Solubility of oxygen, carbon dioxide and water in semifluorinated alkanes and in perfluorooctylbromide by molecular simulation

Solubilities of oxygen, carbon dioxide and water in substituted fluorocarbons perfluoroctylethane (PFOE), perfluorohexylethane (PFHE), perfluorohexylhexane (PFHH) and perfluoroalkylbromide (PFOB) were studied by computer simulation, between 293 and 313 K at 1 bar. The solubilities do not show a marked temperature dependence, are similar in all solvents and have values of the order of 4×10⁻³ for oxygen, 2×10⁻² for carbon dioxide and 3×10⁻⁶ for water, in mole fraction. The gases are slightly less soluble in PFHE when compared with the other solvents, whereas water is slightly more soluble in this liquid. The solubilities were obtained from Henry’s law coefficients, in turn derived from residual chemical potentials of the solutes at infinite dilution obtained by molecular simulation techniques using full atomistic force fields.     

Surface organization, light-driven surface changes, and stability of semifluorinated azobenzene polymers

A series of polymers with 4-perfluoroalkyl-modified azobenzene side groups was investigated for its light-induced changes in surface properties. The ultraviolet (UV) light activated trans to cis isomerization of the azobenzene group, and the influence of molecular order and orientation on this process were studied using near-edge X-ray absorption fine structure (NEXAFS) spectroscopy and water contact angle measurements. Light-induced molecular reorganization in the near-surface region was studied by NEXAFS using in situ UV irradiation of polymer thin films. Differential scanning calorimetry and wide-angle X-ray scattering studies showed that sufficiently long fluoroalkyl groups formed well-ordered smectic mesophases in the bulk, as well as on the surface, which was evidenced by NEXAFS. The disruption of mesogen packing by photoisomerization was found to be influenced by the fluoroalkyl segment length. Surfaces with perfluorohexyl and perfluorooctyl groups that showed high orientational order were also highly resistant to light-induced changes. In such cases, the trans-cis isomerization resulted in greater lowering of the azobenzene phenyl ring order parameters than the perfluoroalkyl order parameters. UV exposure caused reorientation of the phenyl rings of the azobenzene group, but the terminal perfluoroalkyl segments remained more or less ordered.     

In-plane surface scattering in two and three dimensions. Rainbow structure,energy spectra and the influence of surface temperature

A theory for in-plane atom-surface scattering has been developed based on classical mechanics. It features single and double binary collisions with surface atoms and describes the contributions of the different types of collisions to the angular and energy distributions of the scattered particles. The differences between a purely two-dimensional treatment and the three-dimensional treatment of the scattering problem are discussed. Since it is found that these differences can be quite large a method has been developed which makes it possible to correct a two-dimensional calculation for the contribution of three-dimensional effects without an undue increase in computer time. Parameters of the interaction potential as well as the angle of incidence are found to significantly influence this correction. The theory also accounts for the thermal motion of the surface atoms treating them as harmonic oscillators and assuming the density of phonan states D(ω) from Debye's theory.     

Calculations of induced moments in large molecules I. Polarizabilities and second hyperpolarizabilities in some alkanes

We report the results of coupled Hartree-Fock computations for the average polarizability, , and hyperpolarizability, , of CH₄, C₂H₆, C₃H₆ and C₃H₈. The Hamiltonian matrices are constructed from an extended CNDO model. Small as well as large basis sets were tested. Agreement with available experimental values is within 13% for and 31% for .     

Self-assembly, structural, and retrostructural analysis of dendritic dipeptide pores undergoing reversible circular to elliptical shape change

The synthesis of dendritic dipeptides (4-3,4-3,5-4)12G2-CH(2)-Boc-L-Tyr-L-Ala-OMe and (4-3, 4-3,5-4)12G2-CH(2)-Boc-D-Tyr-D-Ala-OMe is described. These dendritic dipeptides self-assemble into porous elliptical and circular columns that in turn self-organize into centered rectangular columnar and hexagonal columnar periodic arrays. The transition from porous elliptical to porous circular columns is mediated in a reversible or irreversible way by the thermal history of the sample. A method to determine the dimensions of hollow elliptical and circular columns by the reconstruction of the small-angle powder X-ray diffractograms of the centered rectangular or hexagonal columnar lattices was elaborated. This technique together with wide-angle X-ray experiments performed on aligned fibers provided access to the structural and retrostructural analysis of elliptical supramolecular pores. This procedure is general and can be adapted for the determination of the dimensions of pores of any columnar shape.     

Experimental investigation of selective colloidal interactions controlled by shape, surface roughness, and steric layers

Photolithography can be used to form monodisperse colloids of well-defined, nonspherical shape in a negative photoresist, SU-8. In aqueous suspension, in the presence of dextran as a depletant, we showed previously that the aggregation of these particles was highly selective for the end-to-end configuration: cylinders assembled into linear aggregates that could extend to lengths of tens of units without significant lateral aggregation. This article presents an in-depth study of the mechanisms by which these particles aggregate. In particular, we focus on the roles of global shape, roughness, and adsorbed layers of surfactants in mediating depletion, van der Waals (vdW), and electrostatic interactions between these particles. We describe in detail the fabrication and characterization of the particles. To allow for the interpretations of the experiments, we present predictions for the interactions between mathematically ideal cylinders with smooth surfaces, and a statistical thermodynamic model for the linear assemblies. We present experimental observations of the state of aggregation as a function of concentration of dextran and ionic strength for typical particles that present roughness of larger amplitude on their rounded side walls than on their flat ends. We compare this behavior to that of particles that lack this contrast in roughness; this comparison indicates that roughness can serve to attenuate strongly the attractive depletion interactions. To achieve a more quantitative measure of this effect, we analyze size distributions of linear aggregates to calculate the energies of the end-to-end "bonds" on the basis of our statistical model. We find that both the depletion and vdW interactions are attenuated approximately 20 fold relative to predictions for smooth surfaces. We conclude with an assessment of outstanding questions and opportunities to exploit shape and roughness to direct the self-assembly of colloids.     

Control on shape, porosity and surface hydrophilicity of hematite particles by using polymers

The shape, porosity, and surface hydrophilicity of hematite particles formed from a forced hydrolysis reaction of acidic FeCl₃ solution were controlled by using a trace of polymers (0.001 and 0.003 wt%). The spherical particles were produced on the systems with polyvinyl alcohol (PVA) and polyaspartic acid (PAS). In the case of polyacryl amide (PAAm), slightly small spherical particles were precipitated at 0.003 wt%. However, polyacrylic acid (PAAc) and poly-γ-glutamic acid (PGA) gave ellipsoidal particles. This morphological change on hematite particles depended on the order of functional groups of polymers as –OH<–CONH₂<–COOH<–COOH and ⟩C=O, corresponding to the order in extent of polymer molecules for complexation to Fe³⁺ ions and adsorption onto particle surface. Accompanying this order, the hematite particles produced were changed from less porous to microporous. On the other hand, only the system with 0.003 wt% of PAAm produced mesoporous hematite particles. Choosing the kinds of polymers also controlled the ultramicroporosity and surface hydrophilicity of the particles.     

Molecular mechanics and molecular shape. V. on the computation of the bare surface area of molecules

This article examines the numerical estimation of molecular surface areas within the model of overlapping atomic spheres. One has the choice of either basing the estimate on all elements that contribute to the surface, or of ignoring systematically some elements in the interatomic clefts. It is argued that the second choice, even though more approximate, implicitly improves on the model and is to be preferred. Since surface areas are not measurable, the demonstration is unavoidably roundabout, relying mostly on correlation analysis. Among the regressors occur two compounded parameters. One, ratio of the surface area of the equivalent sphere to the surface area, is interpreted as a measure of molecular globularity. It reflects the molecular axis-ratio and surface convolution. The other, ratio of the surface area to the volume, is interpreted as a measure of the global congestion of a chemical residue. Together with a measure of the local congestion at the point of attachment, it affects the steric hindrance that a residue offers. The relation between the surface area and the number of valence electrons is also discussed.     

Electrophoresis of large colloidal particles with surface charge layers. Position of the slipping plane and surface layer thickness

A theory is proposed for the electrophoresis of a large colloidal particle with a surface charge layer. The slipping plane is assumed to be located within the surface layer but may not be located at the boundary between the surface layer and the particle core. In previous studies, the depth of the slipping plane is assumed to coincide with the surface layer thickness. The present theory makes it possible to examine the separate dependence of the electrophoretic mobility on the position of the slipping plane and on the surface layer thickness. It is shown that, at constant amount of particle-fixed charges in the surface layer, the mobility increases as the depth of the slipping plane (d _s ) increases, while it decreases as the surface layer thickness (d _c ) increases, causing a mobility maximum in some cases ifd _s =d _c . Several approximate analytic expressions for the mobility are presented.     

Synthesis,Structures and Reactions of Polychalcogenadisilabicyclo[l.m.n]alkanes and Their Germanium Analogues

1,3-Bis[tris(trimethylsilyl)methyl]-2,4,5-trichalcogena-1,3-disilabicyclo[1.1.1]pentanes display unusual short bridgehead Si---Si distances despite the absence of formal Si—Si bonds, and chalcogen---chalcogen interactions are observed by nmr, X-ray analysis and electronic spectroscopy.     

Use of helium nanodroplets for assembly, transport, and surface deposition of large molecular and atomic clusters

The utility of continuous beam of helium droplets for assembly, transport, and surface deposition of metal and molecular clusters is studied. Clusters of propyne having from about 10 to 10(4) molecules were obtained via sequential pickup of molecules by He droplets with average sizes in the range of 10(4)-10(7) atoms. The maximum attainable flux of the propyne molecules carried by He droplets was found to be in the range of (5-15)x10(15) molecules sr(-1) s(-1), being larger in larger droplets. The size of the clusters and the flux of the transported species are ultimately limited by the evaporative extinction of the entire helium droplet upon capture of particles. It is shown that the attenuation of the He droplet beam in the process of the cluster growth can be used in order to obtain the average size and the binding energy of the clusters. Furthermore, we used He droplets for assembling and surface deposition of gold and silver clusters having about 500 atoms. Typical deposition rate of metal atoms of about 3 x 10(15) atoms sr(-1) s(-1) is comparable to or larger than obtained with other beam deposition techniques. We propose that doping of He droplets by Au and Ag atoms in two separate pickup chambers leads to formation of the bimetal clusters having core-shell structure.     

Studies of the binding mechanism between aptamers and thrombin by circular dichroism, surface plasmon resonance and isothermal titration calorimetry

Thrombin, a multifunctional serine protease, has both procoagulant and anticoagulant functions in human blood. Thrombin has two electropositive exosites. One is the fibrinogen-binding site and the other is the heparin-binding site. Over the past decade, two thrombin-binding aptamers (15-mer and 29-mer) were reported by SELEX technique. Recently, many studies examined the interactions between the 15-mer aptamer and thrombin extensively, but the data on the difference of these two aptamers binding to thrombin are still lacking and worth investigating for fundamental understanding. In the present study, we combined conformational data from circular dichroism (CD), kinetics and thermodynamics information from surface plasmon resonance (SPR) and isothermal titration calorimetry (ITC) to compare the binding mechanism between the two aptamers with thrombin. Special attentions were paid to the formation of G-quadruplex and the effects of ions on the aptamer conformation on the binding and the kinetics discrimination between specific and nonspecific interactions of the binding. The results indicated reasonably that the 15-mer aptamer bound to fibrinogen-binding site of thrombin using a G-quadruplex structure and was dominated by electrostatic interactions, while the 29-mer aptamer bound to heparin-binding site thrombin using a duplex structure and was driven mainly by hydrophobic effects.     

Mechanical activation of aluminum: 2. Size,shape, and structure of particles

The structure of active Al/C composite prepared by the mechanochemical method from aluminum and graphite powders (10–30 wt % C) is studied by scanning and transmission electron microscopies, atomic force microscopy, local elemental analysis, X-ray diffraction, as well as by adsorption and sedimentation measurements. It is established that the particles of chemically active Al/C composite represent porous plate-like aggregates with a mean size smaller than 2.5–5 m and composed of nanocrystalline aluminum blocks with a size of 15–60 nm distributed in a loose amorphous carbon. Single aluminum particles with a size of up to 10 nm are also observed; however, their weight fraction is small.Translated from Kolloidnyi Zhurnal, Vol. 66, No. 6, 2004, pp. 819–828.Original Russian Text Copyright © 2004 by Streletskii, Pivkina, Kolbanev, Borunova, Leipunskii, Pshechenkov, Lomaeva, Polunina, Frolov, Butyagin.     

The grafting of phthalic acid onto polyurethane copolymer and its impact on the surface hydrophilicity,tensile stress,and shape recovery properties

Phthalic acid (PA) was grafted onto polyurethane (PU) in the PA series due to its rigid aromatic structure and carboxyl groups, but PA was simply blended with PU in the control CPA series. The cross-link density and solution viscosity of the PA series notably increased with increasing PA content, and the same parameters of the CPA series did not increase. The maximum tensile stress of the PA series sharply increased due to the chemical cross-linking of the grafted PA, and the tensile strain at break slowly decreased with increasing PA content. The shape recovery of the PA series at 10?°C rapidly increased upon the grafting of PA; however, that of the CPA series decreased with increasing PA content. The hydrophilicity of PU was enhanced by the grafting of PA based on the water contact angle and water vapor permeation results. The low temperature flexibility of the PA series improved more than that of the CPA series under freezing conditions with increasing PA content due to the chemical cross-linking and steric and electrostatic repulsion between PU moieties. Overall, the grafted PA definitely increased the maximum tensile stress, shape recovery, and low temperature flexibility of PU.     

Complexation behavior of gelatin with amphiphilic drug imipramine hydrochloride as studied by conductimetry,surface tensiometry and circular dichroism studies

Herein we report our studies carried out on the interaction between IMP and gelatin in aqueous medium at 25 °C using conductimetry, surface tensiometry and circular dichroism (CD) techniques. Both surface tensiometry and conductimetry results indicate that the drug interacts with the gelatin in a surfactant-like manner, i.e., both critical aggregation (cac) and polymer saturation points (psp) were observed. The interaction starts with the formation of a highly surface-active complex as revealed by the lowering of surface tension on the addition of drug to the macromolecule. The decrease in cac on increasing gelatin concentration is an indication of the strong interaction between gelatin and IMP. However, at low concentration of gelatin the interaction was not much strong as exposed by surface tension study, i.e., the cac was not very clear (as with higher gelatin concentrations). As usual, the psp increased on increasing the gelatin concentration and was always higher than the critical micelle concentration of the drug in pure aqueous medium. Using CD measurements the influence of IMP on the secondary structure of gelatin in aqueous solutions was also investigated. CD studies (performed at very low drug concentrations) illustrated that the random coil content of gelatin increases with increasing drug concentration. Free energies of aggregation (ΔG_agg) and micellization (ΔG_mic) were computed with the help of degrees of micelle ionization obtained from the specific conductivity – [IMP] plots.     

Manipulation of gold nanoparticles: influence of surface chemistry, temperature, and environment (vacuum versus ambient atmosphere)

We have manipulated raw and functionalized gold nanoparticles (with a mean diameter of 25 nm) on silicon substrates with dynamic atomic force microscopy (AFM). Under ambient conditions, the particles stick to silicon until a critical amplitude is reached by the oscillations of the probing tip. Beyond that threshold, the particles start to follow different directions, depending on their geometry and adhesion to the substrate. Higher and lower mobility were observed when the gold particles were coated with methyl- and hydroxyl-terminated thiol groups, respectively, which suggests that the adhesion of the particles to the substrate is strongly reduced by the presence of hydrophobic interfaces. Under ultrahigh vacuum conditions, where the water layer is absent, the particles did not move, even when operating the atomic force microscope in contact mode. We have also investigated the influence of the temperature (up to 150 degrees C) and of the geometrical arrangement of the particles on the manipulation process. Whereas thermal activation has an important effect in enhancing the mobility of the particles, we did not find differences when manipulating ordered versus random distributions of particles.     

Local pressure components and surface tension of spherical interfaces. Thermodynamic versus mechanical definitions. I. A mesoscale modeling of droplets

We report mesoscale simulations of spherical drops to investigate the surface tension and mechanical properties. The Monte Carlo simulations are performed with the multibody potential commonly used in the many-body dissipative particle dynamics simulations. We establish here the calculation of the local normal and transverse components of the pressure tensor via the perturbation volume within the thermodynamic route. The different profiles of these components are compared to those calculated using the mechanical approach. To complete the mesoscale modeling of drops, we investigate the curvature dependence of the surface tension in order to calculate the Tolman's length, which is found to be negative.