Three-dimensional quantitative structure-property relationship (3D-QSPR) models for prediction of thermodynamic properties of polychlorinated biphenyls (PCBs): enthalpy of vaporization

Three-dimensional Quantitative Structure-Property Relationship (QSPR) models have been derived using Comparative Molecular Field Analysis (CoMFA) to correlate the vaporization enthalpies of a representative set of polychlorinated biphenyls (PCBs) at 298.15 K with their CoMFA-calculated physicochemical properties. Various alignment schemes, such as inertial, as is, and atom fit, were employed in this study. The CoMFA models were also developed using different partial charge formalisms, namely, electrostatic potential (ESP) charges and Gasteiger-Marsili (GM) charges. The most predictive model for vaporization enthalpy (Delta(vap)H(m)(298.15 K)), with atom fit alignment and Gasteiger-Marsili charges, yielded r2 values 0.852 (cross-validated) and 0.996 (conventional). The vaporization enthalpies of PCBs increased with the number of chlorine atoms and were found to be larger for the meta- and para-substituted isomers. This model was used to predict Delta(vap)H(m)(298.15 K) of the entire set of 209 PCB congeners.     

Three-dimensional quantitative structure-property relationship (3D-QSPR) models for prediction of thermodynamic properties of polychlorinated biphenyls (PCBs): enthalpies of fusion and their application to estimates of enthalpies of sublimation and aqueous solubilities

Comparative Molecular Field Analysis (CoMFA) has been used to develop three-dimensional quantitative structure-property relationship (3D-QSPR) models for the fusion enthalpy at the melting point (Delta(fus)H(m)(T(fus))) of a representative set of polychlorinated biphenyls (PCBs). Various alignment schemes, such as inertial, as is, atom fit, and field fit, were used in this study to evaluate the predictive capabilities of the models. The CoMFA models have also been derived using partial atomic charges calculated from the electrostatic potential (ESP) and Gasteiger-Marsili (GM) methods. The combination of atom fit alignment and GM charges yielded the greatest self-consistency (r(2) = 0.955) and internal predictive ability (r(cv)(2) = 0.783). This CoMFA model was used to predict Delta(fus)H(m)(T(fus)) of the entire set of 209 PCB congeners, including 193 PCB congeners for which experimental values are unavailable. The CoMFA-predicted values, combined with previous estimations of vaporization and sublimation enthalpies, were used to construct a thermodynamic cycle that validated the internal self-consistency of the predictions for these three thermodynamic properties. The CoMFA-predicted values of fusion enthalpy were also used to calculate aqueous solubilities of PCBs using Mobile Order and Disorder Theory. The agreement between calculated and experimental values of solubility at 298.15 K, characterized by a standard deviation of +/- 0.41 log units, demonstrates the utility of CoMFA-predicted values of fusion enthalpies to calculate aqueous solubilities of PCBs.     

Experimental and computational studies on the molecular energetics of chlorobenzophenones

The standard (p degrees = 0.1 MPa) molar enthalpies of formation, Delta(f)H(m)degrees, of crystalline 2-, 3- and 4-chlorobenzophenone and 4,4'-dichlorobenzophenone were derived from the standard molar energies of combustion, Delta(c)U(m)degrees, in oxygen, to yield CO(2)(g), N(2)(g), and HCl x 600H(2)O(l), at T = 298.15 K, measured by rotating bomb combustion calorimetry. The Calvet high-temperature vacuum sublimation technique was used to measure the enthalpy of sublimation, Delta(cr)(g)H(m)degrees, of the compound 2-chlorobenzophenone. For the other three compounds, the standard molar enthalpies of sublimation, at T = 298.15 K were derived by the Clausius-Clapeyron equation, from the temperature dependence of the vapor pressures of these compounds, measured by the Knudsen-effusion technique. From the values of Delta(f)H(m)degrees and Delta(cr)(g)H(m)degrees, the standard molar enthalpies of formation of all the compounds, in the gaseous phase, Delta(f)H(m)degrees (g), at T = 298.15 K, were derived. These values were also calculated by using the B3LYP/6-311+G(2d,2p)//B3LYP/6-31G(d) computational approach.     

Experimental and molecular dynamics simulation study of the sublimation energetics of cyclopentadienyltricarbonylmanganese (Cymantrene)

The standard molar enthalpy of sublimation of monoclinic cyclopentadienyltricarbonylmanganese, Mn(eta (5)-C 5H 5)(CO) 3, at 298.15 K, was determined as Delta sub H m (o)[Mn(eta (5)-C 5H 5)(CO) 3] = 75.97 +/- 0.37 kJ x mol (-1) from Knudsen effusion and Calvet-drop microcalorimetry measurements, thus considerably improving the very large inaccuracy (>10 kJ x mol (-1)) of the published data. The obtained value was used to assess the extension of the OPLS-based all-atom force field we previously developed for iron metallocenes to manganese organometallic compounds. The modified force field was able to reproduce the volumetric properties (density and unit-cell volume) of crystalline Mn(eta (5)-C 5H 5)(CO) 3 with a deviation of 0.6% and the experimentally determined enthalpy of sublimation with an accuracy of 1 kJ x mol (-1). The interaction (epsilon) and atomic-diameter (sigma) parameters of the Lennard-Jones (12-6) potential function used to calculate dispersion contributions within the framework of the force field were found to be transferable from iron to manganese.     

Energetics of the thermal dimerization of acenaphthylene to heptacyclene

The energetics of the thermal dimerization of acenaphthylene to give Z- or E-heptacyclene was investigated. The standard molar enthalpy of the formation of monoclinic Z- and E-heptacyclene isomers at 298.15 K was determined as Delta(f)H(m)o (E-C24H16, cr) = 269.3 +/- 5.6 kJ x mol(-1) and Delta(f)H(m)o (Z-C24H16, cr) = 317.7 +/- 5.6 kJ x mol(-1), respectively, by microcombustion calorimetry. The corresponding enthalpies of sublimation, Delta(sub)H(m)o (E-C24H16) = (149.0 +/- 3.1) kJ x mol(-1) and Delta(sub)H(m)o (Z-C24H16) = (128.5 +/- 2.3) kJ x mol(-1) were also obtained by Knudsen effusion and Calvet-drop microcalorimetry methods, leading to Delta(f)H(m)o (E-C24H16, g) = (418.3 +/- 6.4) kJ x mol(-1) and Delta(f)H(m)o (Z-C24H16, g) = (446.2 +/- 6.1) kJ x mol(-1), respectively. These results, in conjunction with the reported enthalpies of formation of solid and gaseous acenaphthylene, and the entropies of acenaphthylene and both hepatcyclene isomers obtained by the B3LYP/6-31G(d,p) method led to the conclusion that at 298.15 K the thermal dimerization of acenaphthylene is considerably exothermic and exergonic in the solid and gaseous states (although more favorable when the E isomer is the product), suggesting that the nonobservation of the reaction under these conditions is of kinetic nature. A full determination of the molecular and crystal structure of the E dimer by X-ray diffraction is reported for the first time. Finally, molecular dynamics computer simulations on acenaphthylene and the heptacyclene solids were carried out and the results discussed in light of the corresponding structural and Delta(sub)H(m)o data experimentally obtained.     

升华热量热计的建立和有机氯化物的蒸发热和升华热的测定

本文参照Wads设计的蒸发热量热计建立一升华热量热计。利用此升华热量热计和LKB8700蒸发热量热计, 测得如下化合物在298.15 K 时的蒸发焓和升华焓为: 化合物 升华焓(kJ mol~(-1)) 蒸发焓(kJmol~(-1))水 43.72±0.18正癸烷 51.21±0.25萘 73.26±0.921,2,3-三氯苯 75.14±0.751,2,4-三氯苯 55.06±0.501,3,5-三氯苯 72.68±0.50     

Energetics of hydroxybenzoic acids and of the corresponding carboxyphenoxyl radicals. Intramolecular hydrogen bonding in 2-hydroxybenzoic acid

The energetics of the phenolic O-H bond in the three hydroxybenzoic acid isomers and of the intramolecular hydrogen O-H- - -O-C bond in 2-hydroxybenzoic acid, 2-OHBA, were investigated by using a combination of experimental and theoretical methods. The standard molar enthalpies of formation of monoclinic 3- and 4-hydroxybenzoic acids, at 298.15 K, were determined as Delta(f)(3-OHBA, cr) = -593.9 +/- 2.0 kJ x mol(-1) and Delta(f)(4-OHBA, cr) = -597.2 +/- 1.4 kJ x mol(-1), by combustion calorimetry. Calvet drop-sublimation calorimetric measurements on monoclinic samples of 2-, 3-, and 4-OHBA, led to the following enthalpy of sublimation values at 298.15 K: Delta(sub)(2-OHBA) = 94.4 +/- 0.4 kJ x mol(-1), Delta(sub)(3-OHBA) = 118.3 +/- 1.1 kJ x mol(-1), and Delta(sub)(4-OHBA) = 117.0 +/- 0.5 kJ x mol(-1). From the obtained Delta(f)(cr) and Delta(sub) values and the previously reported enthalpy of formation of monoclinic 2-OHBA (-591.7 +/- 1.3 kJ x mol(-1)), it was possible to derive Delta(f)(2-OHBA, g) = -497.3 +/- 1.4 kJ x mol(-1), Delta(f)(3-OHBA, g) = -475.6 +/- 2.3 kJ x mol(-1), and Delta(f)(4-OHBA, cr) = -480.2 +/- 1.5 kJ x mol(-1). These values, together with the enthalpies of isodesmic and isogyric gas-phase reactions predicted by density functional theory (B3PW91/aug-cc-pVDZ, MPW1PW91/aug-cc-pVDZ, and MPW1PW91/aug-cc-pVTZ) and the CBS-QMPW1 methods, were used to derive the enthalpies of formation of the gaseous 2-, 3-, and 4-carboxyphenoxyl radicals as (2-HOOCC(6)H(4)O(*), g) = -322.5 +/- 3.0 kJ.mol(-1) Delta(f)(3-HOOCC(6)H(4)O(*), g) = -310.0 +/- 3.0 kJ x mol(-1), and Delta(f)(4-HOOCC(6)H(4)O(*), g) = -318.2 +/- 3.0 kJ x mol(-1). The O-H bond dissociation enthalpies in 2-OHBA, 3-OHBA, and 4-OHBA were 392.8 +/- 3.3, 383.6 +/- 3.8, and 380.0 +/- 3.4 kJ x mol(-1), respectively. Finally, by using the ortho-para method, it was found that the H- - -O intramolecular hydrogen bond in the 2-carboxyphenoxyl radical is 25.7 kJ x mol(-1), which is ca. 6-9 kJ x mol(-1) above the one estimated in its parent (2-OHBA), viz. 20.2 kJ x mol(-1) (theoretical) or 17.1 +/- 2.1 kJ x mol(-1) (experimental).     

Comparative computational and experimental study on the thermochemistry of the chloropyrimidines

The standard (p0 = 0.1 MPa) molar enthalpies of formation, Delta fH(0)(M), for liquid 2,4,6-trichloropyrimidine and for crystalline 2-chloropyrimidine, 2,4- and 4,6-dichloropyrimidine, and 2,4,5,6-tetrachloropyrimidine compounds were determined at T = 298.15 K by rotating-bomb combustion calorimetry. The standard molar enthalpies of vaporization or sublimation, Delta (g)(cr,l) H(0)(M), of these compounds at T = 298.15 K were determined by Calvet microcalorimetry. The experimental standard molar enthalpies of formation of those compounds, in the gaseous state, at T = 298.15 K, were thus obtained by combining these two sets of results. The latter values have been employed in the calibration of the computational procedure, which has been used to estimate the gas-phase enthalpies of formation for the other chloropyrimidines that were not possible to obtain in a pure form for the experimental study. It is found that the exchange-correlation functional based on the local spin density approximation (LSDA) seems to be a cheap choice for the estimation of enthalpies of formation for heterocycles containing nitrogen atoms; the well-known B3LYP hybrid method yields larger differences, with respect to the experimental values, for 2,4,6-tri- and 2,4,5,6-tetrachloropyrimidines.     

Thermochemistry and gas-phase ion energetics of 2-hydroxy-4-methoxy-benzophenone (oxybenzone)

We have investigated the thermochemistry and ion energetics of the oxybenzone (2-hydroxy-4-methoxy-benzophenone, C14H12O3, 1H) molecule. The following parameters have been determined for this species: gas-phase enthalpy for the of neutral molecule at 298.15K, (Delta(f)H0(m)(g) = -303.5 +/- 5.1 kJ x mol-1), the intrinsic (gas-phase) acidity (GA(1H) = 1402.1 +/- 8.4 kJ x mol-1), enthalpy of formation for the oxybenzone anion (Delta(f)H0(m)(1-,g) = -402.3 +/- 9.8 kJ x mol-1). We also have obtained the enthalpy of formation of, 4-hydroxy-4'-methoxybenzophenone (Delta(f)H0(m)(g) = -275.4 +/- 10 kJ x mol-1) and 3-methoxyphenol anion (Delta(f)H0(m)(C7H7O2-,g) = -317.7 +/- 8.7 kJ x mol-1). A reliable experimental estimation of enthalpy related to intramolecular hydrogen bonding in oxybenzone has also been obtained (30.1 +/- 6.3 kJ x mol-1) and compared with our theoretical calculations at the B3LYP/6-311++G** level of theory, by means of an isodesmic reaction scheme. In addition, heat capacities, temperature, and enthalpy of fusion have been determined for this molecule by differential scanning calorimetry.     

Strength of the Zn-N coordination bond in zinc porphyrins on the basis of experimental thermochemistry

The compound, 5,10,15,20-tetrakis(4-methoxyphenyl)porphine zinc(II) (ZnTMPP), was prepared, and its thermochemical properties were experimentally established. The standard molar energy of combustion (Delta(c)U degrees m) was determined from oxygen rotating-bomb combustion calorimetry experiments. The standard molar enthalpies of combustion (Delta(c)H degrees m) and formation (Delta(f)H degrees m) were derived. The enthalpy of sublimation (Delta(cr)(g)H degrees m) was determined by Knudsen effusion at high temperatures. With these results, the standard molar enthalpies of formation and atomization (Delta(at)H degrees m) in the gas state were calculated. A summary of the results at T = 298.15 K (p degrees = 0.1 MPa) is shown in Table 1. Using these results and those previously obtained for the free ligand, 5,10,15,20-tetrakis(4-methoxyphenyl)porphine, the mean dissociation enthalpy for the Zn-N coordination bond is obtained as D(Zn-N) = (160 +/- 9) kJ.mol-1. This value is consistent with the results obtained using the same experimental approach in a similar system (5,10,15,20-tetraphenylporphine, TPP/ZnTPP) reported elsewhere. A discussion of the strength for the Zn-N coordination bond is made in terms of the structural and electronic features of the molecules involved.     

Dissociation dynamics and thermochemistry of tin species, (CH3)4Sn and (CH3)6Sn2, by threshold photoelectron-photoion coincidence spectroscopy

The dissociative photoionization of tetramethyltin (Me?Sn) and hexamethylditin (Me?Sn?) has been investigated by threshold photoelectron-photoion coincidence (TPEPICO). Ions are energy-selected, and their 0 K dissociation onsets are measured by monitoring the mass spectra as a function of ion internal energy. Me?Sn(+) dissociates rapidly by methyl loss, with a 0 K onset of E? = 9.382 ± 0.020 eV. The hexamethylditin ion dissociates slowly on the time scale of the experiment (i.e., during the 40 μs flight time to the detector) so that dissociation rate constants are measured as a function of the ion energy. RRKM and the simplified statistical adiabatic channel model (SSACM) are used to extrapolate the measured rate constants for methyl and Me?Sn(?) loss to their 0 K dissociation onsets, which were found to be 8.986 ± 0.050 and 9.153 ± 0.075 eV, respectively. Updated values for the heats of formation of the neutral Me?Sn and Me?Sn? are used to derive the following 298.15 K gas-phase standard heats of formation, in kJ·mol?1: Δ(f)H(m)(o)(Me?Sn(+),g) = 746.3 ± 2.9; Δ(f)H(m)(o)(Me?Sn?(+),g) = 705.1 ± 7.5; Δ(f)H(m)(o)(Me?Sn(?),g) = 116.6 ± 9.7; Δ(f)H(m)(o)(Me?Sn,g) = 123.0 ± 16.5; Δ(f)H(m)(o)(MeSn(+),g) = 877.8 ± 16.4. These energetic values also lead to the following 298.15 K bond dissociation enthalpies, in kJ·mol?1: BDE(Me?Sn-Me) = 284.1 ± 9.9; BDE(Me?Sn-SnMe?) = 252.6 ± 14.8.     

The aromaticity of pyracylene: an experimental and computational study of the energetics of the hydrogenation of acenaphthylene and pyracylene

In this work, the aromaticity of pyracylene (2) was investigated from an energetic point of view. The standard enthalpy of hydrogenation of acenaphthylene (1) to acenaphthene (3) at 298.15 K was determined to be minus sign(114.5 +/- 4.2) kJ x mol(-1) in toluene solution and minus sign(107.9 +/- 4.2) kJ x mol(-1) in the gas phase, by combining results of combustion and reaction-solution calorimetry. A direct calorimetric measurement of the standard enthalpy of hydrogenation of pyracylene (2) to pyracene (4) in toluene at 298.15 K gave -(249.9 plus minus 4.6) kJ x mol(-1). The corresponding enthalpy of hydrogenation in the gas phase, computed from the Delta(f)H(o)m(cr) and DeltaH(o)m(sub) values obtained in this work for 2 and 4, was -(236.0 +/- 7.0) kJ x mol(-1). Molecular mechanics calculations (MM3) led to Delta(hyd)H(o)m(1,g) = -110.9 kJ x mol(-1) and Delta(hyd)H(o)m(2,g) = -249.3 kJ x mol(-1) at 298.15 K. Density functional theory calculations [B3LYP/6-311+G(3d,2p)//B3LYP/6-31G(d)] provided Delta(hyd)H(o)m(2,g) = -(244.6 +/- 8.9) kJ x mol(-1) at 298.15 K. The results are put in perspective with discussions concerning the "aromaticity" of pyracylene. It is concluded that, on energetic grounds, pyracylene is a borderline case in terms of aromaticity/antiaromaticity character.     

CoMFA modeling of enzyme kinetics: K(m) values for sulfation of diverse phenolic substrates by human catecholamine sulfotransferase SULT1A3

Three-dimensional QSAR models were developed for predicting kinetic Michaelis constant (K(m)) values for phenolic substrates of human catecholamine sulfating sulfotransferase (SULT1A3). The K(m) values were correlated to the steric and electronic molecular fields of the substrates utilizing Comparative Molecular Field Analysis (CoMFA). The evaluated SULT1A3 substrate data set consisted of 95 different substituted phenols, catechols, catecholamines, steroids, and related structures for which the K(m) values were available. The data set was divided in three different subgroups in the initial analysis: (1). for the first CoMFA model substrates with only one reacting hydroxyl group were selected (n = 51), (2).the second model was build with structurally rigid substrates (n = 59), and (3). finally all substrates of the data set were included in the analysis (n = 95). Substrate molecules were aligned using the aromatic ring and the reacting hydroxyl group as a template. After the initial analysis different substrate alignment rules based on the existing knowledge of the SULT1A3 active site structure were evaluated. After this optimization a final CoMFA model was built including all 95 substrates of the data set. Cross-validated q(2) values (leave-one-out and leave-n-out) and coefficient contour maps were calculated for all derived CoMFA models. All four CoMFA models were statistically significant with q(2) values up to 0.624. These predictive QSAR models will provide us information about the factors that affect substrate binding at the active site of human catecholamine sulfotransferase SULT1A3.     

Spectroscopic and theoretical studies on axial coordination of bis(pyrrol-2-ylmethyleneamine)phenyl complexes

Metal (M=Zn(II), Ni(II), Cu(II)) complexes with tetradentate Schiff base ligand, bis(pyrrol-2-ylmethyleneamine)phenyl, has been synthesized and characterized by elemental analyses, (1)H NMR, mass spectra and UV-vis spectra. The standard association constants (K(theta)) and the thermodynamic parameters (Delta(r)H(m)(theta),Delta(r)S(m)(theta),Delta(r)G(m)(theta)) for axial coordination of imidazole derivatives with these Shiff base complexes were measured with UV-vis spectrophotometric titration. The decrease of enthalpy is found to be the drive of the axial coordination. Our Schiff base complexes can incorporate two axial ligands, except 2-Et-4-MeIm with two big substituents of great steric bulk according to stoichiometry of 1:1. ZnL displays high selectively binding to imidazole due to the steric bulk effect. Supporting density functional theory (DFT) calculations have been undertaken on B3LYP/6-31G(d) level.     

Increasing stability of the fullerenes with the number of carbon atoms: the experimental evidence

The values of the molar standard enthalpies of formation, Delta(f)H(o)(m)(C(76), cr) = (2705.6 +/- 37.7) kJ x mol(-1), Delta(f)H(o)(m)(C(78), cr) = (2766.5 +/- 36.7) kJ x mol(-1), and Delta(f)H(o)(m)(C(84), cr) = (2826.6 +/- 42.6) kJ x mol(-1), were determined from the energies of combustion, measured by microcombustion calorimetry on a high-purity sample of the D(2) isomer of fullerene C(76), as well as on a mixture of the two most abundant constitutional isomers of C(78) (C(2nu)-C(78) and D(3)-C(78)) and C(84) (D(2)-C(84), and D(2d)-C(84). These values, combined with the published data on the enthalpies of sublimation of each cluster, lead to the gas-phase enthalpies of formation, Delta(f)H(o)(m)(C(76), g) = (2911.6 +/- 37.9) kJ x mol(-1); Delta(f)H(o)(m)(C(78), g) = (2979.3 +/- 37.2) kJ x mol(-1), and Delta(f)H(o)(m)(C(84), (g)) = (3051.6 +/- 43.0) kJ x mol(-1), results that were found to compare well with those reported from density functional theory calculations. Values of enthalpies of atomization, strain energies, and the average C-C bond energy were also derived for each fullerene. A decreasing trend in the gas-phase enthalpy of formation and strain energy per carbon atom as the size of the cluster increases is found. This is the first experimental evidence that these fullerenes become more stable as they become larger. The derived experimental average C-C bond energy E(C-C) = 461.04 kJ x mol(-1) for fullerenes is close to the average bond energy E(C-C) = 462.8 kJ x mol(-1) for polycyclic aromatic hydrocarbons (PAHs).     

Experimental and computational investigation of the thermochemistry of the six isomers of dichloroaniline

The standard (p(o) = 0.1 MPa) molar enthalpies of formation of 2,3-, 2,4-, 2,5-, 2,6-, 3,4- and 3,5-dichloroanilines were derived from the standard molar energies of combustion, in oxygen, to yield CO(2)(g), N(2)(g) and HCl.600H(2)O(l), at T = 298.15 K, measured by rotating bomb combustion calorimetry. The Calvet high-temperature vacuum sublimation technique was used to measure the enthalpies of sublimation of the six isomers. These two thermodynamic parameters yielded the standard molar enthalpies of formation of the six isomers of dichloroaniline, in the gaseous phase, at T = 298.15 K. The gas-phase enthalpies of formation were also estimated by G3MP2B3 calculations, which were further extended to the computation of gas-phase acidities, proton affinities, and ionization enthalpies.     

Various atomic charge calculation schemes of CoMFA on HIF‐1 inhibitors of moracin analogs

Selection of appropriate partial charges in a molecule is crucial to derive good quantitative structure–activity relationship models. In this work, several partial atomic charges were assigned and tested in a comparative molecular field analysis (CoMFA) models. Many CoMFA models were generated for a series of hypoxia inducible factor 1 (HIF‐1) inhibitors using various partial atomic charges including charge equalization, Mülliken population analysis (MPA), natural population analysis, and electrostatic potential (ESP)‐derived charges. These atomic charges were investigated at various theoretical levels such as empirical, semiempirical, Hartree–Fock (HF), and density functional theory (DFT). Among them, Merz‐Singh‐Kollman (MK) ESP‐derived charges at the level of HF/6‐31G* gave the highest predictive q² with experimental pIC₅₀ values. With this charge scheme, a detailed analysis of CoMFA model was performed to understand the electrostatic interactions between ligand and receptor. More elaborate charge calculation schemes such as HF and DFT correlated more strongly with activity than empirical or semiempirical schemes. The choice of optimization methods was important. As geometries were fully optimized at the given levels of theory, the aligned structures were different. They differed considerably, especially for the flexible parts. This was likely the source of the substantial variation of q² values, even when the same steric factor was considered without electrostatic parameters. ESP‐derived charges were most appropriate to describe CoMFA electrostatic interactions among MPA, NBA, and ESP charges. Overall q² values vary considerably (0.8–0.5) depending on the charge schemes applied. The results demonstrate the need to consider more appropriate atomic charges rather than default CoMFA charges. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2012     

Energetics of cresols and of methylphenoxyl radicals

Combustion calorimetry studies were used to determine the standard molar enthalpies of formation of o-, m-, and p-cresols, at 298.15 K, in the condensed state as Delta(f)H(m) degrees (o-CH(3)C(6)H(4)OH,cr) = -204.2 +/- 2.7 kJ.mol(-1), Delta(f)H(m) degrees (m-CH(3)C(6)H(4)OH,l) = -196.6 +/- 2.1 kJ.mol(-1), and Delta(f)H(m) degrees (p-CH(3)C(6)H(4)OH,cr) = -202.2 +/- 3.0 kJ.mol(-1). Calvet drop calorimetric measurements led to the following enthalpy of sublimation and vaporization values at 298.15 K: Delta(sub)H(m) degrees (o-CH(3)C(6)H(4)OH) = 73.74 +/- 0.46 kJ.mol(-1), Delta(vap)H(m) degrees (m-CH(3)C(6)H(4)OH) = 64.96 +/- 0.69 kJ.mol(-1), and Delta(sub)H(m) degrees (p-CH(3)C(6)H(4)OH) = 73.13 +/- 0.56 kJ.mol(-1). From the obtained Delta(f)H(m) degrees (l/cr) and Delta(vap)H(m) degrees /Delta(sub)H(m) degrees values, it was possible to derive Delta(f)H(m) degrees (o-CH(3)C(6)H(4)OH,g) = -130.5 +/- 2.7 kJ.mol(-1), Delta(f)H(m) degrees (m-CH(3)C(6)H(4)OH,g) = -131.6 +/- 2.2 kJ.mol(-1), and Delta(f)H(m) degrees (p-CH(3)C(6)H(4)OH,g) = -129.1 +/- 3.1 kJ.mol(-1). These values, together with the enthalpies of isodesmic and isogyric gas-phase reactions predicted by the B3LYP/cc-pVDZ, B3LYP/cc-pVTZ, B3P86/cc-pVDZ, B3P86/cc-pVTZ, MPW1PW91/cc-pVTZ, CBS-QB3, and CCSD/cc-pVDZ//B3LYP/cc-pVTZ methods, were used to obtain the differences between the enthalpy of formation of the phenoxyl radical and the enthalpies of formation of the three methylphenoxyl radicals: Delta(f)H(m) degrees (C(6)H(5)O*,g) - Delta(f)H(m) degrees (o-CH(3)C(6)H(4)O*,g) = 42.2 +/- 2.8 kJ.mol(-1), Delta(f)H(m) degrees (C(6)H(5)O*,g) - Delta(f)H(m) degrees (m-CH(3)C(6)H(4)O*,g) = 36.1 +/- 2.4 kJ.mol(-1), and Delta(f)H(m) degrees (C(6)H(5)O*,g) - Delta(f)H(m) degrees (p-CH(3)C(6)H(4)O*,g) = 38.6 +/- 3.2 kJ.mol(-1). The corresponding differences in O-H bond dissociation enthalpies were also derived as DH degrees (C(6)H(5)O-H) - DH degrees (o-CH(3)C(6)H(4)O-H) = 8.1 +/- 4.0 kJ.mol(-1), DH degrees (C(6)H(5)O-H) - DH degrees (m-CH(3)C(6)H(4)O-H) = 0.9 +/- 3.4 kJ.mol(-1), and DH degrees (C(6)H(5)O-H) - DH degrees (p-CH(3)C(6)H(4)O-H) = 5.9 +/- 4.5 kJ.mol(-1). Based on the differences in Gibbs energies of formation obtained from the enthalpic data mentioned above and from published or calculated entropy values, it is concluded that the relative stability of the cresols varies according to p-cresol < m-cresol < o-cresol, and that of the radicals follows the trend m-methylphenoxyl < p-methylphenoxyl < o-methylphenoxyl. It is also found that these tendencies are enthalpically controlled.     

A comparative study of quantitative structure-activity relationship methods based on gallic acid derivatives

By using hologram quantitative structure-activity relationship (HQSAR) and comparative molecular field analysis (CoMFA) methods, the relationships between the structures of 49 gallic acid derivatives and their analgesic activity have been investigated to yield statistically reliable models with considerable predictive power. The best HQSAR model was generated using atoms, bond and connectivity as fragment distinction parameters and fragment size 5-7 from a hologram length of 307 with 3 components. High conventional r2 (r2 = 0.825) and cross-validation r2 (r2(cv) = 0.726) values were obtained. CoMFA analyses varying lattice size and location, grid spacing, probe charges and using, Tripos standard and Indicator force field were performed. The best model was developed with 4 components using sp3-hybridized carbon atom with +1.0 charge as probe, grid spacing (2 A), lattice offset (1.0, 3.0, -2.5). The CoMFA model showed a conventional correlation coefficient r2 of 0.889 and across-validation r2(cv) equals to 0.633. The robustness and predictive ability of the HQSAR and CoMFA models have been validated by means of an external test set. The results indicate that both models possess high statistical quality in the prediction of analgesic potency of novel gallic acid analogs.     

Hydrolysis of uranium(VI) at variable temperatures (10-85 degrees C)

The hydrolysis of uranium(VI) in tetraethylammonium perchlorate (0.10 mol dm(-3) at 25 degrees C) was studied at variable temperatures (10-85 degrees C). The hydrolysis constants (*beta(n,m)) and enthalpy of hydrolysis (Delta H(n,m)) for the reaction mUO(2)(2+) + nH(2)O = (UO(2))(m)(OH)(n)((2m-n))+) + nH(+) were determined by titration potentiometry and calorimetry. The hydrolysis constants, *beta(1,1), *beta(2,2), and *beta(5,3), increased by 2-5 orders of magnitude as the temperature was increased from 10 to 85 degrees C. The enthalpies of hydrolysis, Delta H(2,2) and Delta H(5,3), also varied: Delta H(2,2) became more endothermic while Delta H(5,3) became less endothermic as the temperature was increased. The heat capacities of hydrolysis, Delta C(p(2,2)) and Delta C(p(5,3)), were calculated to be (152 +/- 43) J K(-1) mol(-1) and -(229 +/- 34) J K(-1) mol(-1), respectively. UV/Vis absorption spectra supported the trend that hydrolysis of U(VI) was enhanced at elevated temperatures. Time-resolved laser-induced fluorescence spectroscopy provided additional information on the hydrolyzed species at different temperatures. Approximation approaches to predict the effect of temperature were tested with the data from this study.