Prediction of vapour pressure using descriptors derived from molecular dynamics

Vapour pressures of organic materials can be predicted to high levels of accuracy using cohesive energies and solubility parameters derived from molecular dynamics simulations that use good forcefields. It is found that over 90% of the correlation with vapour pressure is accounted for by a single cross term involving the product of either the molecular weight or molar volume of a molecule and its cohesive energy density.     

Novel shape descriptors for molecular graphs.

We report on novel graph theoretical indices which are sensitive to the shapes of molecular graphs. In contrast to the Kier's kappa shape indices which were based on a comparison of a molecular graph with graphs representing the extreme shapes, the linear graph and the "star" graph, the new shape indices are obtained by considering for all atoms the number of paths and the number of walks within a graph and then making the quotients of the number of paths and the number of walks the same length. The new shape indices show much higher discrimination among isomers when compared to the kappa shape indices. We report the new shape indices for smaller alkanes and several cyclic structures and illustrate their use in structure-property correlations. The new indices offer regressions of high quality for diverse physicochemical properties of octanes. They also have lead to a novel classification of physicochemical properties of alkanes.     

Control of molecular topology and metal nuclearity in multimetallic assemblies: designer metallosiloxanes derived from silanetriols

Lipophilic N-bonded silanetriol RSi(OH)(3) (R=(2,6-iPr(2)C(6)H(3))N(SiMe(3))) can be utilized as an effective synthon for building a variety of multimetallic assemblies containing the Si-O-M motif. The type of metallosiloxane synthesized-its nuclearity and its molecular topology-can be readily modulated by the choice of the metal substrate, reaction stoichiometry, and reaction conditions. It is anticipated that the synthetic principles elaborated here will allow the design of many other multifunctional synthons.     

Peptidic molecular brushes with enhanced chirality

Tethering oligopeptides through one end densely packed onto a linear polymer main chain will greatly reduce freedom of the peptide chains, which affords an easy access to investigate the secondary structure of peptides under constrained condition. Herein, molecular brushes with densely grafted monodispersed Cbz‐protected oligolysine were efficiently synthesized via free radical polymerization of the macromonomer‐bearing lysine octamer, and the secondary structures of the oligopeptide side chains in solutions were investigated. To examine the architecture effects on helical conformation, circular dichroism spectra from the polymer were compared with that from the corresponding macromonomer. To check the chemical structural effects on conformation of the oligopeptide, Cbz groups from the molecular brushes were deprotected, and the secondary structures of the polymers were compared before and after the deprotection. Conformation of the deprotected polymer was further explored by varying solution pH values. Complexation of the positively charged, deprotected polymer with anionic surfactant provides an alternative route to mediate the secondary structures of the short peptides in the constrained environment. It has been found that oligolysine side chains within the molecular brushes can adopt enhanced α‐helical conformation through the crowding structures or can form β‐sheet by hydrophobic interactions between the complexed surfactants. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012