)-naphthalene-2-carboxylic acid diethylamide were formed instead of the corresponding 1-methoxy derivative. The diastereomeric relationship of the products is due to a sterically severely hindered rotation around the amide-aryl bond.     

Corrected Structure of Aglalactone Isolated from Aglaia elaeagnoidea (Meliaceae)

Summary.  The structure of aglalactone, a dihydrobenzofuranone from Aglaia elaeagnoidea, was revised on the basis of 2D NMR data and lanthanide induced shifts (LIS). Received June 29, 2000. Accepted July 11, 2000     

Corrected Structure of Aglalactone Isolated from Aglaia elaeagnoidea (Meliaceae)

 The structure of aglalactone, a dihydrobenzofuranone from Aglaia elaeagnoidea, was revised on the basis of 2D NMR data and lanthanide induced shifts (LIS).