Solid state of a new flavonoid derivative DA-6034

DA-6034 is a new synthetic flavonoid known to possess anti-inflammatory activity. The objective of this work was to investigate the existence of polymorphs and pseudopolymorphs of DA-6034. Six crystal forms, one hydrate form and five solvates, of DA-6034 have been isolated by recrystallization and characterized by differential scanning calorimetry (DSC), thermogravimetric analysis (TG), and powder X-ray diffractometry (PXRD). From the DSC and TG data it was confirmed that Form 1 is monohydrate; Form 2 is DMSO solvate; Form 3 is 1/2 DMSO solvate; Form 4 is 1/2 methyl ethyl ketone solvate; Form 5 is 1.5 H₂O, 1/2 acetic acid solvate; Form 6 is 1/2 H₂O, 1/4 butanol solvate. The PXRD patterns of the six crystal forms were different respectively. In the dissolution studies in pH 6.8 ± 0.05 buffer at 37 ± 0.5 °C, the solubility of solvates was higher than that of Form 1.     

Polymorphism and phase transformation in the dimethyl sulfoxide solvate of 2,3,5,6‐tetrafluoro‐1,4‐diiodobenzene

A new polymorph (form II) is reported for the 1:1 dimethyl sulfoxide solvate of 2,3,5,6‐tetrafluoro‐1,4‐diiodobenzene (TFDIB·DMSO or C₆F₄I₂·C₂H₆SO). The structure is similar to that of a previously reported polymorph (form I) [Britton (2003). Acta Cryst. E 59 , o1332–o1333], containing layers of TFDIB molecules with DMSO molecules between, accepting I…O halogen bonds from two TFDIB molecules. Re‐examination of form I over the temperature range 300–120 K shows that it undergoes a phase transformation around 220 K, where the DMSO molecules undergo re‐orientation and become ordered. The unit cell expands by ca 0.5 Å along the c axis and contracts by ca 1.0 Å along the a axis, and the space‐group symmetry is reduced from Pnma to P2₁2₁2₁. Refinement of form I against data collected at 220 K captures the (average) structure of the crystal prior to the phase transformation, with the DMSO molecules showing four distinct disorder components, corresponding to an overlay of the 297 and 120 K structures. Assessment of the intermolecular interaction energies using the PIXEL method indicates that the various orientations of the DMSO molecules have very similar total interaction energies with the molecules of the TFDIB framework. The phase transformation is driven by interactions between DMSO molecules, whereby re‐orientation at lower temperature yields significantly closer and more stabilizing interactions between neighbouring DMSO molecules, which lock in an ordered arrangement along the shortened a axis.     

Influence of acido ligands on the structure of copper dihalide solvates with dimethyl sulfoxide and <Emphasis Type="Italic">N,N</Emphasis>-dimethylformamide

Structures of copper dihalide solvates with dimethyl sulfoxide (DMSO) and N,N-dimethylformamide (DMF) were determined by XRD single crystal analysis. The existence of two DMSO solvates with CuBr₂, but only one with CuCl₂, was attributed to a lower Cu-Br bond strength in comparison with Cu-Cl, and, as a consequence, by its easier breaking to form a bond with a solvent molecule. Fundamentally different structures of CuX₂·2DMF (X = Br, Cl) solvates are caused by different donor power of the acido ligands.     

Thermal and structural characterization of two polymorphs of the bronchodilator tulobuterol

Two polymorphs of the bronchodilator tulobuterol (2-chloro-α-[[(1,1-dimethylethyl)- amino]-methyl]benzenemethanol) with melting points differing by ~10 K were isolated and characterized by thermal analysis (HSM, TG, DSC), as well as powder and single crystal X-ray diffraction. Analysis of melting data for Forms 1 and 2 revealed a monotropic relationship, with ΔG ₀, the Gibbs free energy difference at the melting temperature of the lower melting form, less than 1 kJ mol^-1. This small difference is reconciled with known structural features in the crystals of the two forms. The hydrogen bonding capacity of the tulobuterol molecule is fully utilised in both polymorphs in forming a common trimeric unit via three strong O-H···N interactions. Consequently only weak intermolecular forces characterize the packing of the trimers in the monoclinic polymorph (Form 1, P2₁/n, Z =12) and the triclinic polymorph (Form 2, P(-1),Z =6). This revised version was published online in July 2006 with corrections to the Cover Date.     

Solvates with anomalous low melting points

Single crystals of the N,N-dimethylformamide (DMF) solvate (1:1) of flurbiprofen (FBP) were grown for the first time and characterised by X-ray diffraction, IR spectrophotometry, DSC and solution calorimetric methods. The structure may be characterised as a layer-structure, where DMF double-sheets are arranged between FBP double-sheets. The FBP and DMF molecules are linked to each other by a hydrogen bond, which is formed between the hydroxyl group of FBP and the carbonyl group of DMF. The conformation of FBP molecules in the DMF solvate differs from analogous enantiomers in the unsolvated form. The differences are discussed from the point of view of the influence of the nature of the solvent on selective crystallisation of the enantiomers. A peculiarity of the solvate is its low melting point, 37.3±0.2°C, with respect to the unsolvated phase, 113.5±0.2°C. Based on solution enthalpies of the solvated and unsolvated phases dissolved in DMF, the difference in crystal lattice energies, 9.8 kJ mol^-1, was calculated and the difference in entropies, 33 J mol^-1 K^-1 estimated. A possible mechanism explaining the low melting point of the solvate is discussed. This revised version was published online in August 2006 with corrections to the Cover Date.     

Two furan‐2,5‐dicarboxylic acid solvates crystallized from dimethylformamide and dimethyl sulfoxide

Furan‐2,5‐dicarboxylic acid (FDCA) has been ranked among the top 12 bio‐based building‐block chemicals by the Department of Energy in the US. The molecule was first synthesized in 1876, but large‐scale production has only become possible since the development of modern bio‐ and chemical catalysis techniques. The structures of two FDCA solvates, namely, FDCA dimethylformamide (DMF) disolvate, C₆H₄O₅·2C₃H₇NO, (I), and FDCA dimethyl sulfoxide (DMSO) monosolvate, C₆H₄O₅·C₂H₆OS, (II), are reported. Solvate (I) crystallizes in the orthorhombic Pbcn space group and solvate (II) crystallizes in the monoclinic P space group. In (I), hydrogen bonds form between the carbonyl O atom in DMF and a hydroxy H atom in FDCA. Whilst in (II), the O atom in one DMSO molecule hydrogen bonds with hydroxy H atoms in two FDCA molecules. Combined with intermolecular S…O interactions, FDCA molecules form a two‐dimensional network coordinated by DMSO.     

螯形主体分子的设计、包结性能及其在细辛挥发油 有效成分选择分离中的应用

设计了两种新的具有螯形骨架的主体分子反式-1,2-二苯基-1,2-苊二醇(1)和顺式-1,2-二(1'-萘基)-1,2-苊二醇(2),主体(1),(2)可与许多有机小分子化合物形成配位包合物。用IR和粉末XRD表征了主体分子(1)和(2)的包结物,用^1NMR测定了包结物的主客体分子摩尔比：(1)·DMF(1:2),(1)·DMSO(1:2),(1)·THF(1:2),(1)·二氧六环(1:1),(1)·吡啶(1:1),(2)·DMF(1:1)和(2)·DMSO(1:1)。单晶X射线衍射分析了包结物的晶体结构,(1)·DMF：空间群Pnaa,a=0.9377(1)nm,b=1.4351(1)nm,c=4.0463(3)nm;(1)·DMSO：空间群Pbcn,a=1.6278(1)nm,b=1.0751(1)nm,c=1.4980(1)nm;(2)·DMF：P2~1/n,a=0.9796(1)nm,b=1.2377(1)nm,c=2.2344(3)nm,β=93.02(1)°;游离主体(1)：空间群P1,a=1.0461(1)nm,b=1.1213(1)nm,c=1.5496(1)nm,α=81.74(1)°,β=75.71(1)°,γ=89.00(1)°;分析了主体分子的刚性和柔韧性对包结性能的影响。并研究了主体分子(1)选择分离细辛挥发油,将顺甲基异丁香酚从挥发油中分离出来。     

Solvation controlling reaction paths and gel-formation in imide derivatives

1,8-Naphthalic anhydride condenses with 4-nitro-1,2-diaminobenzene in acetic acid to give 11-nitrobenzo[d,e]benzo[2,1-a]isoquinoline-1,3-dione (1), whereas the same reaction carried out in DMF gives 2-(2-amino-4-nitrophenyl)-benzo[d,e]isoquinoline-1,3-dione (2). The condensation reaction of 1,8-naphthalic anhydride with 1-amino 3,5-benzene dicarboxylic acid leads to corresponding imide, which forms a gel in a mixed solvent such as water in DMSO. A similar compound 5-(1,3-dioxo-1,3-dihydroisoindol-2-yl)-isophthalic acid derived from phthalic anhydride forms gel in a mixed solvent of DMSO and water, whereas a crystalline solvate of DMSO with 2 could be obtained upon crystallization from DMSO. The crystal structure of this solvate is determined and its structure is compared with 2-(1,3-dioxo-1,3-dihydro-isoindol-2-yl)-benzoic acid. The latter does not form a gel in the mixed solvent and adopts an intermolecular hydrogen bonded structure.     

Morpholine adducts of Co, Ni, and Mn benzoylacetonates: isostructurality and C–H···O hydrogen bonding

Morpholine adducts of nickel(II), cobalt(II), and manganese(II) benzoylacetonates, as well as a morpholine solvate of manganese(II) benzoylacetonate, were prepared and characterized by X-ray diffraction and thermal analysis. All four compounds crystallize in the P2₁/c space group with two complex molecules per unit cell. The morpholine solvate, along with the two adduct molecules, also contains four solvent morpholine molecules in the unit cell. The non-solvate compounds are isostructural, with crystal structures comprising 2D networks formed by C–H···O hydrogen bonding between phenyl rings and morpholine oxygen atoms. The topology of these networks can be described as intersecting C₂²(24) chains forming R₄⁴(48) rings. Networks with the same topology are also present in the solvate, but they are heavily distorted due to the presence of solvent morpholine molecules. Thermogravimetric analysis shows similar behavior of the non-solvate compounds upon thermal decomposition, with three degradation steps which can be related to gradual loss of morpholine molecules and subsequent overall decomposition. Decomposition of the solvate also proceeds in several steps, the first of which can be related to loss of solvent morpholine molecules and the further steps are analogous to those in the non-solvate compounds.     

蝶形主体分子的设计、合成及其包结性能的研究

设计、合成了两种蝶形主体分子：2，5－二（三苯甲基）对苯二酚1，2，5－二（二苯甲基）对苯二酚2.1和2可与许多有机小分子形成配位包合物。用IR表征了主体分子1和2 的包结物， 用¹H NMR测定了主客体分子的摩尔比：1•DMF (1：2)，1•DMSO (1:2)，1 •吡啶 （1：2），1•环戊酮 （2：3）和2•DMF 1：2），2•DMSO （1：2），2 •THF （1：1），2•苯甲醛（1：2），2•苯乙酮 （1：2），2•2，5－己二酮 （1：1），2 •N－甲基－2－吡咯烷酮 （1：3）。单晶X-射线衍射分析了包结物2·苯甲醛的晶体结构，在分子间氢键的相互作用下晶体得以稳定。     

Trimercurated acetaldehyde as the mercuration product of ethanol. The crystal structure of (ClHg)3CCHO·DMF and (BrHg)3CCHO·DMSO

The product obtained by boiling an ethanolic solution of mercuric chloride with sodium acetate (Hofmann, 1899) has been identified as tris(chloromercuri)acetaldehyde. The analogous bromomercuri derivative is obtained by using mercuric bromide. Both compounds crystallize from DMSO of DMF solution as the one-to-one solvates. The crystal structure of (ClHg)₃CCHO·DMF (A) and (BrHg)₃CCHO·DMSO (B) has been determined by X-ray diffraction methods and refined by full-matrix least-squares to the conventional R indices of 0.087 and 0.079, respectively. The mean value of the HgC bond length is 2.09(9) Å in A and 2.04(7) Å in B.     

Trans-Effect in Kinetics of Reactions of Mixed Solvates of Cu(II) Acetate with Tetraphenyltetrabenzoporphine in Organic Solvents

The kinetics of complex formation of tetraphenyltetrabenzoporphine with Cu(II) and Zn(II) acetates is studied in individual and mixed coordinating solvents on the basis of DMSO, DMF, and Py. The substantial increase in CuAc₂ reactivity in mixed solvents is explained by the trans-effect of ligands in composition of the metal solvate sphere.     

Theoretical and experimental study of lone pair interactions in THF/chloranilic acid system

Crystallization of a multi-component molecular crystal that consists of chloranilic acid with THF as solvate afforded the general formula C₆H₂O₄Cl₂·THF. Its crystal structure is new and reveals new example of cooperative lone pair–π interactions (oxygen of THF to centroid of chloranilic distance of 3.258 Å) beside others (e.g., hydrogen bonding OH···O) with new experimental evidence of receptor/solvent as a lone pair donor. This has been supported by computational methods, mainly, DFT and RIMP2 levels of theory (?48.3 kJ/mol). In addition, several potential curve surfaces are obtained to test the strength and type of every notable interaction in the lattice.     

7‐Amino‐2‐methylsulfanyl‐1,2,4‐triazolo[1,5‐a]pyrimidine‐6‐carboxylic acid as the dimethylformamide and water monosolvates at 293 K

The molecular structure of 7‐amino‐2‐methylsulfanyl‐1,2,4‐triazolo[1,5‐a]pyrimidine‐6‐carboxylic acid is reported in two crystal environments, viz. as the dimethylformamide (DMF) monosolvate, C₇H₇N₅O₂S·C₃H₇NO, (I), and as the monohydrate, C₇H₇N₅O₂S·H₂O, (II), both at 293 (2) K. The triazolo[1,5‐a]pyrimidine molecule is of interest with respect to the possible biological activity of its coordination compounds. While the DMF solvate exhibits a layered structural arrangement through N...O hydrogen‐bonding interactions, the monohydrate displays a network of intermolecular O...O and N...O hydrogen bonds assisted by cocrystallized water molecules and weak π–π stacking interactions, leading to a different three‐dimensional supramolecular architecture. Based on results from topological analyses of the electron‐density distribution in X—H...O (X = O, N and C) regions, hydrogen‐bonding energies have been estimated from structural information only, enabling the characterization of hydrogen‐bond graph energies.     

Tautomeric polymorphism of the neuroactive inhibitor kynurenic acid

Kynurenic acid (KYN; systematic name: 4‐hydroxyquinoline‐2‐carboxylic acid, C₁₀H₇NO₃) displays a therapeutic effect in the treatment of some neurological diseases and is used as a broad‐spectrum neuroprotective agent. However, it is understudied with respect to its solid‐state chemistry and only one crystal form (α‐KYN·H₂O) has been reported up to now. Therefore, an attempt to synthesize alternative solid‐state forms of KYN was undertaken and six new species were obtained: five solvates and one salt. One of them is a new polymorph, β‐KYN·H₂O, of the already known KYN monohydrate. All crystal species were further studied by single‐crystal and powder X‐ray diffraction, thermal and spectroscopic methods. In addition to the above methods, differential scanning calorimetry (DSC), in‐situ variable‐temperature powder X‐ray diffraction and Raman microscopy were applied to characterize the phase behaviour of the new forms. All the compounds display a zwitterionic form of KYN and two different enol–keto tautomers are observed depending on the crystallization solvent used.     

The stability of inclusion compounds under heating

The thermal decomposition of three inclusion compounds: [Zn₂(camph)₂dabco]·DMF·H₂O, [Zn₂(camph)₂bipy]·3DMF·H₂O and [Zn₂(camph)₂bpe]·5DMF·H₂O was studied in the inert atmosphere. TG and DTG curves confirm multi-step decomposition process, the dehydration being the first step. Thermogravimetric data (obtained at different rates of linear heating) were processed with computer program (with ‘Model-free’ approach). Kinetic parameters of decomposition were calculated for the DMF multi-step removal, the processes are described by Avrami–Erofeev equations. The connection between the kinetic parameters and structural features of the host frameworks (ligand linker lengths and porous-free volumes) are discussed.     

Solvent exchanges among molecular compounds

Solid-solid transformations between solvates of pharmaceutical compounds are investigated under various conditions. In the case of Roxithromycin, it is shown that starting from single crystals of the acetonitrile solvate, a transformation towards the monohydrate occurs according to a cooperative mechanism. This smooth exchange of solvent probably involves a transport of matter within channels, and the comparison of crystal structures is consistent with the persistence of the main features of the 3D lattice. By contrast, starting from the DMSO solvate of Dexamethasone acetate, the transformation towards the sesquihydrated form, induced by the immersion of the DMSO solvate in water, is fully destructive and reconstructive. This occurs far-from-equilibrium and is therefore controlled by kinetic factors. The existence of an intermediate liquid phase within the particle is postulated to account for the appearance of whisker-like crystals growing first on high-energy sites of the former particle. An extended analysis of these transformations between solvates shows that they could be classified according to rules previously proposed in the case of desolvation mechanisms. This revised version was published online in July 2006 with corrections to the Cover Date.     

Three solvates of a bis‐mesoionic fluorescent yellow pigment

p‐Phenylenebis(2‐oxo‐3‐phenyl‐1,2‐dihydropyrido[1,2‐a]pyrimidin‐5‐ium‐4‐olate), C₃₄H₂₂N₄O₄, is a bis‐mesoionic yellow pigment that shows fluorescence in the solid state. During a polymorph screening, single crystals of three solvates were grown and their crystal structures determined. Solvent‐free crystals were not obtained. A solvate with N‐methylpyrrolidone (NMP) and propan‐2‐ol, C₃₄H₂₂N₄O₄·2C₅H₉NO·C₃H₈O, (Ia), and an NMP trisolvate, C₃₄H₂₂N₄O₄·3C₅H₉NO, (Ib), crystallize with pigment molecules on inversion centres. The NMP/propan‐2‐ol mixed solvate (Ia) forms O—H...O hydrogen bonds between the different solvent molecules. In both structures, at least one of the solvent molecules is disordered. A third solvate structure, C₃₄H₂₂N₄O₄·0.5C₅H₉NO·C₄H₁₀O, (Ic), was obtained by crystallization from NMP and butan‐1‐ol. In this case, there are two symmetry‐independent pigment molecules, both situated on inversion centres. The solvent molecules are heavily disordered and their contribution to the scattering was suppressed. This solvate displays a channel structure, whereas the other two solvates form layer structures.     

Syntheses and Structures of Three New Copper(II) Coordination Polymers Involving 2, 2‐(4, 6‐Dinitro‐1, 3‐phenylenedioxy)­diacetic Acid

Three copper(II) coordination polymers, namely, {[CuL(H₂O)₂] · 4H₂O}_n( 1 ), [CuL(H₂O)(DMF)]_n( 2 ), and [CuL(2, 2′‐bipy)(DMSO)] · DMSO ( 3 ) [H₂L = 2, 2′‐(4, 6‐dinitro‐1, 3‐phenyl‐enedioxy)diacetic acid] were synthesized in different solvents (H₂O, DMF, and DMSO). X‐ray single crystal diffraction studies show that both complexes 1 and 3 belong to triclinic crystal system and P$\bar{1}$ space group and complex 2 belongs to the monoclinic crystal system and P2₁/c space group. In three complexes, all the central Cu^II ions coordinate with the ligand, forming a square pyramidal configuration. Both complexes 1 and 2 show similar 1D chain‐like structure and the chains are further connected by hydrogen bonds, forming 3D frameworks. Complex 3 exhibits a 0D structure due to the introduction of the ligand 2, 2′‐bipy. In addition, the luminescence properties of these complexes were investigated.     

Beiträge zur Chemie und Struktur von Vanadylhalogeniden

Investigations on the Chemistry and Structure of Vanadyl-halogenides Aqueous solutions of VOI₂ can be prepared from VOSO₄ and BaI₂. By concentrating VOI · 3 H₂O is formed; but adducts of VOI₂ with DMSO and DMF can be isolated. The structure of [VO(DMSO)₅]I₂ was determined by X-ray single crystal techniques: Monoclinic; space group P2₁/c; a = 10.696; b = 10.877; c = 24.74 Å; ß = 109.87°; Z = 4. – Other new compounds are VO(OCH₃)Br · 3 pyr and VOBr₂ · 2 H₂O · 2 eth, which can be decomposed to VOBr₂. The structures of VOCl₂ and VOBr₂ were determined from crystal powders (space group I mmm). IR and reflection spectra (4–50 kK) and magnetic moments of all compounds were measured.