Investigation of Acidic and Coordination Properties of Octabromo-Substituted Porphyrins in the System of 1,8-Diazabicyclo[5,4,0]unde-7-ene-Acetonitrile

Acidity and metal ion coordination are described for three porphyrin derivatives, different in their macrocycle conformation and electronic substitution effects due to bromine substitution in pyrrole rings and trifluorometyl or phenyl groups in meso-positions. Combination of these facts allows modulating both steric and electronic effects on the macrocycle π-conjugated system. The role of electronic substitution effects in the macrocycle deprotonation and metal ion complex formation is found dominating with comparable resonance and inductive contributions, whereas non-planar conformation of reactive species contributes to the reaction rates to a lesser extent. The interaction of two single-electron (a_1ue_g) and (a_2ue_g) configurations is studied as a function of non-planar distortions of the molecular structure for the three tetrapyrrole compounds. The additive influence of disturbing factors on the configuration interaction of single-electron (a_1ue_g) and (a_2ue_g) configurations in the tetrapyrrole macrocycle is demonstrated.

     

Formation of phthalocyanines deprotonated forms and their interaction with Zn Ions in the system 1,8-diazabicyclo[5.4.0]undec-7-ene-acetonitrile at 298 K

The formation of deprotonated forms of tetra(t-butyl)phthalocyanine ((H₂ tButPc) and octa(pentoxy)-phthalocyanine (H₂OAmPc) in the system acetonitrile-1,8-diazabicyclo[5.4.0]undec-7-ene (DBU) at 298 K was studied by the method of spectrophotometric titration. With increasing DBU concentration sequential formation occurs of both mono- and douby deprotonated forms. The introduction of pentoxy groups into the fused benzene rings leads to a significant decrease in the acidity of the tetrapyrrole macrocycle compared with the tert-butyl substitution. The interaction of douby deprotonated forms of the phthalocyanines with zinc diacetate leads to the formation of metal complexes, the chelation constant of the latter is shown to correlate with the acidity of NH-protons in the nucleus of the macrocycle. For the chelation of more acidic tetra(t-butyl)-phthalocyanine an equimolar concentrations of zinc diacetate is sufficient, while the less acidic octa(pentoxy)-phthalocyanine requires almost 6-fold excess.     

Porphyrins as Molecular Electronic Components of Functional Devices

The proposal that molecules can perform electronic functions in devices such as diodes, rectifiers, wires, capacitors, or serve as functional materials for electronic or magnetic memory, has stimulated intense research across physics, chemistry, and engineering for over 35 years. Because biology uses porphyrins and metalloporphyrins as catalysts, small molecule transporters, electrical conduits, and energy transducers in photosynthesis, porphyrins are an obvious class of molecules to investigate for molecular electronic functions. Of the numerous kinds of molecules under investigation for molecular electronics applications, porphyrins and their related macrocycles are of particular interest because they are robust and their electronic properties can be tuned by chelation of a metal ion and substitution on the macrocycle. The other porphyrinoids have equally variable and adjustable photophysical properties, thus photonic applications are potentiated. At least in the near term, realistic architectures for molecular electronics will require self-organization or nanoprinting on surfaces. This review concentrates on self-organized porphyrinoids as components of working electronic devices on electronically active substrates with particular emphasis on the effect of surface, molecular design, molecular orientation and matrix on the detailed electronic properties of single molecules.     

Influence of thioketo substitution on the properties of uracil and its noncovalent interactions with alkali metal ions: threshold collision-induced dissociation and theoretical studies

Experimental and theoretical studies are carried out to determine the influence of thioketo substitution on the properties of uracil and its noncovalent interactions with alkali metal ions. Bond dissociation energies of alkali metal ion-thiouracil complexes, M(+)(SU), are determined using threshold collision-induced dissociation techniques in a guided ion beam mass spectrometer, where M(+) = Li(+), Na(+), and K(+) and SU = 2-thiouracil, 4-thiouracil, 2,4-dithiouracil, 5-methyl-2-thiouracil, and 6-methyl-2-thiouracil. Ab initio electronic structure calculations are performed to determine the structures and theoretical bond dissociation energies of these complexes and provide molecular constants necessary for thermodynamic analysis of the experimental data. Theoretical calculations are also performed to examine the influence of thioketo substitution on the acidities, proton affinities, and A::SU Watson-Crick base pairing energies. In general, thioketo substitution leads to an increase in both the proton affinity and the acidity of uracil. 2-Thio substitution generally results in an increase in the alkali metal ion binding affinities but has almost no affect on the stability of the A::SU base pair. In contrast, 4-thio substitution results in a decrease in the alkali metal ion binding affinities and a significant decrease in the stability of the A::SU base pair. In addition, alkali metal ion binding is expected to lead to an increase in the stability of both single-stranded and double-stranded nucleic acids by reducing the charge on the nucleic acid in a zwitterion effect as well as through additional noncovalent interactions between the alkali metal ion and the nucleobases.     

Twelve-, fourteen- and sixteen-membered macrocyclic ligands and a study of the effect of ring size on ligand field strength

Complexes of Cr^III and Ni^II with a macrocyclic tetradendate 12-, 14- and 16-membered nitrogen donor ligand were prepared and characterized on the basis of elemental analysis, molar conductance, magnetic susceptibility measurements, i.r., electronic and e.p.r. spectra. The complexes are of the high-spin type. The effect of ring size on the Dq_(xy) value is also discussed and the field strength was found to have a maximum value for the 14-membered ring, when metal ion fits best into the cavity rather than when the metal ion is compressed by the macrocycle.     

过渡金属有机合物的取代反应

综述了有关金属有机合物取代反应的机理研究以及配体的电子效应,立体效应以及螯合效应等的因素对取代反应的影响。     

Infrared spectra of metal anthranilates

The infrared spectra of the sodium salts and the Mn(II), Co(II), Ni(II), Cu(II) and Zn(Il) chelates of anthranilic acid and 5-methyl-, 5-chloro-, 5-bromo-and 5-iodo-anthranilic acid are discussed. ¹⁵N-Labelling of sodium anthranilate and the complexes of anthranilic acid provides assignments of the ligand vibrations involving the amino group. The metal-ligand stretching frequencies (vM-N and vM-O) are assigned by observing the effects on the spectra caused by ¹⁵N-labelling, metal ion substitution and ligand substitution. The vCu-O bands are split by tetragonal distortion in the Cu(II) complex which involves elongation of the axial Cu~O bonds. The metal ion dependence of vM-N and vM-O parallels the Irving-Williams stability sequence. The ligand substituents shift vM-O in accordance with their inductive effects while vM-N exhibits a substituent dependence which is roughly the opposite of that shown by vM-O.     

Substituent Effects in S- and Se-Centered Radical Cations

The first ionization potentials of molecules XZY and 1,4-XC₆H₄ZR (X, Y are inorganic, organo- metallic, or organic substituents; Z = S, Se), as well as the energies of charge-transfer bands in the electronic spectra of tetracyanoethylene complexes of these molecules are determined by the inductive, resonance, and polarization effects of substituents X and Y. Z-Centered radical cations formed both from individual molecules in the gas phase and from those incorporated in tight radical ion pairs in solutions are closely allied in their electronic structure. The resonance parameters ⁺ _R of organosilicon, organogermanium, and organotin substituents bound to the radical cation center Z+^· were determined.     

Ferrichrome: Surprising stability of a cyclic peptide-FeIII complex revealed by mass spectrometry

Ferrichrome, a fungal siderophore that is also utilized by some bacterial species, was studied with liquid secondary ion mass spectrometry (LSIMS) and matrix-assisted laser desorption ionixation (MALDI) mass spectrometry. A strong ionic signal corresponding to a Fe^III complex was observed with LSIMS in the positive ion mode. Switching the polarity of the mass spectrometer did not necessarily result in reduction of ferric ion, although certain conditions led to appearance of a Fe^II complex signal as well. The results of the structural studies of the metal ion-cyclic peptide complex with collisionally induced dissociation allowed unambiguous identification of the chelation sites. The action of the siderophore on Fe^III was studied by in vitro chelation of ferric ion (from ferric citrate) by the iron-free ferrichrome. Effective chelation of ferric ion was compared to actions of the iron-free ferrichrome on other metal ions. Unlike LSIMS, desorption with MALDI did not form selectively molecular ions of intact ferrichrome: the spectra contained abundant peaks corresponding to the cyclic peptide itself and its nonspecific association with alkali metal ions.     

Alkali Metal Complexes of the Dipeptides PheAla and AlaPhe: IRMPD Spectroscopy

Complexes of PheAla and AlaPhe with alkali metal ions Na⁺ and K⁺ are generated by electrospray ionization, isolated in the Fourier‐transform ion cyclotron resonance (FT–ICR) ion trapping mass spectrometer, and investigated by infrared multiple‐photon dissociation (IRMPD) using light from the FELIX free electron laser over the mid‐infrared range from 500 to 1900 cm^?1. Insight into structural features of the complexes is gained by comparing the obtained spectra with predicted spectra and relative free energies obtained from DFT calculations for candidate conformers. Combining spectroscopic and energetic results establishes that the metal ion is always chelated by the amide carbonyl oxygen, whilst the C‐terminal hydroxyl does not complex the metal ion and is in the endo conformation. It is also likely that the aromatic ring of Phe always chelates the metal ion in a cation‐π binding configuration. Along with the amide CO and ring chelation sites, a third Lewis‐basic group almost certainly chelates the metal ion, giving a threefold chelation geometry. This third site may be either the C‐terminal carbonyl oxygen, or the N‐terminal amino nitrogen. From the spectroscopic and computational evidence, a slight preference is given to the carbonyl group, in an RO_aO_t chelation pattern, but coordination by the amino group is almost equally likely (particularly for K⁺PheAla) in an RO_aN_t chelation pattern, and either of these conformations, or a mixture of them, would be consistent with the present evidence. (R represents the π ring site, O_a the amide oxygen, O_t the terminal carbonyl oxygen, and N_t the terminal nitrogen.) The spectroscopic findings are in better agreement with the MPW1PW91 DFT functional calculations of the thermochemistry compared with the B3LYP functional, which seems to underestimate the importance of the cation–π interaction.     

Catalysis of the ethanolysis of aryl methyl phenyl phosphinate esters by alkali metal ions: transition state structures for uncatalyzed and metal ion-catalyzed reactions

This paper reports on a spectrophotometric kinetic study of the effects of the alkali metal ions Li+ and K+ on the ethanolysis of the aryl methyl phenyl phosphinate esters 3a-f in anhydrous ethanol at 25 degrees C. Rate data obtained in the absence and presence of complexing agents afford the second-order rate constants for the reaction of free ethoxide (k(EtO-)) and metal ion-ethoxide ion pairs (k(MOEt)). The sequence k(EtO-) < k(MOEt) is established for all the substrates, contrary to the generally observed reactivity order in nucleophilic substitution processes. The quantities deltaG(ip), deltaG(ts) and DeltaG(cat), which quantify the observed alkali metal ion effect in terms of transition state stabilization through chelation of the metal ion, give the order deltaG(ts) > deltaG(ip) for Li+ and K+. Hammett plots show significantly better correlation of rates with sigma and sigma(o) substituent constants than with sigma-, yielding moderately large rho(rho(o)) values that are consistent with a stepwise mechanism in which formation of a pentacoordinate (phosphorane) intermediate is the rate-limiting step. The range of the values of the selectivity parameter, rho(n) (= rho]/rho(eq)), 1.3-1.6, obtained for the uncatalyzed and alkali metal ion catalyzed reactions indicates that there is no significant perturbation of the transition state (TS) structure upon chelation of the metal ions. This finding is relevant to the mechanism of enzymatic phosphoryl transfer involving metal ion co-factors. The present results enable one to compare structural effects for nucleophilic reactions of several series of organophosphorus substrates. It is shown that the order of reactivity of the substrates: 4-nitrophenyl dimethyl phosphinate (2) > 3a > 4-nitrophenyl diphenyl phosphinate (1) is determined mainly by the steric effects of the alkyl/aryl substituents around the central P atom in the TS of the reaction.     

Origin of the acidity enhancement of formic acid over methanol: resonance versus inductive effects

Density functional theory calculations were employed to study the relative contribution of resonance versus inductive effects toward the 37 kcal/mol enhanced gas-phase acidity (DeltaH degrees (acid)) of formic acid (1) over methanol (2). The gas-phase acidities of formic acid, methanol, vinyl alcohol (5), and their vinylogues (6, 8, and 9) were calculated at the B3LYP/6-31+G level of theory. Additionally, acidities were calculated for the formic acid and vinyl alcohol vinylogues in which the formyl group and the vinyl group, respectively, were perpendicular to the rest of the conjugated system. Comparisons among these calculated acidities suggest that inductive effects are the predominant effects responsible for the enhanced acidity of formic acid over methanol, accounting for between roughly 62% and 65% of the total enhanced acidity; the remaining 38% to 35% of the acidity enhancement appears to be due to resonance effects. Further comparisons suggest that resonance effects are between roughly 58% and 65% of the 26 kcal/mol calculated acidity enhancement of vinyl alcohol over methanol, and the remaining 42% to 35% are due to inductive effects.     

Symmetry properties of vibrational modes in mesoporphyrin IX dimethyl ester investigated by polarization-sensitive resonance Raman and CARS spectroscopy

The symmetry properties of selected vibrational modes of mesoporphyrin IX dimethyl ester (MP-IX-DME) in solution are investigated under different electronic resonance conditions. The Raman band parameters of the macrocycle modes nu(2), nu(10), nu(11), and nu(19) are determined from a quantitative analysis of polarized spontaneous resonance Raman (RR) and polarization-sensitive (PS) multiplex coherent anti-Stokes Raman scattering (CARS) spectra obtained with pre-resonant B band and resonant Qx band excitation, respectively. Additionally, the molecular geometry and the vibrational modes of MP-IX-DME are calculated by employing density functional theory (DFT) on the B3LYP/6-31G(d) level. Both the DFT-derived structure and the Raman spectroscopic parameters of MP-IX-DME indicate minor deviations from an ideal D2h macrocycle symmetry. To assess the influence of the beta substitution pattern on the in-plane symmetry, calculated normal-mode vectors and several experimentally detected parameters, such as peak positions, depolarization ratios, and coherent phases, are analyzed. The effects of the macrocycle substitution pattern are different for the selected vibrational modes: nu(2) in particular is very sensitive to subtle perturbations of the in-plane symmetry. The considerable activity of totally symmetric vibrations observed in the PS CARS spectra of MP-IX-DME and the correlation of mode symmetries with coherent phases confirm earlier PS CARS results on octaethylporphine (OEP) acquired under the same electronic resonance conditions.     

Coordination modes of novel rhodanine azodye complexes.

The reaction products of metal(II) salts with 5-sulphamethoxazoleazo-3-phenyl-2-thioxo-4-thiazolidinone (H2L) have been characterized by elemental analyses, magnetic susceptibility, electronic, infrared and electron paramagnetic resonance spectral measurements. The spectral data suggest a square pyramidal structure for Cu(II) and Co(II) complexes and an octahedral for Ni(II) complexes. Various EPR parameters have been calculated. From the electron paramagnetic resonance and spectral data, the orbital reduction factors were calculated. In all case kperpendicular > kparallel which indicates a 2B1g ground state. These five coordinated complex of Cu(II) react further with pyridine forming six coordinate base adduct. The different modes of chelation of the ligand and stereochemistry around the metal ion are discussed.     

Kinetically-Locked Metallomacrocycle for Host-Guest Chemistry with Bulky Anions

As a robust and large molecular receptor, a kinetically-locked trinuclear Co(III) macrocycle was synthesized with bis(β-diketone) ligands having large π-panels of 9,10-diphenylanthracene moieties via a combination of Co(II)-assisted self-assembly and subsequent oxidation of the metal centers. The X-ray structure revealed that the macrocycle had a discrete nanocavity of more than 300 ų, which was surrounded by three anthracenyl panels in the middle. As the macrocycle has three cationic centres on each metal ion and a large cavity, it acts as a guest receptor for sodium tetraphenylborate. The binding constant was estimated to be 4.0×10⁻² M⁻¹ from ¹H NMR titration experiments, whereas no interaction was observed between the macrocycle and potassium 1-adamantanecarboxylate.     

Correlations of substituent parameters with the carbonyl stretching force constant in arenetricarbonylchromium complexes

Correlations are established between selected substituent parameters (σ_I,σ_P, σ_R^P,σ_P^O,σ_R^O) and the carbonyl stretching force constant, k(CO), for 28 mono and poly-substituted tricarbonylchromium-complexed arene compounds. On the basis of the statistical results it is concluded that the overall electronic substituent effect transmitted to the carbonyl groups involves both mesomeric and inductive mechanisms. Within the restricted domain, including substituent group and benzene ring, transmission proceeds largely by resonance, with a minor inductive (through-bond and field) effect operative in the same domain. Further transmission from the substituted arene ring to the chromium atom predominantly involves an inductive mechanism. This result, in support of existing literature data, suggests appreciable participation of the ring carbon σ framework in the metal—ring bond formation.     

Ratiometric and turn-on monitoring for heavy and transition metal ions in aqueous solution with a fluorescent peptide sensor

A novel fluorescent peptide sensor containing tryptophan (donor) and dansyl fluorophore (acceptor) was synthesized for monitoring heavy and transition metal (HTM) ions on the basis of metal ion binding motif (Cys-X-X-X-Cys). The peptide probe successfully exhibited a turn on and ratiometric response for several heavy metal ions such as Hg²⁺, Cd²⁺, Pb²⁺, Zn²⁺, and Ag⁺ in aqueous solution. The enhancements of emission intensity were achieved in the presence of the HTM ions by fluorescent resonance energy transfer (FRET) and chelation enhanced fluorescence (CHEF) effects. The detection limits of the sensor for Cd²⁺, Pb²⁺, Zn²⁺, and Ag⁺ were lower than the EPA's drinking water maximum contaminant levels (MCL). We described the fluorescent enhancement, binding affinity, and detection limit of the peptide probe for HTM ions.     

Tris(triazolyl) calix[6]arene-based zinc and copper funnel complexes: imidazole-like or pyridine-like? A comparative study

Huisgen dipolar cycloaddition leads straightforwardly to new funnel complexes based on the calix[6]arene macrocycle bearing three functionalized triazoles as coordinating units at the small rim. Coordination to Zn(II) and Cu(I) cations was studied using (1)H NMR and IR spectroscopies and cyclic voltammetry. The nature of the substituents on the triazole ring affects the behavior of the ligands and their coordinating ability and controls the host-guest properties of the metal receptors for exogenous substrates. Depending on their substitution pattern but also on the metal ion and the guest ligand, the triazole-based systems behave either imidazole-like or pyridine-like. The ease of preparation and the versatility of 1,4-disubstituted-1,2,3-triazoles with tunable steric and electronic properties make them promising candidates for further applications from biology to materials.     

Fabrication of chemically modified carbon paste electrode based on functionalized biopolymer for potentiometric determination of Al (III) ion in real water and pharmaceutical samples

Carbon paste electrode modified with Carboxymethyl chitosan-graft-poly(1-cyanoethanoyl-4-acryloyl-thiosemcarbazide)copolymers(CMCS-PCEATS) as ionophore was constructed for potentiometric determination of aluminum (III) and the chelation between the ionophore and the aluminum (III) ions at the electrode surface was characterized using SEM, EDX, and IR analysis. Thermal stability of the prepared electrode before and after chelation with the metal ion was investigated. The highest performance was obtained with the electrode modified with 10 mg of the prepared copolymers plasticized with TCP (electrode I). Under the optimized provision, the electrode I shows Nernstian slope of 19.9?±?0.36 mV decade^??1 over the concentration range from 1.0?×?10^??6 to 1.0?×?10^??2 mol L^??1 with a detection limit of 1.0?×?10^??6 mol L^??1 and pH ranges from 3 to 8. The paste is enough stable for 37 days without any detected change in the potential. The proposed method is more potent in determination of Al(III) in both real water and pharmaceutical samples potentiometrically. The results obtained agreed with those obtained with spectrophotometer and inductive coupled plasma (ICP).     

Investigation of benzimidazoles. III—transmission of the substituent effects in 2-substituted 1-methylbenzimidazoles studied by 13C nuclear magnetic resonance

The influence of substituents on the ¹³C NMR chemical shifts of 2-substituted 1-methylbenzimidazoles has been investigated. The electronic effects of the substituents are transmitted to C-4 and C-7 mainly by the resonance mechanism, and to C-5, C-6 and N-CH₃, by approximately equal contributions of the resonance and inductive components. A critical analysis of the share in the transmission of substituent effects through the ‘pyridine-type’ and ‘pyrrole-type’ nitrogen atoms is given.