Der ‘Push-Pull’-Effekt von ‘Push-Pull’-Oligoacetylenen. Eine 13C-NMR-Untersuchung

The ‘Push-Poll’ Effect of ‘Push-Pull’ Oligoacetylenes. A ¹³C-NMR Investigation According to ¹³C-chemicaI shifts of ‘push-pull’ oligoacetylenes 1 – 4 , the ‘push-pull’ effect (i.e. π delocalization induced by ‘push-pull’ substituents) rapidly decays in this series. To correct for other than π -charge-density effects, Δδ values of symmetrically placed C-atoms of the oligoacetylene chain are discussed. Stereoelectronic resteffects (SER) of the substituents on terminal C-atoms of PP-ketones 1a – 3a and PP -esters 1b – 4b are estimated from the residual Δδ of the asymptotes of Fig. 3. Fig. 4 convincingly shows that Δδ values are dramatically decreasing with increasing number n of acetylene units between the push and pull substituents. Assignment problems of ‘push-pull’ triacetylenes 3 have been solved by ¹³C labelling of the CO group of 3a .     

Synthesis of (1α)‐1,25‐Dihydroxyvitamin D3 with a β‐Positioned Seven‐Carbon Side Chain at C(12)

A convergent synthesis of an analogue of (1α)‐1,25‐dihydroxyvitamin D₃ ( 1b ) with a C₇ side chain at C(12), i.e., of 5 (Fig.), is described. A key step of the synthesis is the assembly of the triene system by a Pd^II‐catalyzed ring closure of an enol triflate (‘bottom’ fragment) followed by coupling of the resulting Pd^II intermediate with an alkenylboronate (‘upper’ fragment) (Scheme 2). The synthetic strategy allows isotopic labelling at the end of the synthesis.     

α-D-Glycosyl-Substituted α,α-D-Trehaloses with (1 → 4)-Linkage: Syntheses and NMR Investigations

Two symmetrical trehalose glycosyl ‘acceptors’ 4 and 6 were prepared and three of the unsymmetrical type, 8 , 10 , and 11 . Glucosylation of symmetrical ‘acceptor’ 4 gave a higher yield of trisaccharide (44%) than protect ve-group manipulation, namely via selective debenzylidenation 2 → 9 or monoacetylation 2 → 5 which proceeded in moderate yields (33–34%). A comparison of catalysts in the cis-glucosylation of trehalose ‘acceptor’ 10 with tetra-O-benzyl-β-D -glucopyranosyl fluoride 13 profiled triflic anhydride ((Tf)₂O) as a new reactive promoter yielding 92% of trisaccharide 14 , deblocking gave the target saccharide α-D -glucopyranosyI-( 1 → 4 )-α,α-D -trehalose. ¹H-NMR spectra of most compounds were analyzed extensively. The use of the ID TOCSY technique is advocated for its time efficiency, if needed supplemented by ROESY experiments.     

Reactions of Polycyclic Ketones with Dimethoxycarbene; a Convenient Route for a ‘One‐Pot’ Preparation of Some α‐Hydroxycarboxylic Acid Esters

Polycyclic ‘cage’ ketones, such as pentacyclo[5.4.0.0^2,6.0^3,10.0^5,9]undecan‐8‐one ( 10 ), pentacyclo[5.4.0.0^2,6.0^3,10.0^5,9]undecane‐8,11‐dione ( 11 ), and adamantan‐2‐one ( 16 ) were treated with the nucleophilic dimethoxycarbene (DMC; 1 ), which was generated thermally from 2,5‐dihydro‐2,2‐dimethoxy‐5,5‐dimethyl‐1,3,4‐oxadiazole ( 4a ) in boiling toluene. In this ‘one‐pot’ procedure, the α‐hydroxycarboxylic acid ester 12 or a corresponding derivative 15 or 17 was obtained (Schemes 4–7). Additionally, ‘cage’ thione 21 was treated with DMC under the same conditions yielding dimethoxythiirane 22 (Scheme 8). Subsequent hydrolysis or desulfurization (followed by hydrolysis on silica gel) of 22 gave α‐mercaptocarboxylate 25 and the corresponding desulfurized ester 24 , respectively. In all cases, the addition of DMC occurred stereoselectively, and the addition from the exo‐face is postulated to explain the structures of the isolated products.     

Synthese, 13C-NMR-Spektren und räumliche Struktur von ‘Push-Pull’-Diacetylenen

Synthesis, ¹³C-NMR Spectra, and X-Ray Investigation of ‘Push-Pull’ Diacetylenes Phenyl-substituted ‘push-pull’ diacetylenes 1f and 1g have been prepared by acetylation and benzoylation of the appropriate lithiodiynylamines 4 (Scheme 2). ¹³C-NMR spectra of diacetylenes 1a–g (Table 1) are discussed with respect to the expected polarisation of the diacetylene unit by ‘push’ and ‘pull’ substituents. X-Ray investigations of 1c , 1e , and 1f have been performed in view of the planned solid-state polymerisation of ‘push-pull’ diacetylenes. In the crystalline state, diacetylenes 1c and 1f are stacked, however, the stacking parameters do not allow a solid-state polymerisation.     

One‐Step Synthesis of Dialkyl 2‐[(4‐Methylphenyl)sulfonyl]‐1H‐pyrrole‐3,4‐dicarboxylates by Reaction of Acetylenedicarboxylates with ‘Tosylmethyl Isocyanide’ (TsMIC) and Triphenylphosphine

The reactive 1 : 1 adducts in the reaction between Ph₃P and dialkyl acetylenedicarboxylates have been trapped with ‘tosylmethyl isocyanide’ (TsMIC ; 1 ) to yield dialkyl 2‐[(4‐methylphenyl)sulfonyl]‐1H‐pyrrole‐3,4‐dicarboxylates 3 (Scheme 1). The structures of the highly functionalized compounds 3 were corroborated spectroscopically (IR, ¹H‐ and ¹³C‐NMR, and EI‐MS) and by elemental analyses. A plausible mechanism for this type of cyclization is proposed (Scheme 2).     

Suicide Inactivation of Dioldehydrase by 2‐Chloroacetaldehyde: Formation of the ‘cis‐Ethanesemidione’ Radical,and the Role of a Monovalent Cation

Dioldehydrase is an adenosylcobalamin‐dependent enzyme that catalyzes the dehydration of (R)‐ or (S)‐propane‐1,2‐diol to propanal. The reaction proceeds by a radical mechanism initiated by the homolytic scission of the covalent Co? C(5′) bond in the coenzyme to form cob(II)alamin and the 5‐deoxyadenosyl radical as transient intermediates. Dioldehydrase is subject to ‘suicide inactivation’ by substrate/product analogs. Inactivation by 2‐chloroacetaldehyde converts the inactivator into the ‘cis‐ethanesemidione’ radical. A mechanism for this process includes reaction of chloroacetaldehyde in the reverse of the normal catalytic process to a rearranged radical that eliminates HCl. K⁺ and other monovalent cations of similar size, including Tl⁺, are required for dioldehydrase activity and for suicide inactivation by glycolaldehyde or 2‐chloroacetaldehyde. A K⁺ ion is bound to propane‐1,2‐diol in dioldehydrase. Both EPR and pulsed‐EPR experiments show that the magnetic nuclei of thallous ions (²⁰³Tl⁺, ²⁰⁵Tl⁺) do not interact with the unpaired electron in the cis‐ethanesemidione radical at the active site of dioldehydrase. Pulsed‐EPR experiments implicate a ¹⁴NH group, possibly of His¹⁴³, interacting with the radical at the active site.     

Synthesis of Enantiomerically Pure 1,5,5‐Trideuterated cis‐ and trans‐2,4‐Dioxa‐3‐phosphadecalins. 31P‐NMR Evidence of Covalent‐Bond Formation and the Stereochemical Implications in the Course of the Inhibition of δ‐Chymotrypsin

The irreversible inhibition of δ‐chymotrypsin with the enantiomerically pure, P(3)‐axially and P(3)‐equatorially X‐substituted cis‐ and trans‐configurated 2,4‐dioxa‐3‐phospha(1,5,5‐²H₃)bicyclo[4.4.0]decane 3‐oxides (X=F, 2,4‐dinitrophenoxy) was monitored by ³¹P‐NMR spectroscopy. ¹H‐Correlated ³¹P{²H}‐NMR spectra enabled the direct observation of the vicinal coupling (³J) between the P‐atom of the inhibitor and the CH₂O moiety of Ser¹⁹⁵ (=‘Ser¹⁹⁵’(CH₂O)), thus establishing the covalent nature of the ‘Ser¹⁹⁵’(CH₂O? P) bond in the inhibited enzyme. The stereochemical course of the phosphorylation is dependent on the structure of the inhibitor, and neat inversion, both inversion and retention, as well as neat retention of the configuration at the P‐atom was found.     

Synthese von ‘D-Isothreonin’ und ‘L-Alloisothreonin’ aus L-Alanin

Synthesis of ‘D -Isothreonine’ and ‘L -Alloisothreonine’ Starting from L -Alanine Starting from L -alanine, ‘D -isothreonine’ ( = (2R, 3S)-3-amino-2-hydroxybutanoic acid) and ‘L -alloisothreonine’ ( = (2S, 3S)-3-amino-2-hydroxybutanoic acid) were synthesized.     

The ESI CAD fragmentations of protonated 2,4,6‐tris(benzylamino)‐ and tris(benzyloxy)‐1,3,5‐triazines involve benzyl–benzyl interactions: a DFT study

The electrospray ionization collisionally activated dissociation (CAD) mass spectra of protonated 2,4,6‐tris(benzylamino)‐1,3,5‐triazine (1) and 2,4,6‐tris(benzyloxy)‐1,3,5‐triazine (6) show abundant product ion of m/z 181 (C₁₄H₁₃⁺). The likely structure for C₁₄H₁₃⁺ is α‐[2‐methylphenyl]benzyl cation, indicating that one of the benzyl groups must migrate to another prior to dissociation of the protonated molecule. The collision energy is high for the ‘N’ analog (1) but low for the ‘O’ analog (6) indicating that the fragmentation processes of 1 requires high energy. The other major fragmentations are [M + H‐toluene]⁺ and [M + H‐benzene]⁺ for compounds 1 and 6, respectively. The protonated 2,4,6‐tris(4‐methylbenzylamino)‐1,3,5‐triazine (4) exhibits competitive eliminations of p‐xylene and 3,6‐dimethylenecyclohexa‐1,4‐diene. Moreover, protonated 2,4,6‐tris(1‐phenylethylamino)‐1,3,5‐triazine (5) dissociates via three successive losses of styrene. Density functional theory (DFT) calculations indicate that an ion/neutral complex (INC) between benzyl cation and the rest of the molecule is unstable, but the protonated molecules of 1 and 6 rearrange to an intermediate by the migration of a benzyl group to the ring ‘N’. Subsequent shift of a second benzyl group generates an INC for the protonated molecule of 1 and its product ions can be explained from this intermediate. The shift of a second benzyl group to the ring carbon of the first benzyl group followed by an H‐shift from ring carbon to ‘O’ generates the key intermediate for the formation of the ion of m/z 181 from the protonated molecule of 6. The proposed mechanisms are supported by high resolution mass spectrometry data, deuterium‐labeling and CAD experiments combined with DFT calculations. Copyright © 2012 John Wiley & Sons, Ltd.     

3,5‐Dihydro‐2H‐thieno[2,3‐c]pyrrole 1,1‐Dioxide – A New Simple Pyrrole Unit. Preliminary Communication

2,3‐Dihydrothiophene 1,1‐dioxide (‘2‐sulfolene’) reacted with tosylmethyl isocyanide (TsMIC) in the presence of a base to give the hitherto unknown 3,5‐dihydro‐2H‐thieno[2,3‐c]pyrrole 1,1‐dioxide (‘β′‐sulfolenopyrrole’) from the expected cyclocondensation. A serendipitous formation of this β′‐sulfolenopyrrole was found earlier, when we investigated synthetic routes to a 3,5‐dihydro‐1H‐thieno[3,4‐c]pyrrole 2,2‐dioxide (a ‘β″‐sulfolenopyrrole’) from TsMIC and 2,5‐dihydrothiophene 1,1‐dioxide (‘3‐sulfolene’). Here, we present the synthesis and characterization of β′‐sulfolenopyrrole. The X‐ray crystal‐structure analyses of β′‐sulfolenopyrrole and the isomeric β″‐sulfolenopyrrole are also reported here. This β′‐sulfolenopyrrole is a new type of a functionalized pyrrole, which is likely to be of interest for pharmaceutical purposes.     

A Quantitative Assessment of „Through-space”︁ and „Through-bond”︁ Interactions. Application to Semi-empirical SCF Models

The scheme of ‘through-space’ and ‘through-bond’ interaction of (semi)localized orbitals, originally proposed by Hoffmann, is reexamined in terms of SCF many-electron treatments. It is shown that the two types of interaction can be characterized by examining the corresponding off-diagonal matrix elements of the Hartree-Fock matrices of the localized or the symmetry adapted localized orbitals and of the partially diagonalized Hartree-Fock matrices referring to ‘precanonical orbitals’. The procedure outlined is applied to three practical examples using the semiempirical many-electron treatments SPINDO, MINDO/2 and CNDO/2:

• a A reassessment of ‘through-space’ and ‘through-bond’ interaction in norbornadiene indicates, that the latter type of interaction is also of importance for the orbital based mainly on the antisymmetric combination of the localized x-orbitals. The differences in the predictions derived from the three models are critically examined.
• b The competition between ‘through-space’ and ‘through-bond’ interaction in the series of bicyclic dienes from norbornadiene to bicyclo[4.2.2]-dcca-7,9-diene and in cyclohexa-1,4-diene, i. e. their dependence on the dihedral angle UI is reexamined. It is found that the rationalization for the orbital crossing near ω = 130° deduccd from PE. spectroscopic data can not be as simple as originally suggested and that the relay’ orbitals responsible for ‘through-bond interaction affecting both the symmetric and the antisymmetric combination of the π-orbitals extend over the whole CC-σ-system of the six membered ring.
• c ‘Through-bond’ interaction of the two lone pair orbitals in 1,4-diazabicyclo[2.2.2]octane is found to be large for their symmetric and the antisymmetric linear combination.

The analysis quoted, draws attention to some of the dangers involved in using semiempirical treatments for the interpretation of PE. data in terms of Koopmans′ theorem, without due caution.     

Variants of Solid-State and Solution Structures of (η3-Allyl)- {2-[2′-(diphenylphosphino)phenyl]-4,5-dihydrooxazole-P,N}palladium(II) hexafluorophosphates and tetraphenylborates

Crystal and solution structures of the enantiomerically pure and the racemic pairs of (η³-allyl) {2-[2′-(diphenylphosphino)phenyl]-4,5-dihydro-4-phenyloxazole}palladium(II) hexafluorophosphates ( 1 , and rac- 1 , resp.) and tetraphenylborates ( 2 , and rac- 2 , resp.) as well as (η³-allyl){2-[2′-(diphenylphosphino)phenyl]-4,5-dihydro-4-isopropyloxazole}palladium(II) tetraphenylborate ( 3 ) were characterized by X-ray crystallography and ¹H-NMR spectroscopy. In the solid state, rac- 1 and rac- 2 proved to be disordered with both diastereoisomeric complexes in the crystal. The complexes 2 and 3 exist only in the ‘exo’ form. The X-ray structures show that the [Pd^II(η³-allyl)] moiety may adopt different configurations between a nearly symmetrical three-electron Pd^II(π³-allyl) system and an asymmetrical allyl group with a η¹- and a η²-bonding to the metal center. The [Pd^II(η³-allyl)] system of rac- 1 and of ‘endo’ rac- 2 is closer to the former, and that of 2 , ‘exo’-rac- 2 , and 3 closer to the later geometry. The ¹H-NMR spectra of the hexafluorophosphates 1 and rac- 1 show two sets of signals of the allylic protons in an ‘exo’/‘endo’ ratio of 2:3. The tetraphenylborates 2, rac- 2 , and 3 give only one set of broad signals of the allylic protons.     

A Remote ‘Imidazole’‐Based Ruthenium(II) Para‐Cymene Pre‐catalyst for the Selective Oxidation Reaction of Alkyl Arenes and Alcohols

Herein we disclosed the use of a remote ‘imidazole’‐based precatalyst [(para‐cymene)Ru^II(L)Cl]⁺, C‐1 where L=2‐(4‐substituted‐phenyl)‐1H‐imidazo[4,5‐f]^[1,10] phenanthroline) for the selective oxidation of a variety of alkyl arenes/heteroarenes and alcohols to their corresponding aldehydes or ketones in presence of tert‐butyl hydroperoxide (TBHP). The remote ‘imidazole’ moiety present in the complex facilitates the activation of oxidant and subsequent generation of active species via the release of para‐cymene from C‐1 , which in‐turn was less effective without the ‘imidazole’ moiety. The mechanistic features of C‐1 promoted oxidation of alkyl arenes were also assessed from spectroscopic, kinetic, and few control experiments. The substrate scope for C‐1 promoted oxidation reaction was assessed based on the selective oxidation of 27‐different alkyl arenes/heteroarenes and 25 different alcohols to their corresponding aldehydes/ketones in moderate to good yields.     

The Structural Systematics of Protonation of Some Important Nitrogen‐base Ligands. II. Some Univalent Anion Salts of Singly Protonated Bis(2‐pyridyl)amine

Syntheses and single crystal X‐ray structure determinations are recorded for a number of normal and ‘acid’ salts of bis(2‐pyridylamine), ‘dpa’, with univalent anions, X, variously hydrated, i.e. [dpaH]X·nH₂O, and [dpaH]X·HX·nH₂O. The ‘normal’ salt arrays so characterized are for X = Br^? (n = 2, isomorphous with the previously described chloride compound) and, I^?, ClO₄^?, ‘tca^?’ (≡ Cl₃CCO₂)^? (all n = 1); acid salt arrays are described for X = NO₃^? and tca (both n = 0). In all cases except those of X = ClO₄^?, NO₃^?, there is one independent formula unit devoid of crystallographic symmetry comprising the asymmetric unit of the structure. In all cases, the proton associated with the cation is ‘chelated’ by the pair of ring nitrogen atoms, disposed ‘endo’; in the tca adducts and the nitrate salt, the total cation is disordered in each case by inversion about a real or putative inversion centre between the rings. In the perchlorate compound, the (ordered) cation lies on a crystallographic 2‐axis, as does the water molecule, and the perchlorate ion, which is disordered about such an axis; in the nitrate compound, the acid hydrogen atom is modelled as disposed on a crystallographic inversion centre between a pair of symmetry‐related nitrate groups, containing, like the Htca adduct, the [XHX]^? moiety rather than a diprotonated cation.     

Synthesis of 4‐tert‐butyldimethylsilyloxystyrene and its copolymerization with styrene using (η5‐indenyl)trichlorotitanium in the presence of methylaluminoxane

Poly(styrene‐co‐4‐tert‐butyldimethylsilyloxystyrene) as a precursor of hydroxyl‐functionalized syndiotactic polystyrene was successfully synthesized via (η⁵‐indenyl)trichlorotitanium (IndTiCl₃)‐catalyzed copolymerization of styrene with 4‐tert‐butyldimethylsilyloxystyrene in toluene at 25°C in the presence of methylaluminoxane (MAO) ([Al]/[Ti] = 2 000). The amount of styrene derivative incorporated into the polymeric chain for a 20,7 : 1 mole feed ratio of styrene to 4‐tert‐butyldimethylsilyloxystyrene was found to be 1,8 mol‐% from a ¹H NMR analysis. The styrene derivative was successfully prepared from 4‐hydroxybenzaldehyde via first protecting the hydroxyl group using tert‐butyldimethylchlorosilane followed by the ‘Wittig‐type’ reaction with the ‘Tebbe’ reagent. The yield was about 82 wt.‐% on the basis of the initial amount of 4‐hydroxybenzaldehyde used.     

DNA Interactions of the Functionalized (Mixed Polypyridine)ruthenium(II) Complex Bis(2,2′‐bipyridine‐κN1,κN1′)(methyl dipyrido[3,2‐a : 2′,3′‐c]phenazine‐11‐carboxylate‐κN4,κN5)ruthenium(2+) ([Ru(bpy)2(dppz‐11‐CO2Me)]2+)

A novel polypyridine ligand, dipyrido[3,2‐a:2′,3′‐c]phenazine‐11‐carboxylic acid methyl ester (=dppz‐11‐CO₂Me), and its ruthenium(II) complex, [Ru(bpy)₂(dppz‐11‐CO₂Me)]²⁺ ( 1 ), were synthesized and characterized. The binding properties of this complex to calf‐thymus DNA (CT‐DNA) were investigated by different spectrophotometric methods and viscosity measurements. The results suggest that the complex binds to DNA in an intercalative mode and serves as a molecular ‘light switch’ for DNA. When irradiated at 365 nm, the complex 1 promoted the photocleavage of plasmid pBR‐322 DNA.     

Preparation of the β3‐Homoselenocysteine Derivatives Fmoc‐β3hSec(PMB)‐OH and Boc‐β3hSec(PMB)‐OH for Solution and Solid‐Phase‐Peptide Synthesis and Selenoligation

The title compounds, 4 and 7 , have been prepared from the corresponding α‐amino acid derivative selenocystine ( 1 ) by the following sequence of steps: cleavage of the Se? Se bond with NaBH₄, p‐methoxybenzyl (PMB) protection of the SeH group, Fmoc or Boc protection at the N‐atom and Arndt–Eistert homologation (Schemes 1 and 2). A β³‐heptapeptide 8 with an N‐terminal β³‐hSec(PMB) residue was synthesized on Rink amide AM resin and deprotected (‘in air’) to give the corresponding diselenide 9 , which, in turn, was coupled with a β³‐tetrapeptide thiol ester 10 by a seleno‐ligation. The product β³‐undecapeptide was identified as its diselenide and its mixed selenosulfide with thiophenol (Scheme 3). The differences between α‐ and β‐Sec derivatives are discussed.     

The Interaction of π-Orbitals in Barrelene

The photoelectron spectrum (PE. spectrum) of barrelene (bicyclo[2.2.2]octatriene, 4 ) is recorded and the first four bands are correlated with orbitals obtained with the MINDO/2-SCF procedure. The structural changes accompagnying the ionisation process 4 → 4 ⁺ are qualitatively derived from the features of the top-occupied a′₂ (π) MO of 4 , which shows complete σ-π separation. The vibrational pattern of the corresponding PE. band 1. as well as complete energy-minimisation of the geometries of 4 and 4 ⁺ support the conclusion that 4 is a rather strained molecule. The interaction of the three π? bonds in 4 are discussed in terms of ‘through-space’ and ‘through-bond’ interaction with lower lying σ-orbitals. It is found that the latter is far from being negligible.     

Oligonucleotides Containing 7‐Deaza‐2′‐deoxyinosine as Universal Nucleoside: Synthesis of 7‐Halogenated and 7‐Alkynylated Derivatives,Ambiguous Base Pairing,and Dye Functionalization by the Alkyne–Azide ‘Click’ Reaction

Oligonucleotides containing 7‐deaza‐2′‐deoxyinosine derivatives bearing 7‐halogen substituents or 7‐alkynyl groups were prepared. For this, the phosphoramidites 2b – 2g containing 7‐substituted 7‐deaza‐2′‐deoxyinosine analogues 1b – 1g were synthesized (Scheme 2). Hybridization experiments with modified oligonucleotides demonstrate that all 2′‐deoxyinosine derivatives show ambiguous base pairing, as 2′‐deoxyinosine does. The duplex stability decreases in the order C_d>A_d>T_d>G_d when 2b – 2g pair with these canonical nucleosides (Table 6). The self‐complementary duplexes 5′‐d(F⁷c⁷I‐C)₆, d(Br⁷c⁷I‐C)₆, and d(I⁷c⁷I‐C)₆ are more stable than the parent duplex d(c⁷I‐C)₆ (Table 7). An oligonucleotide containing the octa‐1,7‐diyn‐1‐yl derivative 1g , i.e., 27 , was functionalized with the nonfluorescent 3‐azido‐7‐hydroxycoumarin ( 28 ) by the Huisgen–Sharpless–Meldal cycloaddition ‘click’ reaction to afford the highly fluorescent oligonucleotide conjugate 29 (Scheme 3). Consequently, oligonucleotides incorporating the derivative 1g bearing a terminal C?C bond show a number of favorable properties: i) it is possible to activate them by labeling with reporter molecules employing the ‘click’ chemistry. ii) Space demanding residues introduced in the 7‐position of the 7‐deazapurine base does not interfere with duplex structure and stability (Table 8). iii) The ambiguous pairing character of the nucleobase makes them universal probes for numerous applications in oligonucleotide chemistry, molecular biology, and nanobiotechnology.