Smart DNA Hydrogel Integrated Nanochannels with High Ion Flux and Adjustable Selective Ionic Transport

Nanochannels based on smart DNA hydrogels as stimulus‐responsive architecture are presented for the first time. In contrast to other responsive molecules existing in the nanochannel in monolayer configurations, the DNA hydrogels are three‐dimensional networks with space negative charges, the ion flux and rectification ratio are significantly enhanced. Upon cyclic treatment with K⁺ ions and crown ether, the DNA hydrogel states could be reversibly switched between less stiff and stiff networks, providing the gating mechanism of the nanochannel. Based on the architecture of DNA hydrogels and pH stimulus, cation or anion transport direction could be precisely controlled and multiple gating features are achieved. Meanwhile, G‐quadruplex DNA in the hydrogels might be replaced by other stimulus‐responsive DNA molecules, peptides, or proteins, and thus this work opens a new route for improving the functionalities of nanochannel by intelligent hydrogels.     

Molecular Ionics in Supramolecular Assemblies with Channel Structures Containing Lithium Ions

A novel trilithium compound, Li₃[B(C₆H₄O₂){O(CH₂CH₂O)₃CH₃}₂][N(SO₂CF₃)₂]₂ ( 1 ‐2.0), with solid‐state ionic conductivity was synthesized. The crystal structure of 1 ‐2.0 consists of the one‐dimensional ionic conduction paths. The paths were afforded as a result of the self‐assembled stacking of the component molecules of 1 ‐2.0 with channel structures containing lithium ions. In this supramolecule, one lithium ion holds the component molecules in specific positions to construct a supramolecular structure with thermally stable ionic conduction paths and the others behave as carrier ions exhibiting selective lithium‐ion conductivity. Owing to the existence of both roles for the lithium ions, this electrolyte shows selective lithium‐ion conductivity.     

Structural Design of Ionic Conduction Paths in Molecular Crystals for Selective and Enhanced Lithium Ion Conduction

The molecular crystals [Li{N(SO₂CF₃)₂}{C₆H₄(OCH₃)₂}₂] and [Li{N(SO₂CF₃)₂}{C₆F₂H₂(OCH₃)₂}₂] with solid‐state lithium ion conductivity have been synthesized by the addition of two equivalents of 1,2‐dimethoxybenzene or 1,2‐difluoro‐4,5‐dimethoxybenzene to Li{N(SO₂CF₃)₂}, respectively. Single‐crystal X‐ray diffraction analysis revealed the formation of ionic conduction paths with an ordered arrangement of lithium ions in these crystal structures, afforded by the self‐ assembled stacking of molecular‐based channels consisting of N(SO₂CF₃)₂ anion and 1,2‐dimethoxybenzene frameworks as a result of intermolecular aromatic and hydrogen interactions. These compounds show selective lithium ion conductivity as the anions behave as a component unit of the conduction paths. The relationship between the crystal structure and ionic conductivity of the molecular crystals provides a clue to the development of novel solid electrolytes based on molecular crystals showing fast and selective lithium ion conduction.     

Efficient Gating of Ion Transport in Three‐Dimensional Metal–Organic Framework Sub‐Nanochannels with Confined Light‐Responsive Azobenzene Molecules

1D nanochannels modified with responsive molecules are fabricated to replicate gating functionalities of biological ion channels, but gating effects are usually weak because small molecular gates cannot efficiently block the large channels in the closed states. Now, 3D metal–organic framework (MOF) sub‐nanochannels (SNCs) confined with azobenzene (AZO) molecules achieve efficient light‐gating functionalities. The 3D MOFSNCs consisting of a MOF UiO66 with ca. 9–12 Å cavities connected by ca. 6 Å triangular windows work as angstrom‐scale ion channels, while confined AZO within the MOF cavities function as light‐driven molecular gates to efficiently regulate the ion flux. The AZO‐MOFSNCs show good cyclic gating performance and high on–off ratios up to 17.8, an order of magnitude higher than ratios observed in conventional 1D AZO‐modified nanochannels (1.3–1.5). This work provides a strategy to develop highly efficient switchable ion channels based on 3D porous MOFs and small responsive molecules.     

Construction of a DNA-Based Supramolecular Nanosheet That Emits Bluish-White Light from Charge-Transfer Excited States of the Nucleobases

1,ω-Inosinic acid-bearing bolaamphiphiles dI(18), dI(19), and dI(20) with a 3′-phosphorylated inosine as a universal base connected to each end of an oligomethylene chain were synthesized for the first time. Single-component self-assemblies of these bolaamphiphiles and their binary self-assemblies with salmon sperm DNA were studied by AFM; temperature-dependent UV absorption, fluorescence, and circular dichroism spectroscopy; and gel electrophoresis. The binary self-assembly of dI(20) and salmon sperm DNA (dI(20)-DNA) had a nanosheet structure with a homogeneous thickness of about 6 nm and widths of several micrometers. Interestingly, an aqueous solution of the nanosheets showed a broad absorption band originating from the charge-transfer (CT) states of the nucleobase in the long-wavelength region (>300 nm), and the molar absorptivity per nucleobase was calculated to be approximately 150 times that of single-stranded (dT20 and dA20) and double-stranded (dT20-dA20) oligonucleotides. In addition, a continuous and broad emission band originating from CT excited states of the nucleobases was observed in the visible region. These observations indicate that CT states of the nucleobases were formed and stabilized in the supramolecular nanosheet and that bluish white light was emitted from CT excited states of the nucleobases.     

Supramolecular Assemblies by Charge‐Transfer Interactions between Donor and Acceptor Chromophores

We have collated various supramolecular designs that utilize organic donor–acceptor CT complexation to generate noncovalently co‐assembled structures including fibrillar gels, micelles, vesicles, nanotubes, foldamers, conformationally restricted macromolecules, and liquid crystalline phases. Possibly inspired by nature, chemists have extensively used hydrogen bonding as a tool for supramolecular assemblies of a diverse range of abiotic building blocks. As a structural motif, CT complexes can be compared to hydrogen‐bonded complexes in its directional nature and complementarities. Additional advantages of CT interactions include wider solvent tolerance and easy spectroscopic probing. Nevertheless the major limitation is their low association constant. This article shows different strategies have evolved over the years to overcome this drawback by reinforcing the CT interactions with auxiliary noncovalent forces without hampering the alternate stacking mode. Emerging reports on promising CT complexes in organic electronics are intimately related to various supramolecular designs that one can postulate based on donor–acceptor CT interactions.     

Visualization and Quantification of Transmembrane Ion Transport into Giant Unilamellar Vesicles

Transmembrane ion transporters (ionophores) are widely investigated as supramolecular agents with potential for biological activity. Tests are usually performed in synthetic membranes that are assembled into large unilamellar vesicles (LUVs). However transport must be followed through bulk properties of the vesicle suspension, because LUVs are too small for individual study. An alternative approach is described whereby ion transport can be revealed and quantified through direct observation. The method employs giant unilamellar vesicles (GUVs), which are 20–60 μm in diameter and readily imaged by light microscopy. This allows characterization of individual GUVs containing transporter molecules, followed by studies of transport through fluorescence emission from encapsulated indicators. The method provides new levels of certainty and relevance, given that the GUVs are similar in size to living cells. It has been demonstrated using a highly active anion carrier, and should aid the development of compounds for treating channelopathies such as cystic fibrosis.     

Crystalline Supramolecular Nanofibers Based on Dehydrobenzoannulene Derivatives

Supramolecular nanofibers (SNFs) composed of low‐molecular‐weight π‐conjugated molecules exhibit attractive optical and electrical properties and are expected to be the next optoelectronic materials. In this work, five crystalline SNFs have been constructed from three dehydrobenzoannulene (DBA) derivatives. The DBAs were designed to assemble in one dimension in a strategy based on anisotropic crystal growth. The crystallinity of the SNFs allowed the molecular arrangements in the SNFs to be determined. Therefore the mechanism of construction and correlations between the molecular arrangements and optical and electrical properties could be considered. The results clearly indicate that the properties of the SNFs are affected by the chemical structures and molecular arrangements. Moreover, one of the SNFs exhibits a high charge‐carrier mobility (Σμ=0.61 cm² V^?1 s^?1) because of its crystallinity and appropriate molecular arrangement. This systematic experimental study based on a proposed strategy has provided information for improving the electrical properties of SNFs. This strategy will lead to highly functional SNFs.     

Supramolecular Formation of Li+@PCBM Fullerene with Sulfonated Porphyrins and Long‐Lived Charge Separation

Lithium‐ion‐encapsulated [6,6]‐phenyl‐C₆₁‐butyric acid methyl ester fullerene (Li⁺@PCBM) was utilized to construct supramolecules with sulfonated meso‐tetraphenylporphyrins (MTPPS^4?; M=Zn, H₂) in polar benzonitrile. The association constants were determined to be 1.8×10⁵ M ^?1 for ZnTPPS^4?/Li⁺@PCBM and 6.2×10⁴ M ^?1 for H₂TPPS^4?/Li⁺@PCBM. From the electrochemical analyses, the energies of the charge‐separated (CS) states were estimated to be 0.69 eV for ZnTPPS^4?/Li⁺@PCBM and 1.00 eV for H₂TPPS^4?/Li⁺@PCBM. Upon photoexcitation of the porphyrin moieties of MTPPS^4?/Li⁺@PCBM, photoinduced electron transfer occurred to produce the CS states. The lifetimes of the CS states were 560 μs for ZnTPPS^4?/Li⁺@PCBM and 450 μs for H₂TPPS^4?/Li⁺@PCBM. The spin states of the CS states were determined to be triplet by electron paramagnetic resonance spectroscopy measurements at 4 K. The reorganization energies (λ) and electronic coupling term (V) for back electron transfer (BET) were determined from the temperature dependence of k_BET to be λ=0.36 eV and V=8.5×10^?3 cm^?1 for ZnTPPS^4?/Li⁺@PCBM and λ=0.62 eV and V=7.9×10^?3 cm^?1 for H₂TPPS^4?/Li⁺@PCBM based on the Marcus theory of nonadiabatic electron transfer. Such small V values are the result of a small orbital interaction between the MTPPS^4? and Li⁺@PCBM moieties. These small V values and spin‐forbidden charge recombination afford a long‐lived CS state.     

多尺度分子模拟研究来自于无类囊体蓝藻的五聚体门控离子通道门控机理

五聚体门控离子通道是一个重要膜蛋白家族, 在生理学过程中起到重要作用. 我们以来自无类囊体蓝藻(Gloebacter violaceus: GLIC)的五聚体门控离子通道X-ray结构为模型, 进行总共1.05 μs的粗粒化分子模拟, 并结合原子级分子模拟方法, 观察到其离子通道的闭合和相应的四级结构扭转. 我们发现其位于跨膜区组成通道的M2螺旋通过倾斜-旋转(指向通道中心)的协调运动来完成通道闭合. 进一步分析并结合前人的实验结果, 我们提出了该离子通道门控过程的可能的“连锁反应”机理: 由单独亚基的M2螺旋前部构象变化引发, 使该亚基发生整体的构象变化, 并且将这种变化传递到了邻近的亚基, 进而带动整个通道的构象变化, 最终完成通道的闭合.     

A Panchromatic Supramolecular Fullerene‐Based Donor–Acceptor Assembly Derived from a Peripherally Substituted Bodipy–Zinc Phthalocyanine Dyad

A panchromatic 4,4‐difluoro‐4‐bora‐3a,4a‐diaza‐s‐indacene –zinc phthalocyanine conjugate (Bodipy–ZnPc) 1 was synthesized starting from phthalocyanine aldehyde 4 , via dipyrromethane 3 and dipyrromethene 2 . Conjugate 1 represents the first example in which a Bodipy unit is tethered to the peripheral position of a phthalocyanine core. Electrochemical and optical measurements provided evidence for strong electronic interactions between the Bodipy and ZnPc constituents in the ground state of 1 . When conjugate 1 is subjected to photoexcitation in the spectral region corresponding to the Bodipy absorption, the strong fluorescence characteristic of the latter subunit is effectively quenched (i.e., ≥97 %). Excitation spectral analysis confirmed that the photoexcited Bodipy and the tethered ZnPc subunits interact and that intraconjugate singlet energy transfer occurs with an efficiency of ca. 25 %. Treatment of conjugate 1 with N‐pyridylfulleropyrrolidine ( 8 ), an electron‐acceptor system containing a nitrogen ligand, gives rise to the novel electron donor–acceptor hybrid 1 ? 8 through ligation to the ZnPc center. Irradiation of the resulting supramolecular ensemble within the visible range leads to a charge‐separated Bodipy–ZnPc^.+–C₆₀^.? radical‐ion‐pair state, through a sequence of excited‐state and charge transfers, characterized by a remarkably long lifetime of 39.9 ns in toluene.