Diatomic interactions in momentum space. The 1sσg and 2pσ u states of H 2 + system

The method of momentum electron density for interatomic interactions has been applied to the two lowest σ states of the H ₂ ⁺ system. For attractive (1sσ_g) and repulsive (2pσ _u ) interactions, the behaviour of momentum density and its effect on the stabilization energy of the system are examined quantitatively. The concept of contraction and expansion of the momentum density is shown to form an important guiding principle in this approach. The origin of covalent bonding is discussed based on the energy partitioning proposed previously.     

The decomposition of a triply-charged metastable positive ion of biphenyl

The transition, [C12H10]⁺³→[C₁₁H₇]⁺² + [CH₃]⁺, has been detected both in the ion kinetic energy spectrum and in the mass spectrum of biphenyl. The width of a resulting ‘metastable peak’ has been measured by setting the magnetic field to accept [C₁₁H₇]⁺² ions and scanning the high voltage at fixed electric sector voltage. The kinetic energy released in the decomposition, calculated from the peak width, amounted to 4.5 eV. With the assumption that this energy release is due entirely to charge separation, the charge distribution in [C₁₂H₁₀]⁺³ is discussed. The derivation of the equations used to calculate the energy released is given in the Appendix.     

Nature of weak inter- and intramolecular interactions in crystals. 5. Interactions Na...H—B in a crystal of sodium salt of charge-compensated nido-carborane [9-SMe2-7,8-C2B9H10]−

The character of electron density distribution in the C₂B₃ open face, the influence of the SMe₂ group on the character of electron density distribution, and the nature of the sodium—anion interaction were studied based on the data of high-resolution X-ray diffraction study of crystals of the sodium salt of charge compensated nido-carborane [9-SMe₂-7,8-C₂B₉H₁₀]⁻ and quantum-chemical calculations for the Na...H—B bonded dimer, the isolated [9-SMe₂-7,8-C₂B₉H₁₀]⁻ anion, and the [7,8-C₂B₉H₁₀]²⁻ dianion. The character of electron density distribution in the C₂B₃ open face is analogous to the electron distribution in the cyclopentadienyl ligand. In nido-carborane, a substantial charge redistribution takes place compared to that observed in the closo analogs. The topological analysis of the electron density distribution function demonstrated that the cation—anion interactions are determined predominantly by Na...H—B contacts. The total energy of these contacts in the { [9-SMe₂-7,8-C₂B₉H₁₀]Na(thf)₂}₂ dimer estimated from X-ray diffraction data is 11.74 kcal mol⁻¹. Dedicated to Corresponding Member of the Russian Academy of Sciences E. P. Serebryakov on the occasion of his 70th birthday. __________ Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 911–918, April, 2005.     

Insertion of singlet chlorocarbenes across C-H bonds in alkanes: Evidence for two phase mechanism

Transition states for the insertion reactions of singlet mono and dichlorocarbenes (¹CHCl and ¹CCl₂) into C-H bonds of alkanes (methane, ethane, propane and n-butane) have been investigated at MP2 and DFT levels with 6–31g (d, p) basis set. The p _π of ¹CHCl and ¹CCl₂ may interact with alkane’s filled fragment orbital of either σ or π symmetry. So chlorocarbenes insertion reactions have been investigated for both (σ/π) approaches. The σ approach has been adjudicated to be the minimum energy path over the π approach both at the MP2 and DFT levels. Mulliken, NPA and ESP derived charge analyses have been carried out along the minimal energy reaction path using the IRC method for ¹CHCl and ¹CCl₂ insertions into the primary and secondary C-H bonds of propane. The occurrence of TSs either in the electrophilic or nucleophilic phase has been identified through NBO charge analyses in addition to the net charge flow from alkane to the carbene moiety. Dedicated to our senior colleague Dr V Sethuraman on the occasion of his retirement from collegiate service     

Structure and properties of 1,2-, 1,7-, and 1,12-dicarba-closo-dodecaboranes(12): A quantum chemical study

The molecular and electronic structures and thermodynamic parameters of 1,2-, 1,7-, and 1,12-dicarba-closo-dodecaborane(12) molecules in the singlet ground state were calculated by the Hartree-Fock, DFT, and MP2 (including B3LYP/6-311G(2d,2p) and MP2/6-311+G(d,2p) methods). The energies and character of spatial localization of the frontier MOs in o-, m-, p-carboranes(12) correlate with the changes in the configuration stabilities and reactivities in the reactions of carboranes with electrophilic and nucleophilic agents and bases. The electrostatic potential distributions in the molecules and the atomic charge distribution of hydrogen atoms correlate with the known chemical properties of carboranes(12). The thermodynamic parameters of two isomerization reactions, o-C₂B₁₀H₁₂ ⇌ m-C₂B₁₀H₁₂ and m-C₂B₁₀H₁₂ ⇌ p-C₂B₁₀H₁₂, calculated for the temperature range 298–1000 K agree with experimental data within the limits of measuring error. The values of the electron density and the Laplacian of the electron density at the (3, −1) critical points of the B-H and C-H bonds correlate with the reactivities of the title compounds. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 12, pp. 2074–2080, December, 2006.     

Electronic effects of Me3SiOCR2 substituents in acetylene derivatives

The σR⁰ and σ_p parameters of Me₃SiOCR₂ and HOCR₂ substituents at the triple bond were determined using the IR spectra of individual acetylene derivatives and their H-complexes. These parameters vary as the effective charge on the atoms of the C≡C fragment of terminal acetylenic alcohols and their trimethylsilyl ethers changes due to intermolecular interaction. The most reliable values of σR⁰ and σ_p parameters (−0.02 and −0.03, respectively) for the Me₃SiOCH₂ substituent were established; they indicate a sharp decrease in σ,π-conjugation of the Me₃SiOCH₂ substituent with the triple bond as compared to the Me₃SiCH₂ substituent. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 9, pp. 1759–1762, September, 1998.     

Theoretical study of solvent effects on the structures and isomerization of silylenoid H<Subscript>2</Subscript>SiLiF

The structures and isomerization of silylenoid H₂SiLiF are investigated by density functional theory (DFT) at B3LYP/6-311+G(d,p) level. The solvent effects are modeled using the self-consistent reaction field (SCRF) method with Tomasi’s polarized continuum model (PCM). Five representative solvents, i.e. benzene, ether, THF, acetone, and DMSO, are chosen for this work. Special attention is paid to THF solvent. The results indicate that the polarity of solvents has played an important role on the structures and relative stabilities of different isomers. Contrary to the three-membered ring structure 1, the relative stability of the “classical” tetrahedron structure 4 increases with increasing dielectric constants (ε) of solvents. The σ-complex isomer 3 is most unstable structure. Although the relative energies are reduced with increasing dielectric constants (ε) of solvents, the p-complex structure 2 still has the lowest energy. The effects of solvents on the dipole moments and charge distributions are also discussed.     

Mass analysis of overlapping ion kinetic energy peaks arising from charge separation in dications

A triple-sector instrument of reversed geometry, BEQQ, has been employed to resolve overlapping ion kinetic energy peaks arising from charge separation of metastable dications. Separation was achieved through mass resolution of the dication in the magnetic sector and of the singly charged product ion of greater mass in the quadrupole mass filter accompanied by energy resolution with the electric sector; the electric sector was scanned to cover the complete range of each charge separation peak. Two overlapping ion kinetic energy peaks arising from charge separation of the diphenylenimine dication and up to four overlapping ion kinetic peaks arising from charge separations of dications arising from benzene-1,3,5-d₃ have been resolved. The kinetic energy releases have been calculated in each case. Enhanced z-discrimination is observed with the final stage of mass analysis.     

Comparison of collisional activation spectra of some positive ions produced both by charge reversal of negative ions and by decomposition of positive ions

The charge reversal collision induced decomposition mass analyzed ion kinetic energy spectrum of allyl anion has been compared with the collision induced dissociation mass analyzed ion kinetic energy spectrum of allyl cation and found to be identical except for the presence of +2 ions formed by charge stripping in the spectrum of the [C₃H₅]⁺ ion. Likewise, the collision induced dissociation mass analyzed ion kinetic energy charge reversal spectrum of [CH₃Se]^? has been compared with the collision induced dissociation mass analyzed ion kinetic energy spectrum of [CH₃Se]⁺ and found to be identical. A study of the pressure dependence of the collision induced dissociation mass analyzed ion kinetic energy spectrum of [C₃H₅]⁺ and [C₃H₅]^? showed increasing fragmentation with increasing collision gas pressure, and suggests that a greater mean number of collisions converts more energy to internal modes in the collision induced dissociation mass analyzed ion kinetic energy experiment even at low pressures.     

Exploiting Sulphide Generation and Gas Diffusion Separation in a Flow System for Indirect Sulphite Determination in Wines and Fruit Juices

A flow system for sulphite determination in wines and fruit juice samples has been developed exploiting H₂S generation and gas diffusion separation. The composed sandwich gas diffusion cell was coupled in the flow manifold to permit sulphite reduction to H₂S and H₂S diffusion through a microporous PTFE membrane to produce methylene blue resulting from the reaction with N,N-dimethylphenylene diamine (DMPD) and Fe³⁺. The flow parameters were optimized, and the best results were obtained by using NaOH solution for H₂S collection. Interferences of H₂S, CO₂ and ascorbic acid were evaluated. Limits of detection (3σ) for the free and total sulfite were calculated at 0.12 and 0.25 mg L⁻¹, respectively. The results obtained by the proposed process were in agreement with the reference methods for a 95% confidence level.     

First‐principles calculations of oxygen adsorption on the Ti3Al (0001) surface

Adsorption energies and density of states for O atoms adsorption on the Ti₃Al (0001) surface have been calculated using first‐principles calculations based on density functional theory. It is found that the order of O atom adsorption on the Ti₃Al (0001) surface is associated with the adsorption energy as well as the distance of O atoms because of the interaction. The adsorption energy mainly depends on the bond number and bond strength between O and Ti atoms, and the adsorption site with rich‐Ti surface (H_I and HCP_Al) is first priority. The adsorption energy decreases with the increase of the oxygen coverage because of the characteristics of the valence d‐orbitals of transition metals surface. Furthermore, the density of states indicates that the hybridization peak of O and Ti atoms is mainly from the contribution of Ti 3d‐ and O 2p‐orbitals, and the hybridization peak of O and Al atoms from the contribution of Al 2p‐ and O 2p‐orbitals. Copyright © 2016 John Wiley & Sons, Ltd.     

Density functional studies of cation–water complexes

By using density functional ab initio techniques the equilibrium structure, binding energy, and electronic distribution were determined for [X(H₂O)_n]^+k. Specifically, when X = H, Li, and Na, k=+1 and when k=+2, X = Be and Mg. In all cases the number of water molecules varies from one through four. A correlation between the distribution of the positive charge and the binding energy of the complex was encountered. A connection between simple arguments used to describe solvation in the bulk and the results obtained here for clusters was established. © 2000 John Wiley & Sons, Inc. J Comput Chem 21: 63–68, 2000     

Ab initio study of the topology of the charge distribution of H3SiO(H)AlH3 conformers

The topologic properties of the electronic charge distribution of conformers of H₃SiO(H)AlH₃ molecule hydroxyl groups of zeolites are reported. The studied properties—total density, Laplacian density, and bond ellipticity—were evaluated at the position of the critical points of the O Si, O Al, and O H bonds, by using Hartree–Fock and second‐order Møller–Plesset levels of theory, and the STO/6‐31+G(d,p) standard basis set. For the H₃SiO(H)AlH₃ molecule, four conformers are identified. It is demonstrated that for these conformers, the total density and Laplacian density remain almost constant by effect of the rotations of the T H bonds, T=(Si, Al), around the corresponding O T bonds, respectively. However, these rotations induce sensible variations in the ellipticity at the position of the critical point of the O Al bonds, which are reflected in the OH bond distance, OH vibrational mode, and the stabilization energy of conformers. These results lead to a linear relationship between the magnitude of the bond ellipticity at the critical point of the O Al bonds and the frequency values of the OH bonds, with a correlation coefficient of r²=0.98. In addition, a good linear relationship between the ellipticity of the O Al bond and the pattern of the stabilization energy of conformers was also found. © 1999 John Wiley & Sons, Inc. Int J Quant Chem 76: 1–9, 2000     

Charge degree of freedom as a sensitive probe for fission mechanism

The role of the charge degree of freedom in the heavy-ion-induced fission was investigated by carrying out a systematic analysis of radiochemically observed charge distribution in the fission of²³⁸U with¹²C ions of the incident energy between 85 and 140 MeV, particularly in connection with the energy given to the compound system. The charge distribution was found to follow essentially identical systematics as those which govern the light-ion fission except for the extremely weak energy dependence of the most probable chargeZ _p. That is, values of the derivative ofZ _p with respect to the energy were found to be quite small, or nearly zero, in the heavy-ion fission as compared to those of the light-ion fission. According to an analysis combining the derivatives ofZ _p and fission neutron data, it was deduced that the excess energy given to the fused system was spent completely in the form of pre-scission neutrons and hence the number of post-scission neutrons remained constant as in the case of light-ion fission. The observed charge distribution was reproduced under the conditions that the relaxation of the charge degree of freedom be very fast and that the separation between the two potential fragments at the moment when the charge degree of freedom has been frozen is determined by usingViola's systematics on the fragment kinetic energy.     

Probe—detektor-anordnungen zur Kernstrahlungsmessung für Analytische Zwecke

The “analytical power” of detection systems is investigated, considering typical arrangements in analytical terms. From N atoms of interest in a sample Z counts are drawn: Z=R N (R registration yield). Crude data ZM contain also background U generated by interferences: ZM=Z+U. Identification and separation of Z is accompanied by errors ~σ_MU^1/2 due to imperfect distinguishability and to statistical error (σ_M model inherent factor). With “selectivity”=σ_M ^- (R/R_interference)^1/2 the figure of merit is G=selectivity efficiency/interference)^1/2. Sample background dominating, “interference” or both “interference” and “efficiency” have to be cancelled. Present semiconductor spectrometry of low energy γ-quanta and of large rates is not very far from its limits. Further progress will be obtained by enhancement of high energy efficiency and reduction of natural background.      

Thiacalix[4]arenes: Extraction of palladium and the electronic structure

The extractability of palladium nitro complexes with the charge state of sulfur and oxygen atoms in thiacalix[4]arenas in the cone and 1,3-alternate conformations are compared. The results of X-ray photoelectron and X-ray emission studies indicate the presence of considerable electron density on the bridging sulfur atoms, which is due to the contribution of the sulfur 3p AO to the upper occupied MOs of molecules. A series of changes in the electron density on sulfur atoms in the order calixarene thioethers > thiacalixarenes > dialkylsulfides ((C₁₀H₂₁)₂S) > (C₆H₅)₂S not completely coincide with changes in their extrability, which can be caused by different nature and stoichiometry of the formed palladium complexes.     

Activation of CH4 and H2 molecules by cationic zirconium(IV) complexes: a DFT study

Reactions of methane and hydrogen molecules with [(η⁵-C₅H₅)₂ZrCH₃]⁺ and (η⁵-C₅H₅)₂ZrH₃]⁺ cations were studied using nonempirical density functional theory (DFT). In all cases, the reactions begin with the formation of agostic complexes between the substrate molecules and1 or2. Transformation of these intermediates into transition states when moving along the reaction coordinate requires only slight changes in the geometry. The dihydrogen molecule reacts with1 exothermically (−8.8 kcal mol⁻¹) and barrierlessly to form2 and CH₄. Exchange of σ-bonded ligands in the1−CH₄ system proceeds through a symmetric transition state with an activation energy of 15.0 kcal mol⁻¹. According to calculations, organometallic Zr^IV complexes are promising for activation of C−H and H−H bonds under mild conditions. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 12, pp. 2248–2254, December, 1999.     

In-source fragmentation technique for the production of thermalized ions

Our electrospray ionization-ion funnel-rf hexapole (ESI-IF-6P) source is designed to produce ions for threshold collision-induced dissociation (TCID) studies in a guided ion beam mass spectrometer. This ion source forms an initial distribution of Ca²⁺(H₂O) _x ions where x is 6–9. A new in-source fragmentation technique within the hexapole ion guide of the source is described, which is easy to implement and of modest machining and electrical costs, and is able to generate smaller Ca²⁺(H₂O) _x complexes, where x=2–5. Fragmentation is achieved by biasing an assembly of six 0.25 in. long electrodes that are inserted between the hexapole rods. The assembly is positioned in the high-pressure region of the source such that newly formed Ca²⁺(H₂O) _x ions undergo enough collisions to become thermalized, as verified by TCID studies. From the initial distribution of ions, fragmentation proceeds along the lowest energy pathway, which corresponds to sequential water loss for most complexes. However, the Ca²⁺(H₂O) complex cannot be formed using this method because charge separation into CaOH⁺ and H₃O⁺ becomes the lowest energy pathway from the Ca²⁺(H₂O)₂ complex. Therefore, this fragmentation technique can be used to identify the critical size complex for M²⁺(H₂O) _x systems, which we define as the complex size (x) at which charge separation becomes a lower energy pathway compared with simple ligand loss.     

Potential energy surface and kinetics of the helix–coil transition in a 33-peptide

The CHARMM force field is used to calculate 36 minima along the potential energy surface of the helix–coil conversion of Ac-A₁₄KG₃A₁₄K + 2H⁺ and to interconnect them through 35 transition states. The energy barriers are used to give the rate constants of interconversion between the conformers and the relevant kinetic equations are then solved. Fair to good agreement with the data obtained by drift time spectrometry experiments (D. T. Kaleta, M. F. Jarrold, J. Am. Chem. Soc. 125:7186, 2003) is obtained under a simple hypothesis of the initial conformer distribution. Contribution to the Fernando Bernardi Memorial Issue.     

DFT studies and AIM analysis of AlN-polycycles

The structure and properties of AlN-polycycles were studied by DFT (density functional theory) method. The results of calculations were obtained at B3LYP/6-311G(d, p) level on model species. Topological parameters such as electron density, its Laplacian, kinetic electron energy density, potential electron energy density, and total electron energy density at the ring critical points (RCP) from Bader’s ‘Atoms in molecules’ (AIM) theory were analyzed in detail. These results indicate a good correlation between ρ(3, +1), G(r), H(r), and V(r) averaged values and hardness of AlN-polycycles. The aromaticity of all molecules has been studied by nucleus-independent chemical shift. There is a linear correlation between ΣNICS(0.0)_molecule values and polarizability.