The Early Life of a Peptide Cation-Radical. Ground and Excited-State Trajectories of Electron-Based Peptide Dissociations During the First 330 Femtoseconds

We report a new approach to investigating the mechanisms of fast peptide cation-radical dissociations based on an analysis of time-resolved reaction progress by Ehrenfest dynamics, as applied to an Ala-Arg cation-radical model system. Calculations of stationary points on the ground electronic state that were carried out with effective CCSD(T)/6-311++G(3df,2p) could not explain the experimental branching ratios for loss of a hydrogen atom, ammonia, and N–C_α bond dissociation in (AR + 2H)^+●. The Ehrenfest dynamics results indicate that the ground and low-lying excited electronic states of (AR + 2H)^+● follow different reaction courses in the first 330 femtoseconds after electron attachment. The ground (X) state undergoes competing loss of N-terminal ammonia and isomerization to an aminoketyl radical intermediate that depend on the vibrational energy of the charge-reduced ion. The A and B excited states involve electron capture in the Arg guanidine and carboxyl groups and are non-reactive on the short time scale. The C state is dissociative and progresses to a fast loss of an H atom from the Arg guanidine group. Analogous results were obtained by using the B3LYP and CAM-B3LYP density functionals for the excited state dynamics and including the universal M06-2X functional for ground electronic state calculations. The results of this Ehrenfest dynamics study indicate that reaction pathway branching into the various dissociation channels occurs in the early stages of electron attachment and is primarily determined by the electronic states being accessed. This represents a new paradigm for the discussion of peptide dissociations in electron based methods of mass spectrometry.     

Isomerisation of hydrocarbon ions III–[C8H8]+·, [C8H8]2+, [C6H6]+· AND [C6H5]+ IONS

Collisional activation spectra of [C₈H₈]⁺·, [C₈H₈]²⁺, [C₆H₆]⁺· and [C₆H₅]⁺ ions from fifteen different sources are reported. Decomposing [C₈H₈]⁺· ions of ten of these precursors isomerise to a mixture of mainly the cyclooctatetraene and, to a smaller extent, the styrene structure. Three additional structures are observed with [C₈H₈]⁺· ions from the remaining precursors. [C₈H₈]^2+., [C₈H₈]⁺·, [C₆H₆]⁺· and [C₆H₅]⁺· ions mostly decompose from common structures although some exceptions are reported.     

Bond dissociations in hypervalent ammonium radicals prepared by collisional neutralization of protonated six-membered nitrogen heterocycles

Hypervalent organic ammonium radicals were generated by collisional neutralization with dimethyl disulfide of protonated 1,4-diazabicyclo[2.2.2]octane (1H⁺), N,N′-dimethylpiperazine (2H⁺) and N-methylpiperazine (3H⁺). The radicals dissociated completely on the 5.1 μs time-scale. Radical 1H^• underwent competitive N−H and N−C bond dissociations producing 1,4-diazabicyclo[2.2.2]octane and small ring fragments. Dissociations of radical 2H^• proceeded by N−H bond dissociation and ring cleavage, whereas N−CH₃ bond cleavage was less frequent. Radical 3H^• underwent N−H, N−CH₃ and N−C_ring bond cleavages followed by post-reionization dissociations of the formed cations. The pattern of bond dissociations in the hypervalent ammonium radicals derived from six-membered nitrogen heterocycles is similar to those of aliphatic ammonium radicals. © 1997 John Wiley & Sons, Ltd.     

Chlorination of charged buckyballs: reactions of C60x+ cations (x = 1–3) with Cl2, CCl4, CDCl3, CH2Cl2, and CH3Cl

The chlorination of singly and multiply charged C₆₀ cations has been investigated with the selected-ion flow tube technique. Observations are reported for the reactions of C₆₀^·+, C₆₀²⁺ and C₆₀^·3+ with Cl₂, CCl₄, CDCl₃, CH₂Cl₂ and CH₃Cl at room temperature (295 ± 2 K) in helium at a total pressure of 0.35 ± 0.02 Torr. C₆₀^·+ and C₆₀²⁺ were observed not to chlorinate, or react in any other way, with these five molecules. Chlorine also did not react with C₆₀^·3+, but bimolecular chloride transfer and electron transfer reactions, reactions that result in charge reduction/charge separation, were observed to occur with CCl₄, CDCl₃, CH₂Cl₂ and CH₃Cl. Chloride transfer was the predominant channel seen with CCl₄, CDCl₃ and CH₂Cl₂ while electron transfer dominates the reaction with CH₃Cl. These results are consistent with trends in chloride affinity and ionization energy. The reluctant chlorination of the first two charge states of C₆₀ is attributed to the energy required to distort the carbon cage upon bond formation, while the observed chloride transfer to C₆₀^·3+ is attributed to the greater electrostatic interactions with this ion.     

One‐dimensional hydrogen‐bonded structures in the 1:1 proton‐transfer compounds of 4,5‐dichlorophthalic acid with 8‐hydroxyquinoline, 8‐aminoquinoline and quinoline‐2‐carboxylic acid (quinaldic acid)

The structures of the 1:1 proton‐transfer compounds of 4,5‐dichlorophthalic acid with 8‐hydroxyquinoline, 8‐aminoquinoline and quinoline‐2‐carboxylic acid (quinaldic acid), namely anhydrous 8‐hydroxyquinolinium 2‐carboxy‐4,5‐dichlorobenzoate, C₉H₈NO⁺·C₈H₃Cl₂O₄⁻, (I), 8‐aminoquinolinium 2‐carboxy‐4,5‐dichlorobenzoate, C₉H₉N₂⁺·C₈H₃Cl₂O₄⁻, (II), and the adduct hydrate 2‐carboxyquinolinium 2‐carboxy‐4,5‐dichlorobenzoate quinolinium‐2‐carboxylate monohydrate, C₁₀H₈NO₂⁺·C₈H₃Cl₂O₄⁻·C₁₀H₇NO₂·H₂O, (III), have been determined at 130 K. Compounds (I) and (II) are isomorphous and all three compounds have one‐dimensional hydrogen‐bonded chain structures, formed in (I) through O—H...O_carboxyl extensions and in (II) through N⁺—H...O_carboxyl extensions of cation–anion pairs. In (III), a hydrogen‐bonded cyclic R₂²(10) pseudo‐dimer unit comprising a protonated quinaldic acid cation and a zwitterionic quinaldic acid adduct molecule is found and is propagated through carboxylic acid O—H...O_carboxyl and water O—H...O_carboxyl interactions. In both (I) and (II), there are also cation–anion aromatic ring π–π associations. This work further illustrates the utility of both hydrogen phthalate anions and interactive‐group‐substituted quinoline cations in the formation of low‐dimensional hydrogen‐bonded structures.     

Metastable ion studies. IV—thermochemistry and ion structures among fragmenting [C3H6]+· ions

Metastable ion peak shapes, dimensions and relative abundances have been measured for the three fragmentations [C₃H₆]⁺· → [C₃H₄]⁺· + H₂, [C₃H₆]⁺· → [C₃H₅]⁺ + H· and [C₃H₆]⁺· → [C₃H₃]⁺ + H₂ + H·. [C₃H₆]⁺· ions were derived from propene, cyclopropane, tetrahydrofuran, cyclohexanone, 2-methyl but-1-ene and cis-pent-2-ene. Activation energies for these fragmentations have been evaluated. Three daughter ion dissociations ([C₃H₅]⁺ → [C₃H₃]⁺ + H₂, [C₃H₅]⁺ → [C₃H₄]⁺· + H· and [C₃H₄]⁺· → [C₃H₃]⁺ + H·) have been similarly examined. Ion structures have been determined and the metastable energy releases have been correlated with the thermochemical data. It is concluded that the molecular ions of propene and cyclopropane become structurally indistinguishable prior to fragmentation and that differences in their metastable ion characteristics can be ascribed wholly to internal energy differences; the latter can be correlated with the photoelectron spectra of the isomers. The pathway for the consecutive fragmentation which generates the metastable ion peak (m/e 42 → m/e.39) has been shown to be It is likewise concluded that fragmentating [C₃H₆]⁺· ions generated from the various precursor molecules are also structurally indistinguishable and cannot be classified with either molecular ion of the isomeric C₃H₆ hydrocarbons.     

4‐Carboxypyridinium perchlorate 18‐crown‐6 dihydrate clathrate and 4‐carboxypyridinium tetrafluoroborate 18‐crown‐6 dihydrate clathrate

Mixtures of 4‐carboxypyridinium perchlorate or 4‐carboxypyridinium tetrafluoroborate and 18‐crown‐6 (1,4,7,10,13,16‐hexaoxacyclooctadecane) in ethanol and water solution yielded the title supramolecular salts, C₆H₆NO₂⁺·ClO₄⁻·C₁₂H₂₄O₆·2H₂O and C₆H₆NO₂⁺·BF₄⁻·C₁₂H₂₄O₆·2H₂O. Based on their similar crystal symmetries, unit cells and supramolecular assemblies, the salts are essentially isostructural. The asymmetric unit in each structure includes one protonated isonicotinic acid cation and one crown ether molecule, which together give a [(C₆H₆NO₂)(18‐crown‐6)]⁺ supramolecular cation. N—H...O hydrogen bonds between the protonated N atoms and a single O atom of each crown ether result in the 4‐carboxypyridinium cations `perching' on the 18‐crown‐6 molecules. Further hydrogen‐bonding interactions involving the supramolecular cation and both water molecules form a one‐dimensional zigzag chain that propagates along the crystallographic c direction. O—H...O or O—H...F hydrogen bonds between one of the water molecules and the anions fix the anion positions as pendant upon this chain, without further increasing the dimensionality of the supramolecular network.     

Spectroscopic detection of excited-state electron transfer in porphyrin viologen systems

Pulsed laser excitation (354.7 nm, 10 ns pulse) of a pyridyltritolylporphyrin chromophore covalently linked to a dibenzylviologen, Bz₂V²⁺, electron acceptor (porphyrin—viologen, PV²⁺) in CH₃CN leads to intramolecular electron transfer quenching of the porphyrin singlet excited state within the laser pulsewidth to reduce the linked Bz₂V²⁺ to Bz₂V^+·. Transient Bz₂V^+· can be detected directly by resonance Raman spectroscopy. The same transient features are obtained from pulsed laser excitation of a mixture of porphyrin (P) and dibenzylviologen in CH₃CN where Bz₂V²⁺ quenches the porphyrin fluorescence, establishing bimolecular excited state electron transfer quenching to yield Bz₂V^+·. Confirmation of our assignment of the transient Bz₂V^+· comes from comparison of the spectra with the resonance Raman spectrum of an authentic sample of Bz₂V^+·, and of electrochemically reduced PV²⁺ which has been spectroscopically confirmed to form PV^+·. Fluorescence lifetime determinations for PV²⁺ and P yield a rate constant for intramolecular electron transfer, k_et = 8 × 10⁷ s⁻¹, consistent with the ability to observe electron transfer within the laser pulsewidth     

Supramolecular association in proton‐transfer adducts containing benzamidinium cations. I. Four molecular salts with uracil derivatives

Four organic salts, namely benzamidinidium orotate (2,6‐dioxo‐1,2,3,6‐tetrahydropyrimidine‐4‐carboxylate) hemihydrate, C₇H₉N₂⁺·C₅H₃N₂O₄⁻·0.5H₂O (BenzamH⁺·Or⁻), (I), benzamidinium isoorotate (2,4‐dioxo‐1,2,3,4‐tetrahydropyrimidine‐5‐carboxylate) trihydrate, C₇H₉N₂⁺·C₅H₃N₂O₄⁻·3H₂O (BenzamH⁺·Isor⁻), (II), benzamidinium diliturate (5‐nitro‐2,6‐dioxo‐1,2,3,6‐tetrahydropyrimidin‐4‐olate) dihydrate, C₇H₉N₂⁺·C₄H₂N₃O₅⁻·2H₂O (BenzamH⁺·Dil⁻), (III), and benzamidinium 5‐nitrouracilate (5‐nitro‐2,4‐dioxo‐1,2,3,4‐tetrahydropyrimidin‐1‐ide), C₇H₉N₂⁺·C₄H₂N₃O₄⁻ (BenzamH⁺·Nit⁻), (IV), have been synthesized by a reaction between benzamidine (benzenecarboximidamide or Benzam) and the appropriate carboxylic acid. Proton transfer occurs to the benzamidine imino N atom. In all four acid–base adducts, the asymmetric unit consists of one tautomeric aminooxo anion (Or⁻, Isor⁻, Dil⁻ and Nit⁻) and one monoprotonated benzamidinium cation (BenzamH⁺), plus one‐half (which lies across a twofold axis), three and two solvent water molecules in (I), (II) and (III), respectively. Due to the presence of protonated benzamidine, these acid–base complexes form supramolecular synthons characterized by N⁺—H...O⁻ and N⁺—H...N⁻ (±)‐charge‐assisted hydrogen bonds (CAHB).     

An investigation of the mechanism of single and double hydrogen atom transfer reactions in alkyl benzoates by the ortho effect

Single and double hydrogen atom transfers in reactions (1) and (2) in the mass spectra of ethyl benzoate, isopropyl benzoate, and isobutyl benzoate have been investigated with reference to the ortho effect: (1) [C₆H₅CO₂R]⁺? → [C₆H₅CO₂H]⁺? (m/z 122) + (R-H); (2) [C₆H₅CO₂R]⁺? → [C₆H₅CO₂H₂]⁺ (m/z 123) + · (R-2H). It is demonstrated that the intermediate ion [C₆H₅CO₂H₂]⁺ has the protonated benzoic acid structure with the hydrogen atom on the carbonyl group.     

Benzene as a selective chemical ionization reagent gas

Dilute mixtures of C₆H₆ or C₆D₆ in He provide abundant [C₆H₆]^+· or [C₆D₆]^+· ions and small amounts of [C₆H₇]⁺ or [C₆D₇]⁺ ions as chemical ionization (CI) reagent ions. The C₆H₆ or C₆D₆ CI spectra of alkylbenzenes and alkylanilines contain predominantly M^+· ions from reactions of [C₆H₆]^+· or [C₆D₆]^+· and small amounts of MH⁺ or MD⁺ ions from reactions of [C₆H₇]⁺ or [C₆D₇]⁺. Benzene CI spectra of aliphatic amines contain M^+·, fragment ions and sample-size-dependent MH⁺ ions from sample ion-sample molecules reactions. The C₆D₆ CI spectra of substituted pyridines contain M^+· and MD⁺ ions in different ratios depending on the substituent (which alters the ionization energy of the substituted pyridine), as well as sample-size-dependent MH⁺ ions from sample ion-sample molecule reactions. Two mechanisms are observed for the formation of MD⁺ ions: proton transfer from [C₆D₆]^+· or charge transfer from [C₆D₆]^+· to give M^+·, followed by deuteron transfer from C₆D₆ to M^+·. The mechanisms of reactions were established by ion cyclotron resonance (ICR) experiments. Proton transfer from [C₆H₆]^+· or [C₆D₆]^+· is rapid only for compounds for which proton transfer is exothermic and charge transfer is endothermic. For compounds for which both charge transfer and proton transfer are exothermic, charge transfer is the almost exclusive reaction.     

Photodissociation of protonated β-diketones in the gas phase

The gas phase photodissociation spectra of four protonated β-diketones were obtained and compared with the absorption spectra of the corresponding ions in solution. Protonated 2,4-pentanedione was observed to undergo the photodissociation process [C₅H₉O₂]⁺ +hν → [CH₃CO]⁺ +C₃H₆O with a λmax at 276±10 nm compared with a solution absorption maximum at 286 nm. Protonated 2,4-hexanedione was observed to undergo the photodissociation processes [C₆H₁₁O₂]⁺ +hν → [CH₃CO]⁺ +C₄H₈O and [C₆H₁₁O₂]⁺ +hν → [C₂H₅CO]⁺ +C₃H₆O with a λmax at 279±10 nm compared with a solution absorption maximum at 288 nm. Protonated 3-methyl-2,4-pentanedione was observed to undergo the photodissociation process [C₆H₁₁O₂]⁺ +hν → [CH₃CO]⁺ +C₄H₈O with a λmax at 295±10 nm compared with a solution absorption maximum at 305 nm. Protonated 1,1,1-trifluoro-2,4-pentanedione was observed to undergo the photodissociation process [C₅H₆F₃O₂]⁺ +hν → CF₃H+[C₄H₅O₂]⁺ with a λmax at 273±10 nm compared with a solution absorption maximum at 288 nm. The [CH₃CO]⁺ and [C₂H₅CO]⁺ produced photochemically with the first three ions react to regenerate the protonated β-diketone leading to a photostationary state. Photodissociation of the protonated alkyl β-diketones is believed to occur from the protonated keto form, whereas photodissociation of protonated 1,1,1-trifluoro-2,4-pentanedione is believed to occur from the protonated enol form. Mechanisms for the observed photodissociation processes are proposed and comparisons with results from related techniques are presented.     

Synthesis,Crystal Structures,and Properties of (4,4'-Hbipy)2[Sn2(C2O4)3] and (4,4'-Hmbipy)[SnX2] (X = C2O42–, m = 2; X = Cl,m = 0; bipy = bipyridine)

Three new tin coordination compounds (4,4'-Hbipy)₂[Sn₂(C₂O₄)₃] ( 1 ), (4,4'-H₂bipy)[Sn(C₂O₄)₂] ( 2 ), and SnCl₂(4,4'-bipy) ( 3 ) were synthesized under hydro-(solvo-)thermal conditions and their crystal structures were determined by single-crystal X-ray diffraction. Compound 1 exhibits a ionic structure based on discrete [4,4'-Hbipy]⁺ cations and [Sn₂(C₂O₄)₃]^2– anions. These two units are linked via N–H ··· O hydrogen bonds to form a pseudo-one-dimensional zigzag hydrogen-bonded chain. In compound 2 , four-coordinate Sn atoms form monomeric tin dioxalato complexes, which are connected to the doubly protonated [4,4'-H₂bipy]²⁺ cations through N–H ··· O hydrogen bonded to give a one-dimensional zigzag hydrogen-bonded chain. Compound 3 forms a three-dimensional hydrogen-bonded network, in which ¹_∞[SnCl₂(4,4'-bipy)] linear chains are interconnected to each other by C–H ··· Cl hydrogen bonding. The solid-state UV/Vis/NIR diffuse reflectance spectroscopy shows that three compounds are broadband semiconductors. The thermogravimetric analysis evidences the thermal stability of the three compounds up to 175, 201, and 246 °C, respectively.     

Intermolecular complexes of nido-C<Subscript>2</Subscript>B<Subscript>3</Subscript>H<Subscript>7</Subscript> with HF and LiH molecules: the theoretical studies,bonding properties and natural bond orbital (NBO) analysis

The changes in stabilization energy upon the formation of intermolecular hydrogen, dihydrogen and lithium bond complexes between C₂B₃H₇, LiH and HF have been investigated using MP2 method with aug-cc-pVDZ basis set. The interaction of HF with nido-C₂B₃H₇ could occur through the formation of B–H^?δ···^+δH–F, C–H^+δ···F^?δ–H and B–C···H–F classical and non-classical hydrogen bonds. The B–C bonds in backbone of the C₂B₃H₇ as electron donor interact with σ* orbital of HF as electron acceptor. Also interaction of LiH with nido-C₂B₃H₇ resulted in B–C···Li–H and B–H···LiH lithium bonds as well as C–H···H–Li dihydrogen bond complexes. In some of these complexes, LiH interacts with B–C bonds. Results are indicating that more stable complexes belong to interaction of HF and LiH with backbone of the nido-C₂B₃H₇. The AIM and NBO methods were used to analyze the intermolecular interactions; also the electron density at the bond critical point and the charge transfer of obtained complexes were studied.     

Isobutane chemical ionization mass spectra of unsaturated alcohols

Analysis of the isobutane chemical ionization mass spectra of hexenols, cyclohexenols and various syn/anti pairs of bicyclic and tricyclic homoallylic alcohols shows that: (i) the spectra of the allylic alcohols are dominated by [M + H – H₂O]⁺ and [M + C₄H₉–H₂O]⁺ ions and contain traces of [M + H]⁺ ions; (ii) [M + H]⁺ ions are prominent in the spectra of acyclic and certain cyclic homoallylic alcohols; and (iii) [M + H]⁺ ions dominate the spectra of other acyclic unsaturated alcohols. The [M + H]⁺ ions may result from either: (a) protonation of the hydroxyl group, followed by a very rapid intramolecular proton transfer from the protonated hydroxyl group to the carbon–carbon double bond or internal solvation of the protonated hydroxyl group by the carbon–carbon double bond; and/or (b) direct protonation of the carbon–carbon double bond with significant internal solvation of the resulting carbocation by the hydroxyl group, which may lead to carbon–oxygen bond formation to give a protonated cyclic ether. The consequences of placing various geometric constraints on the possible intramolecular interactions between the hydroxyl group and the carbon–carbon double bond in unsaturated alcohols are explored.     

Mass spectrometric monitoring of oxidation of aliphatic C6–C8 hydrocarbons and ethanol in low pressure oxygen and air plasmas

Experimental and theoretical studies on the oxidation of saturated hydrocarbons (n‐hexane, cyclohexane, n‐heptane, n‐octane and isooctane) and ethanol in 28 Torr O₂ or air plasma generated by a hollow cathode discharge ion source were made. Ions corresponding to [M + 15]⁺ and [M + 13]⁺ in addition to [M ? H]⁺ and [M ? 3H]⁺ were detected as major ions where M is the sample molecule. The ions [M + 15]⁺ and [M + 13]⁺ were assigned as oxidation products, [M ? H + O]⁺ and [M ? 3H + O]⁺, respectively. By the tandem mass spectrometry analysis of [M ? H + O]⁺ and [M ? 3H + O]⁺, H₂O, olefins (and/or cycloalkanes) and oxygen‐containing compounds were eliminated from these ions. Ozone as one of the terminal products in the O₂ plasma was postulated as the oxidizing reagent. As an example, the reactions of C₆H₁₄^+? with O₂ and of C₆H₁₃⁺ (CH₃CH₂CH⁺CH₂CH₂CH₃) with ozone were examined by density functional theory calculations. Nucleophilic interaction of ozone with C₆H₁₃⁺ leads to the formation of protonated ketone, CH₃CH₂C(=OH⁺)CH₂CH₂CH₃. In air plasma, [M ? H + O]⁺ became predominant over carbocations, [M ? H]⁺ and [M ? 3H]⁺. For ethanol, the protonated acetic acid CH₃C(OH)₂⁺ (m/z 61.03) was formed as the oxidation product. The peaks at m/z 75.04 and 75.08 are assigned as protonated ethyl formate and protonated diethyl ether, respectively, and that at m/z 89.06 as protonated ethyl acetate. Copyright © 2016 John Wiley & Sons, Ltd.     

Hydro­gen bonding in proton‐transfer compounds of 5‐sulfosalicylic acid with bicyclic heteroaromatic Lewis bases

The crystal structures of quinolinium 3‐carboxy‐4‐hydroxy­benzene­sulfonate trihydrate, C₉H₈N⁺·C₇H₅O₆S⁻·3H₂O, (I), 8‐hydroxy­quinolinium 3‐carboxy‐4‐hydroxy­benzene­sulfonate monohydrate, C₉H₈NO⁺·C₇H₅O₆S⁻·H₂O, (II), 8‐amino­quinolinium 3‐carboxy‐4‐hydroxy­benzene­sulfonate dihydrate, C₉H₉N₂⁺·C₇H₅O₆S⁻·2H₂O, (III), and 2‐carboxy­quinolinium 3‐carboxy‐4‐hydroxy­benzene­sulfonate quinolinium‐2‐carboxylate, C₁₀H₈NO₂⁺·C₇H₅O₆S⁻·C₁₀H₇NO₂, (IV), four proton‐transfer compounds of 5‐sulfosalicylic acid with bicyclic heteroaromatic Lewis bases, reveal in each the presence of variously hydrogen‐bonded polymers. In only one of these compounds, viz. (II), is the protonated quinolinium group involved in a direct primary N⁺—H⋯O(sulfonate) hydrogen‐bonding interaction, while in the other hydrates, viz. (I) and (III), the water mol­ecules participate in the primary intermediate interaction. The quinaldic acid (quinoline‐2‐carboxylic acid) adduct, (IV), exhibits cation–cation and anion–adduct hydrogen bonding but no direct formal heteromolecular interaction other than a number of weak cation–anion and cation–adduct π–π stacking associations. In all other compounds, secondary interactions give rise to network polymer structures.     

2‐Amino­pyridinium–fumarate–fumaric acid (2/1/1)

The title complex, 2C₅H₇N₂⁺·C₄H₂O₄²⁻·C₄H₄O₄, contains cyclic eight‐membered hydrogen‐bonded rings involving 2‐­aminopyridinium and fumarate ions. The fumaric acid mol­ecules and fumarate ions lie on inversion centers and are linked into zigzag chains by O—H⋯O hydrogen bonds. The dihedral angle between the pyridinium ring and the hydrogen‐bonded fumarate ion is 7.60 (4)°. The fumarate anion is linked to the pyridinium cations by intermolecular N—H⋯O hydrogen bonds. The heterocycle is fully protonated, thus enabling amine–imine tautomerization.     

Chemical ionization of cyclopropyl ethers II—the nature of the alkyl group fragmentationt

Oxygen-alkyl cleavage is ruled out in the methane chemical ionization- and electron mpact-induced decomposition of cyclopropyl ethers by the finding that for trans,trans-2,3-diethylmethoxycyclopropane the [M ? C₂H₅·]+ ion is more intense than the [M ? CH₃·]+ ion. The possibility for [M + H ? C₂H₆]⁺ is discounted by comparison with the methane chemical ionization nass spectrum of tran,tran-2,3-dimethylmethoxycyclopropane. The isobutane chemical ionization nass spectrum of the diethylcyclopropyl methyl ether affords nearly exclusive electrocyclic methanol fragmentation, i.e. [M + H ? CH₃OH]⁺.     

Electron Transfer Dissociation of Photolabeled Peptides. Backbone Cleavages Compete with Diazirine Ring Rearrangements

Gas-phase conformations and electron transfer dissociations of pentapeptide ions containing the photo-Leu residue (L*) were studied. Exhaustive conformational search including molecular dynamics force-field, semi-empirical, ab initio, and density functional theory calculations established that the photo-Leu residue did not alter the gas-phase conformations of (GL*GGK? + ?2H)²⁺ and (GL*GGK-NH₂?+?H)⁺ ions, which showed the same conformer energy ranking as the unmodified Leu-containing ions. This finding is significant in that it simplifies conformational analysis of photo-labeled peptide ions. Electron transfer dissociation mass spectra of (GL*GGK? + ?2H)²⁺, (GL*GGK-NH₂?+?2H)²⁺,(GL*GGKK?+?2H)²⁺, (GL*GLK?+?2H)²⁺, and (GL*LGK?+?2H)²⁺ showed 16 %–21 % fragment ions originating by radical rearrangements and cleavages in the diazirine ring. These side-chain dissociations resulted in eliminations of N₂H₃, N₂H₄, [N₂H₅], and [NH₄O] neutral fragments and were particularly abundant in long-lived charge-reduced cation-radicals. Deuterium labeling established that the neutral hydrazine molecules mainly contained two exchangeable and two nonexchangeable hydrogen atoms from the peptide and underwent further H/D exchange in an ion–molecule complex. Electron structure calculations on the charge-reduced ions indicated that the unpaired electron was delocalized between the diazirine and amide π* electronic systems in the low electronic states of the cation-radicals. The diazirine moiety in GL*GGK-NH₂was calculated to have an intrinsic electron affinity of 1.5 eV, which was further increased by the Coulomb effect of the peptide positive charge. Mechanisms are proposed for the unusual elimination of hydrazine from the photo-labeled peptide ions.