铂类抗肿瘤药物ZD0473与双链及单链DNA作用差异的理论研究

用分子力学与量子化学相结合的MM/uff//HF/lanl2dz方法及单独的密度泛函方法探讨了新型铂类抗肿瘤药物(ZD0473)与碱基序列相同的双链及单链DNA片段几何结构、相互作用及电子结构方面的异同.结果表明,虽然药物分子都能与单、双链DNA形成稳定的复合物,但双链复合物与DNA形成的配位键比单链复合物稍强,氨中的氢与O6G₈间形成的氢键更强,甲基吡啶所造成的位阻效应更高,使得肿瘤细胞对药物的抗药性进一步降低.     

铂类抗肿瘤药物ZD0473和顺铂识别碱基的能量基础

用分子力学与量子化学相结合的方法HF/lanl2dz//MM/uff及密度泛函方法B3LYP/lanl2dz//6-31g*探讨了ZD0473和顺铂分别与四个DNA片段识别所形成的GG,3′AG5′,3′GA5′及AA复合物的差异.结果表明,两种药物与GG碱基对的结合能力明显强于其他碱基对,从而显示出对GG碱基对更强的识别能力,而且由ZD0473构成的每种复合物的药物部分与DNA的相互作用能都比顺铂所形成的相应复合物的作用能大,说明ZD0473与DNA的结合能力强,抗肿瘤活性高.形成3′GA5′复合物而难以形成3′AG5′复合物的原因主要在于药物分子首先识别碱基G形成单配物,其次与单配物的结构变迁相关.     

Heterogenous catalytic method for the synthesis of biquinolines and bipyridines

A method has been developed for the synthesis of 2,2′- and 3,3′-biquinolines and of 4,4′-bipyridine based on the coupling of 2- and 3-bromoquinoline or 4-bromopyridine using a Pd/C-hydrazine-KOH catalytic system. Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 12, pp. 1839–1840, December, 2008.     

稀土掺杂Lu3Al5O12荧光粉的发光特性及能量传递

采用高温固相法制备了Ce、Sm共掺Lu_3Al_5O_(12)荧光粉。通过X射线衍射分析、荧光光谱分析研究了样品的结构、发光特性,并通过理论计算研究了能量传递效率、能量传递的临界距离以及能量传递方式。X射线衍射分析表明所制备的荧光粉具有单一的石榴石结构;荧光光谱分析表明,在464 nm蓝光激发下,Sm~(3+)的引入可增加Lu_3Al_5O_(12)∶Ce,Sm发射光谱中红光成分,并且随着Sm~(3+)浓度的增加,Ce~(3+)发光强度逐渐减弱。计算出Ce~(3+)、Sm~(3+)之间的能量传递效率高达77.42%,确定了Ce~(3+)、Sm~(3+)之间的能量传递机制为偶极-偶极相互作用。     

Addition of diazocyclopropane generatedin situ to vinyl bromide and chemical transformations of the resulting 5-bromospiro(1-pyrazoline-3,1′-cyclopropane)

The reaction of diazocyclopropane generatedin situ with vinyl bromide occurs as regioselective 1,3-dipolar cycloaddition to give 5-bromospiro(1-pyrazoline-3,1′-cyclopropane) in ∼60% yield. Reactions of the latter with nucleophilic reagents, which can occur both with retention and opening of the cyclopropane ring, were studied. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 688–690, April 1998.     

Reaction of diketene with cyanothioacetamide: A convenient and regioselective method for the preparation of new 4(1H)-pyridone derivatives

The reaction of diketene with cyanothioacetamide in dry dioxane in the presence of triethylamine gives triethylammonium 3-cyano-6-methyl-4-oxo-1,4-dihydro-2-pyridinethiolate. The regioselective S-alkylation of this thiolate is a convenient method for the preparation of substituted 4(1H)-pyridones and also derivatives of thiazolo[3,2-a]pyridine and thieno[2,3-b]pyridine. The action of 2-amino-1,1,3-tricyanopropene on this thiolate leads to its transformation into a new heterocyclic system, namely, 5H-pyrido[2′,3′:4,5]thiopyrano[2,3-b]pyridine; treatment with iodine yields the oxidation product, namely, the corresponding bis(2-pyridyl) disulfide. The structure of isopropyl (3-cyano-6-methyl-4-oxo-1,4-dihydro-2-pyridinyl)thioacetate was confirmed by X-ray diffraction structural analysis. __________ Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 5, pp. 716–725, May, 2007.     

Synthesis and some properties of 6-di(tri)fluoromethyl-and 5-di(tri)fluoroacetyl-3-methyl-1-phenylpyrano[2,3-<Emphasis Type="Italic">c</Emphasis>]pyrazol-4(1<Emphasis Type="Italic">H</Emphasis>)-ones

Condensation of 4-acetyl-5-hydroxy-3-methyl-1-phenylpyrazole with R^FCO₂Et (R^F = CF₂H, CF₃) in the presence of LiH affords 4-di(tri)fluoroacetoacetyl-5-hydroxy-3-methyl-1-phenylpyrazoles from which 6-di(tri)fluoromethyl-and 5-di(tri)fluoroacetyl-3-methyl-1-phenylpyrano[2,3-c]pyrazol-4(1H)-ones were synthesized. The reactions of pyrano-pyrazoles with hydrazine hydrate, ethyl mercaptoacetate, or aromatic amines proceed at the C(6) atom with pyrone ring opening and formation of aminoenones, pyrazoles, or thiophenes with the 5-hydroxy-3-methyl-1-phenyl-4-pyrazolyl fragment. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 12, pp. 2750–2754, December, 2005.     

Synthesis and reactivity of thieno[2,3-<Emphasis Type="Italic">b</Emphasis>]pyridine-2,3-diamines

It has been established that the interaction of N¹-(2-hydroxyphenylmethylthieno[2,3-b]pyrid-3-yl)arylamides with hydrazine hydrate leads to thieno[2,3-b]pyridine-2,3-diamines. It was shown that the reaction of the latter with acetylacetone and acetoacetic ester occurs regioselectively at the amino group in position 3 of the thiophene ring. __________ Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 9, pp. 1400–1408, September, 2007.     

Optical probes for detection and quantification of neutrophils’ oxidative burst. A review

Neutrophils, also known as polymorphonuclear leukocytes (PMN), are the most common type of white blood cells, comprising about 50-70% of all white blood cells. In the event of inflammatory processes, neutrophils display increased mobility, tissue influx ability, prolonged life span, and an increased phagocytic capacity, constituting the initial participants in the cellular defense of the organism. One of the most important defense systems of neutrophils corresponds to their ability to mediate a strong oxidative burst through the formation of reactive oxygen species (ROS) and reactive nitrogen species (RNS). While oxidative burst is important for the elimination of invading microorganisms, the overproduction of ROS and RNS or the impairment of endogenous antioxidant defenses may result to detrimental effects to the host. The nature and the extent of ROS and RNS production by neutrophils in response to different stimuli is, consequently, a matter of extensive research, with scientific reports showing an enormous variability on the detection methodologies employed. This review attempts to provide a critical assessment of the most common approaches to identify and quantify reactive species formed during the neutrophils’ oxidative burst. The detection mechanisms and performance, as well as advantages and limitations of the different methodologies, are scrutinized, focusing on the use of fluorimetric, chemiluminometric and colorimetric probes.     

Synthesis and structures of 5(3H)-oxotetrahydro-1H-imidazo[4,5-c][1,2,5]thiadiazole 2,2-dioxides

The reactions of sulfamides with 4,5-dihydroxyimidazolidin-2-ones were studied at ambient and high pressure. The previously unknown derivatives of 5(3H)-oxotetrahydro-1H-imidazo-[4,5-c][1,2,5]thiadiazole 2,2-dioxide, viz., sulfo analogs of tetrahydroimidazo[4,5-d]imidazole-2,5-(1H,3H) diones (glycolurils), were synthesized. The structures of some of these compounds were established by X-ray diffraction. The high-pressure reactions performed under conditions of solvent phase transitions afforded also N-(1,3-diethyl-5-hydroxy-2-oxoimidazolidin-4-yl)-N,N′-dialkylsulfamides. Among these compounds, a new conglomerate was found. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 8, pp. 1711–1719, May, 2008.     

H nuclear magnetic resonance spectroscopy analysis for simultaneous determination of levodopa, carbidopa and methyldopa in human serum and pharmaceutical formulations

A method utilizing NMR spectroscopy has been developed to confirm the identity and quantity of levodopa, carbidopa and methyldopa in human serum and pharmaceutical preparations. The method is based on 500 MHz proton NMR spectra of individual catecholamine molecules. Qualitative and quantitative analyses are based on resonance characteristics of the functional groups present in their structures and the integral ratio of selected signals belonging to different compounds with respect to those of an internal standard, respectively. Experiments are performed to validate the quantitative NMR method, and the linearity and reproducibility of the proposed method are verified. The detection limit of the proposed method was estimated as 4.2, 1.7 and 1.6  μg ml⁻¹ for levodopa, carbidopa and methyldopa, respectively. The recovery studies performed on human serum samples ranged from about 82-96% with relative standard deviations of <4%. The method was also applied successfully to the determination of each active compound in real pharmaceutical samples, and compared with the results obtained by the reference methods. The method is rapid, precise, accurate, and suitable for routine analyses.     

The chemistry of binuclear palladium(II) and platinum(II) complexes

The chemistry of binuclear palladium(II) and platinum(II) complexes has been reviewed. This review deals with complexes derived from various classes of ligands and covers various aspects, viz. synthesis, spectroscopic and structural features and chemical reactivity, of these complexes. Applications of these complexes are briefly described in the respected sections.     

Synthesis and characterisation of bis(pentafluorophenyl)antimony(V) cations, [(C6F5)2SbL3]

Pentacoordinate complex cations of the general formula [(C₆F₅)₂SbL₃]³⁺ stabilized as solid salts in combination with tetraphenylborate (BPh₄), tetrafluorobroate (BF₄) anions, where L=DMSO, Ph₃AsO, PyO, DMF, α-, β- and γ-picoline have been isolated. The newly formed complexes were characterized by elemental analysis, molar conductance measurements, solid-state IR and and NMR. From these results, a five-fold coordination around antimony was required.     

The regioselectivity of the formation of 2-pyrazolylthiazoles and their precursors from the reaction of 2-hydrazinothiazoles with 4,4,4-trifluoro-1-hetaryl-1,3-butanediones

Reaction of 2-hydrazinothiazoles 1 with 1-thienyl- and 1-furyl-1,3-butanediones 2a,b in methanol in the presence of hydrochloric acid mainly leads to a mixture of pyrazoles 3 and pyrazolines 4 or pyrazoles 3 and 5 in strong acidic conditions. Isomeric hydrazones 6 and pyrazolines 4 were formed and isolated in these reactions in the absence of hydrochloric acid. It has been shown that the regioselectivity in the reaction of diketones 2 with hydrazine 1 is governed by both the concentration of acid and the nature of substituents in the 1,3-diketones 2. Cyclization of hydrazones 6 is shown to occur under milder conditions than dehydration for pyrazolines 4. The new heterocyclic compounds were prepared and fully characterized by NMR spectra and by X-ray analysis for 3c.     

Atom transfer radical polymerization on the interior of the P22 capsid and incorporation of photocatalytic monomer crosslinks

We have successfully used atom transfer radical polymerization (ATRP) to form linear and crosslinked polyacrylamide and polyacrylate polymers, constrained within the virus like particle (VLP) derived from the bacteriophage P22. Polymerization of Tris(hydroxymethyl)methylacrylamide was initiated, in a spatially controlled manner, using macroinitiators derived from two different mutants of P22, S39C and K118C. Initiation from the S39C mutant results in spatially confined polymer growth on the interior of P22 while initiation from the K118C site results in a polymerized VLP in which some of the polymer is partially exposed on the outside of the capsid. Using the S39C macroinitiator we have demonstrated polymerization of aminoethyl methacrylate (AEMA) monomers, crosslinked by co-polymerization with the multifunctional monomer [Ru(5-methacrylamido-phenanthroline)₃]²⁺ resulting in an active photocatalytic P22 capsid particle.     

Thermodynamic and spectroscopic study of the interaction of Cu(II), Ni(II), Zn(II) and Ca(II) ions with 2-amino-N-(2-oxo-2-(2-(pyridin-2-yl)ethyl amino)ethyl)acetamide,a pseudo-mimic of human serum albumin

The protonation equilibria of 2-amino-N-(2-oxo-2-(2-(pyridin-2-yl)ethyl amino)ethyl)acetamide ([H₂(556)–N]) and the complexation of this ligand with Cu(II) Ca(II), Zn(II) and Ni(II) have been studied by glass electrode potentiometry and UV–visible spectrophotometry. From pH ∼2.00–11.00, five models for Cu(II) with the following complexes; MLH, ML, MLH₋₁, MLH₋₂ and MLH₋₃ were generated and observed to describe the experimental data equally well as far as the statistical criteria were concerned. The MLH₋₂ complex predominates at physiological pH in all five models, while the MLH₋₁ complex species exists only at low concentration in two models. The coordination in the MLH₋₂ complex suggested the involvement of one amino, two deprotonated peptides and one pyridyl nitrogen atoms. Molecular mechanics (MM) calculations confirmed the MLH₋₂ complex as the most stable species. Speciation calculations, using a blood plasma model, predicted that the Cu(II)–[H₂(556)–N] complex is able to mobilize Cu(II). Octanol/water partition of CuLH₋₂ showed that 30% of the complex went into the octanol phase, hence promoting percutaneous absorption of copper. The complex is a poor mimic of native copper–zinc superoxide dismutase.     

The Cubic-Two-State Equation of State: Cross-associating mixtures and Monte Carlo study of self-associating prototypes

A new equation of state for associating fluids has recently been presented by Medeiros and Tellez-Arredondo, the Cubic-Two-State Equation of State (CTS EoS) [Ind. Eng. Chem. Res. 47 (2008) 5723]. This equation arises from the coupling of the Soave–Redlich–Kwong EoS (SRK) with an association term from a two-state association model. The CTS EoS is polynomial in volume and it is able to describe vapor pressures and molar volume of associating fluids such as water, alcohol and phenol, among others. The equation is also able to describe the liquid–vapor equilibria of their mixtures with alkanes. In this paper, the physical and thermodynamic foundations of the CTS EoS are further investigated. In order to verify its applicability for cross-associating systems, the equation was employed in the prediction of phase equilibria behavior of binary alcohol–alcohol and water–alcohol mixtures. Very good agreement between predictions and experimental phase equilibria data was obtained with very simple combining rules and only one adjustable binary parameter. No additional parameters were necessary to describe ternary systems. With the purpose of checking the model's hypothesis and limitations, the two-state association term was coupled with the hard sphere Carnahan–Starling EoS, forming the CS-TS equation and the association characteristic parameters were determined theoretically for prototype association fluids. Monte Carlo NPT simulations of such fluids were performed and the results were compared with the equation's predictions. The CS-TS was able to describe qualitatively the pvT$pvT$ behavior of the prototype; nevertheless, it is not as accurate as those predictions obtained from the combination CS with Wertheim's association term. It seems that, when adjusting parameters of the CTS EoS to real substances, the discrepancies between the predicted and the real association contribution are dissipated among other adjustable parameters, specially on the dispersive term of the SRK equation. Finally, it is shown that CTS EoS isotherms can only have one or three real bigger roots than the co-volume for positive pressures, similar to cubic equations of state, and then it has the desirable form to describe vapor–liquid phase equilibria of associating compounds mixtures.