Comparative study on the nonadditivity of methyl group in lithium bonding and hydrogen bonding

Quantum chemical calculations at the second‐order Moeller–Plesset (MP2) level with 6‐311++G(d,p) basis set have been performed on the lithium‐bonded and hydrogen‐bonded systems. The interaction energy, binding distance, bond length, and stretch frequency in these systems have been analyzed to study the nonadditivity of methyl group in the lithium bonding and hydrogen bonding. In the complexes involving with NH₃, the introduction of one methyl group into NH₃ molecule results in an increase of the strength of lithium bonding and hydrogen bonding. The insertion of two methyl groups into NH₃ molecule also leads to an increase of the hydrogen bonding strength but a decrease of the lithium bonding strength relative to that of the first methyl group. The addition of three methyl groups into NH₃ molecule causes the strongest hydrogen bonding and the weakest lithium bonding. Although the presence of methyl group has a different influence on the lithium bonding and hydrogen bonding, a negative nonadditivity of methyl group is found in both interactions. The effect of methyl group on the lithium bonding and hydrogen bonding has also been investigated with the natural bond orbital and atoms in molecule analyses. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2009     

Nonadditivity of methyl group in single‐electron hydrogen bond of methyl radical‐water complex

The nonadditivity of methyl group in the single‐electron hydrogen bond of the methyl radical‐water complex has been studied with quantum chemical calculations at the UMP2/6‐311++G(2df,2p) level. The bond lengths and interaction energies have been calculated in the four complexes: CH₃? H₂O, CH₃CH₂? H₂O, (CH₃)₂CH? H₂O, and (CH₃)₃C? H₂O. With regard to the radicals, tert‐butyl radical forms the strongest hydrogen bond, followed by iso‐propyl radical and then ethyl radical; methyl radical forms the weakest hydrogen bond. These properties exhibit an indication of nonadditivity of the methyl group in the single‐electron hydrogen bond. The degree of nonadditivity of the methyl group is generally proportional to the number of methyl group in the radical. The shortening of the C···H distance and increase of the binding energy in the (CH₃)₂CH? H₂O and (CH₃)₃C? H₂O complexes are less two and three times as much as those in the CH₃CH₂? H₂O complex, respectively. The result suggests that the nonadditivity among methyl groups is negative. Natural bond orbital (NBO) and atom in molecules (AIM) analyses also support such conclusions. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2009     

Computational studies of the structure and cation-anion interactions in 1-ethyl-3-methylimidazolium lactate ionic liquid

Quantum chemical calculations of the structures and cation-anion interaction of 1-ethyl-3-methylimidazolium lactate ([Emim][LAC]) ion pair at the B3LYP/6-31++G** theoretical level were performed. The relevant geometrical characteristics, energy properties, intermolecular H-bonds (H-bonds), and calculated IR vibrations with respect to isolated ions were systematically discussed. The natural bond orbital (NBO) and atoms in molecule (AIM) analyses were also employed to understand the nature of the interactions between cation and anion. The five most stable geometries were verified by analyzing the relative energies and interaction energies. It was found that the most of the C-H···O intermolecular H-bonds interactions in five stable conformers have some covalent character in nature. The elongation and red shift in IR spectrum of C-H bonds which involve in H-bonds is proved by electron transfers from the lone pairs of the carbonyl O atom of [LAC] to the C-H antibonding orbital of the [Emim]+. The interaction modes are more favorable when the carbonyl O atoms of [LAC] interact with the C2-H of the imidazolium ring and the C-H of the ethyl group through the formation of triple H-bonds.     

Theoretical study on ionic liquids based on DBUH+: Molecular engineering and hydrogen bond evaluation

The new generation of the ionic liquids (ILs) based on 1,8-diazobicylo [5,4,0] undec-7-ene (DBU) are applied as the solvent in organic reactions. In this work, by using a theoretical procedure, the most probable interactions between the ion pairs of DBUH⁺ based ILs, including 10 functionalized imidazole anions were investigated. For this purpose, the electrostatic potential surfaces were analyzed to detect the most probable interaction sites of DBUH⁺. On the basis of the obtained results, hydrogen bond formation between the anions and DBUH⁺ is influenced by the electronic effect of the substituted functional groups. This means that electron donating groups, such as phenyl has a stabilizing effect on the ion pairs, while electron-withdrawing groups, such as nitro, induces a destabilizing effect. These behaviors are described based on the interaction energy values (ΔE_int). To investigate the dispersion interaction effects in ILs formation, M06-2X-D3 functional was applied in energy analysis. The solvent reaction field was investigated by the polarizable continuum model in ethanol and chloroform as the solvent. The results showed that ethanol has a greater effect on the interaction energy of the ILs. Finally, to have a comprehensive understanding of the charge transfer effect on the stability of the studied ILs and to characterize the most probable interactions, natural bond orbital and quantum theory of atoms in molecules analyses were applied and the obtained results were analyzed.     

The effect of hydrogen bond acceptor properties of ionic liquids on their cellulose solubility

It is nowadays well-known that ionic liquids can dissolve cellulose. However, little systematic data has been published that shed light onto the influence of the ionic liquid structure on the dissolution of cellulose. We have conducted 1H NMR spectroscopy of ethanol in a large number of ionic liquids, and found an excellent correlation of the data obtained with the hydrogen acceptor properties (β-values). With this tool in hand, it is possible to distinguish between cellulose-dissolving and non-dissolving ionic liquids. A modulating effect of both, the anion of the non-dissolving ionic liquid and its cation was found in solubility studies with binary ionic liquid mixtures. The study was extended to other non-dissolving liquids, namely water and dimethylsulfoxide, and the effect of the cation was also investigated.     

Theoretical study of the Si–H group as potential hydrogen bond donor

The ability of the Si–H group as hydrogen bond (HB) donor has been studied theoretically. Most of the selected molecules include the Si–H group in a polar environment that could produce an electron deficiency on the hydrogen atom. In addition, analogous derivatives where the silicon atom has been replaced by a carbon atom have been considered. In all cases, ammonia has been used as HB acceptor. The calculations have been carried out at the MP2/6‐311++G** computational level. The electron density of the complexes has been characterized within the atoms in molecules (AIM) framework. A search in the Cambridge Structural Database (CSD) has been carried out to verify the existence of this kind of interactions in solid phase. The results of the theoretical study on these HB complexes between ammonia and the silicon derivatives provides long HB distances (2.4 to 3.2 Å) and small interaction energies (?2.4 to ?0.2 kcal/mol). In all cases, the HBs of the corresponding carbon analogs show shorter interaction distances corresponding to stronger complexes. The CSD search provides a small number of short interactions between Si and other heavy atoms in agreement with the small stabilizing energy of the Si–H?N HB and the lack of SiH bond in polar environment within the database. © 2002 John Wiley & Sons, Inc. Int J Quantum Chem, 2001     

An explanation of the unusual strength of the hydrogen bond in small water clusters

We seek to explain why the hydrogen bond possesses unusual strength in small water clusters that account for many of the complex behaviors of water. We have investigated and visualized the donation of covalent character from covalent (sigma) to hydrogen bonds by calculating the eigenvector coupling properties of quantum theory of atoms in molecules (QTAIM), stress tensor σ ( r ), and Ehrenfest Force F ( r ) on the F ( r ) molecular graph. The next-generation three-dimensional (3-D) bond-path framework sets are presented, and only the F ( r ) bond-path framework sets reproduce the earlier finding on the coupling between covalent (sigma) and hydrogen bonds that possess a degree of covalent character. Exploration of the bond-path between the covalent (sigma) and hydrogen bond's critical points provides an explanation for the previously obtained coupling results. The directional character of the covalent (sigma) and hydrogen bonds' 3-D bond-path framework sets for the F ( r ) explains differences found in the earlier results from QTAIM and the stress tensor σ ( r ).     

Correlations between bond lengths and stretching frequencies in the O—D...O hydrogen bridge and their consequences

Based on modern neutron diffraction data and the known empirical correlations between the geometric and spectroscopic parameters of hydrogen bonds, the analytical expression describing the relation between the O—D covalent and D...O hydrogen bond lengths in the O—D...O hydrogen bridge was obtained. The distribution functions of the interatomic and nearest intermolecular distances in heavy water were calculated from the Raman band shapes in the 10 to 90 °C temperature interval in the framework of the fluctuation theory of hydrogen bonding.     

Ab initio molecular dynamics studies of ionic dissolution and precipitation of sodium chloride and silver chloride in water clusters, NaCl(H2O)n and AgCl(H2O)n, n = 6, 10, and 14

An ab initio molecular dynamics method was used to compare the ionic dissolution of soluble sodium chloride (NaCl) in water clusters with the highly insoluble silver chloride (AgCl). The investigations focused on the solvation structures, dynamics, and energetics of the contact ion pair (CIP) and of the solvent-separated ion pair (SSIP) in NaCl(H(2)O)(n) and AgCl(H(2)O)(n) with cluster sizes of n = 6, 10 and 14. We found that the minimum cluster size required to stabilize the SSIP configuration in NaCl(H(2)O)(n) is temperature-dependent. For n = 6, both configurations are present as two distinct local minima on the free-energy profile at 100 K, whereas SSIP is unstable at 300 K. Both configurations, separated by a low barrier (<10 kJ mol(-1)), are identifiable on the free energy profiles of NaCl(H(2)O)(n) for n = 10 and 14 at 300 K, with the Na(+)/Cl(-) pairs being internally solvated in the water cluster and the SSIP configuration being slightly higher in energy (<5 kJ mol(-1)). In agreement with the low bulk solubility of AgCl, no SSIP minimum is observed on the free-energy profiles of finite AgCl(H(2)O)(n) clusters. The AgCl interaction is more covalent in nature, and is less affected by the water solvent. Unlike NaCl, AgCl is mainly solvated on the surface in finite water clusters, and ionic dissolution requires a significant reorganization of the solvent structure.     

Preparation of CO2 responsive wormlike micelles and the effect of hydrogen bond on the strength of the network

We first prepared two types of CO₂-responsive wormlike micelles based on N-butyldiethanolamine–sodium oleate (BDEA–NaOA) and N,N-diethyl butylamine–sodium oleate (DEBA–NaOA), respectively. And then, we compared the two different systems to investigate the effect of hydrogen bond on the properties of wormlike systems. The results of the pH and conductivity variation show that tertiary amine groups on BDEA and DEBA were ionized to quaternary ammonium salts after bubbling of CO₂ into the systems, which work with OA^? to form wormlike micelles based on electrostatic interaction. The results of rheological measurements exhibit that the viscosity and viscoelastic of the BDEA–NaOA were obviously superior to DEBA–NaOA. The dramatically difference of the two kind of wormlike micelles was due to the strong intermolecular hydrogen bond between the BDEA and NaOA. This indicates that the hydrogen bond could show great effect on the properties of the wormlike micelles. Finally, a reasonable mechanism was proposed based on the molecular structure, micelles assembly, and the intermolecular interactions.     

氢键对分子器件电学特性的影响

利用密度泛函理论和弹性散射格林函数方法,研究了被不同官能团取代后的联苯分子的电输运特性.计算结果表明,由于氢键的影响,使得分子的电子结构发生了变化,特别是对电子在分子结内的跃迁几率影响较大,从而直接影响了分子器件的伏安特性.     

乙炔与H2O分子之间的氢键结构与性质

采用B3LYP方法,在6-311++G水平上优化得到了H2O…C2H2氢键复合物的σ-n和H-π型两种稳定构型,并进行频率分析,讨论了相关自然键红外振动光谱的红移现象.采用NBO理论对σ-n和H-π氢键复合物形成过程中的电荷转移的类型进行了分析讨论.分子间的氢键相互作用能结果表明,σ-n型比H-π型氢键复合物更稳定.     

J(F,H), J(C,H) and J(H,H) couplings involving the individual methyl group protons in 1,2,3,4-tetrachloro-5,6,7,8-tetrafluoro-9-methyltriptycene. Evidence of blue-shifting hydrogen bond

1,2,3,4-tetrachloro-5,6,7,8-tetrafluoro-9-methyltriptycene was studied in NMR spectra at low temperatures where the methyl group dynamics is frozen. Values of 5J(19F,1H), 1J(13C,1H), and 2J(1H,1H) for the individual methyl protons were measured. They are in a fair agreement with the corresponding theoretical values calculated at a density functional theory (DFT) level. The 5J(19F,1H) couplings involve the peri-F nucleus and occur via the 'through space' mechanism. Both the natural bond orbital analysis (at a HF level) and the observed pattern of 1J(13C,1H) coupling values corroborate occurrence in this molecule of intramolecular, blue-shifting hydrogen bonds engaging the methyl hydrogens. The 'through space' 5J(19F,1H) couplings may indicate the routes of electron density transfers that escape detection by the natural bond analysis. A consideration of these effects can enrich the chemical intuition involving this specific sort of H-bonds.     

Opposing Electronic and Nuclear Quantum Effects on Hydrogen Bonds in H2O and D2O

The effect of extending the O−H bond length(s) in water on the hydrogen-bonding strength has been investigated using static ab initio molecular orbital calculations. The “polar flattening” effect that causes a slight σ-hole to form on hydrogen atoms is strengthened when the bond is stretched, so that the σ-hole becomes more positive and hydrogen bonding stronger. In opposition to this electronic effect, path-integral ab initio molecular-dynamics simulations show that the nuclear quantum effect weakens the hydrogen bond in the water dimer. Thus, static electronic effects strengthen the hydrogen bond in H₂O relative to D₂O, whereas nuclear quantum effects weaken it. These quantum fluctuations are stronger for the water dimer than in bulk water.     

Regular/abnormal variation in the strength and nature of the halogen bond between H2Te and the dihalogens: Prominent effect of methyl substituents

The halogen-bonded complexes between H₂Te/Me₂Te and the dihalogen molecules XY (XY = F₂, Cl₂, Br₂, I₂, ClF, ClBr, BrF, BrCl, BrI, IF, ICl, IBr) have been studied to investigate the dependence of its strength and nature on the halogen donor X and its adjoining atom Y, as well as the methyl groups in the electron donor. The interaction energy varies between −1.7 and − 43.5 kcal/mol, indicating that the Te atom in H₂Te/Me₂Te has a strong affinity for the dihalogen molecules. For the H₂Te-XY complex, the halogen bond is stronger for the heavier halogen donor X atom and the strong electron-withdrawing group Y. However, for Me₂Te-XY, the halogen bond is stronger for the lighter halogen donor X atom. The H₂Te/Me₂Te-F₂ complex has the largest interaction energy, although the σ-hole on F₂ is the smallest in magnitude. In most of the complexes, the electrostatic and polarization contributions to the binding strength are similar in magnitude. However, for H₂Te/Me₂Te-F₂, the polarization contribution is much larger than the electrostatic contribution, with a significant contribution from charge transfer.     

Spectroscopic evidence for a dinitrogen complex of gallium and estimation of the Ga-N2 bond strength

Matrix-isolation experiments were performed to study the interaction between Ga atoms and N2 by using Raman and UV/Vis spectroscopies for detection and analysis. It was revealed that a weak complex is formed, for which resonance Raman spectra were obtained. Several overtones were sighted, allowing a rough estimate of the Ga-N2 fragmentation energy to be made (approximately 19 kJ mol(-1)). The excitation profile obtained from the spectra at different laser wavelengths agrees with the UV/Vis spectrum and shows that the complex exhibits an electronic transition at around 410 nm. At the Ga atom, this transition can be described as a 2S<--2P or 2D<--2P excitation, which is red-shifted from its position for free Ga atoms (approximately 340 nm and 270 nm for 2S<--2P and 2D<--2P, respectively) as a result of N2 complexation. The effect of complexation involves, therefore, only slight stabilization of the 2P ground state but relatively strong stabilization of the excited (2)S state. Accordingly, for the Ga atom in its excited 2S state, the Ga-N2 bond energy can be estimated to be around 79 kJ mol(-1).     

Reactivity of the Indenyl Radical (C9H7) with Acetylene (C2H2) and Vinylacetylene (C4H4)

The reactions of the indenyl radicals with acetylene (C₂H₂) and vinylacetylene (C₄H₄) is studied in a hot chemical reactor coupled to synchrotron based vacuum ultraviolet ionization mass spectrometry. These experimental results are combined with theory to reveal that the resonantly stabilized and thermodynamically most stable 1-indenyl radical (C₉H₇^.) is always formed in the pyrolysis of 1-, 2-, 6-, and 7-bromoindenes at 1500 K. The 1-indenyl radical reacts with acetylene yielding 1-ethynylindene plus atomic hydrogen, rather than adding a second acetylene molecule and leading to ring closure and formation of fluorene as observed in other reaction mechanisms such as the hydrogen abstraction acetylene addition or hydrogen abstraction vinylacetylene addition pathways. While this reaction mechanism is analogous to the bimolecular reaction between the phenyl radical (C₆H₅^.) and acetylene forming phenylacetylene (C₆H₅CCH), the 1-indenyl+acetylene→1-ethynylindene+hydrogen reaction is highly endoergic (114 kJ mol⁻¹) and slow, contrary to the exoergic (−38 kJ mol⁻¹) and faster phenyl+acetylene→phenylacetylene+hydrogen reaction. In a similar manner, no ring closure leading to fluorene formation was observed in the reaction of 1-indenyl radical with vinylacetylene. These experimental results are explained through rate constant calculations based on theoretically derived potential energy surfaces.