Configurationally and conformationally homogeneous cyclic n-aryl sulfimides—IV : Synthesis,configuration and stereochemistry of the rearrangement of 1,3-di-thiane-1-N-p-chlorophenylimides

1,3-Dithiane-1-N-p-chlorophenylimides (1,4-9) were prepared and their configuration and conformation was determined by ¹H and ¹³C NMR. The compounds were rearranged to the corresponding 2-(2'-amino-5'-chlorophenyl)-1, 3-dithianes (1U,4U,9U). The rearrangement reactions took place with ?95% stereospecifity. The mechanism of the reaction was investigated with the aid of analogs specifically deuterated at C-2.     

Naturally-occurring acetylenic compounds and derivatives : Regio- and stereocontrolled chloroformylation of 2-(1-propynyl)thiophene and 2-phenyl-5-(1-propynyl)thiophene

2-Phenyl-5-(1-propynyl)thiophene (1), isolated from Coreopsis grandiflora, and 2-(1-propynyl)thiophene (5), an immediate precursor in the synthesis of junipal (2), were synthesized in high yield by a Pd-catalyzed reaction between propyne and 2-iodo-5-phenylthiophene (4) or 2-iodothiophene (6), respectively. Reaction of 5 with the Vilsmeier reagent derived from POCl₃ and N-methylformanilide (MFA) afforded a mixture from which it was possible to isolate (E)-3-chloro-2-methyl-3-(2-thienyl)acrolein (10) in 37.7% yield. The structure and stereochemistry of 10 was unequivocally established by X-ray diffraction of a single crystal of the 2,4-dinitrophenylhydrazone of 10. GLC analysis showed that 10 was contaminated by ca 7% with an isomer to which, on the basis of ¹H-NMR and mass spectra, the structure of (Z)-3-chloro-2-methyl-3-(2-thienyl)acrolein (11) was attributed.Contrary to what was expected from the literature, junipal (2) represented only a minor component in the reaction mixture obtained by the Vilsmeier reaction on 5.Reaction of 1 with POCl₃ and MFA afforded (44.6% yield) a (E)-3-chloro-2-methylacrolein to which the structure 15 was attributed. Compound 15 was also contaminated by ca 10% of an isomer 16, which very probably corresponded to the (Z)-stereoisomer of 15.     

Skipped diynes—VII : Stereospecific thermal isomerization of a tetraethynyldimethylenecyclobutane

1,1-Bis(t-butylethynyl)-3-t-butylchloroallene (1) dimerizes stereospecifically at ca 25° to give Z - 1 - (t - butylchloromethylene) - 2- bis(t - butylethynylmethylene) - 3 - t - butyl - 3 - chloro - 4,4 -bis(t - butylethynyl)cyclob Z-I in the solvent bis(2 - ethoxyethyl) ether. Rate data for 100° are k = 111 × 10^?6 sec^?1, ΔH^≠ = 30·8 ± 1 kcal/mole and ΔS^≠ = 15 ± 3 eu. It is proposed that the dimerization of 1 produces a bisallyl diradical in an orthogonal conformation from which conrotatory paths lead to Z-I or trans-II. The observations on this system are used to construct a useful, if simplistic, approach to rationalize or predict product distributions in reactions such as allene dimerizations, 1, 2 - dimethylenecyclobutane rearrangements, etc, which proceed through the bisallyl diradical. On the graph which connects all of the species (or on the energy surface which contains all of the species) the first products should be those which are one allowed reaction step away from a given diradical. Applications and exceptions to this concept of favored kinetic control are discussed.     

New findings in the alkylation and N-deprotection of (4S)-4-methyl-2-benzyl-2,4-dihydro-1H-pyrazino[2,1-b]quinazoline-3,6-diones

Alkyl halides behave differently to benzyl halides in C-1 alkylation of the title compounds. The syn and anti 1,4-disubstituted diastereomers thus obtained show different regioselectivity by further alkylation leading to the 1,4,4- and 1,1,4-trisubstituted compounds, respectively. Alkylation is always directed anti with respect to the bulkier substituent at C-1 or C-4. Debenzylation attempts on 2-benzyl-derivatives 1b by treatment with HCOOH and C/Pd or H₂/C–Pd/MeOH/H⁺ led to C-1 oxidised or 7,8,9,10-tetrahydro-derivatives. Deprotection of 2-p-methoxybenzyl- and 2-(2,4-dimethoxybenzyl)-derivatives with CAN and with TFA/anisole, respectively, was successful, but in the latter case epimerization at C-1 occurred.     

Conformational study on some β-phenyl-α,β-unsaturated ketones

The conformation of three (E)-β-phenyl-α,β-unsaturated ketones and their corresponding (Z)-isomers 1, 2, and 3 was established by IR and ASIS. (Z)-1 and (E)-1 have exclusively the s-trans conformation. The two isomers of 2 occur in both conformations but there is a higher s-cis to s -trans ratio with the (Z) than with the (E)-isomer. (Z)-3 appears to exist exclusively in the s-cis conformation, the (E)-isomer has a small content of the s-trans conformation. It was concluded that the ASIS for H_b, is a measure of the s-cis content of the conformational equilibrium.     

Naphthologs of overcrowded bistricyclic aromatic enes: (E)-bisbenzo[a]fluorenylidene

(E)-11H-Bisbenzo[a]fluorenylidene (E-6) was synthesized by Barton’s double extrusion diazo-thione coupling method from 11H-benzo[a]fluoren-11-thione (11) and 11-diazo-11H-benzo[a]fluorene (13). The reaction is probably thermodynamically controlled; in the event that the less stable Z -6 is also formed, it would rapidly undergo Z → E diastereomerization to give E -6. The B3LYP/6-311G(d,p) calculated diastereomerization barrier for Z -6 → E -6 is ΔG ₂₉₈ = 57.0 kJ/mol (13.6 kcal/mol). The calculated equilibrium constant K _eq(E -6 → Z -6) = 92:8 (at 298 K) is indicative of a marked diastereoselectivity of the reaction leading to E -6. The structure of E-6 was established by ¹H-NMR and ¹³C-NMR spectroscopies and by X-ray analysis. PAE E-6 crystallizes in the monoclinic space group C2/c. The unit cell of the crystal structure E -6 contains eight molecules, arranged as four pairs of enantiomers. PAE E -6 adopts a twisted conformation with the pure twist of the central C¹¹=C^11′ bond ω = 39°. The dihedral angle ν in E -6 is 60.6°, which is significantly higher than the respective dihedral angle in PAEs Z -6, 2, E -7, Z -7, 14, and 15. The large syn-pyramidalization angles at C¹¹ and C^11′ (χ = 12.6° and 14.8°) of E-6 indicates the enhanced strain in the fjord regions of the molecule. The enhanced twist is primarily attributed to the double benzo[a]annelation of the bifluorenylidene moiety at the fjord regions. The B3LYP/6-311G(d,p) calculated structure of E -6 is in a very good agreement with the experimental X-ray structure. PAE E -6 adopts a twisted conformation in solution, with the downfield chemical shift of H¹/H^1′ (8.31 ppm); H¹⁰/H^10′ (δ = 7.20 ppm) and H⁹/H^9′ (δ = 6.86 ppm) in E -6 are positioned above the planes of the opposing naphthalene rings. PAEs E -6 and Z -6 are significantly higher in energy than their corresponding benzo[b]annelated isomers E -7 and Z -7.     

Conformational analysis of methylsuccinic acid by 1H NMR spectroscopy and circular dichroism

The pH-dependence of the ¹H NMR and Circular Dichroism (CD) spectra of 2-methylsuccinic acid was investigated. Both spectra undergo dramatic changes between pH 4 and 6, where both carboxylic groups become ionized. From the coupling constants of the tertiary proton with the assigned¹ diastereotopic methylene protons, it is concluded that below pH 4 the syn-clinal (2) and above pH 6 the anti-periplanar (1) conformation of methylsuccinic acid prevail. The diesters of methylsuccinic acid also assume mainly the syn-clinal conformation (2). The pH-dependence of the CD spectra is discussed in terms of conformation and/or ionization effects.     

β‐1‐Acet­amido‐4‐O‐β‐d‐galacto­pyranosyl‐d‐gluco­pyran­ose dihydrate

The crystal structure of the title compound, C₁₄H₂₅NO₁₁·2H₂O, has been determined. The glucose and galactose residues are in a ⁴C₁ conformation. The N‐acetyl group has a Z‐anti conformation.     

Reaction of trimethylene–bisadenine with d10 divalent cations

The synthesis, spectroscopic characterisation and X-ray structure determination of Ade₂(CH₂)₃ 1, [(H-Ade)₂(CH₂)₃]Cl₂⋅H₂O 2 and the outer sphere complex [(H-Ade)₂(CH₂)₃]₂[Cd₂Cl₈(H₂O)₂]⋅4H₂O 3 are reported (Ade=adenine). An important change of conformation appears when trimethylene–bisadenine is protonated. The eclipsed and anti conformation between the two adenine moieties of 1 varies to a gauche and syn conformation for the corresponding Cl⁻ 2 and [Cd₂Cl₈(H₂O)₂]⁴⁻ 3 salts. Compound 3 presents a new dimeric [Cd₂Cl₈(H₂O)₂]⁴⁻ anion in which cadmium(II) has a distorted-octahedral co-ordination with two cis chlorine atoms bridging two cadmium atoms. The corresponding Zn(II) and Hg(II) salts have been obtained by similar procedures.     

DBU induced formation of 8-bromoguanosine dimer with three hydrogen bonds between the GG− base pairs

Upon hemideprotonation of 8-bromoguanosine (8-BrG) at the N1 position, induced by DBU, the adduct [8-BrG][8-BrG]^?[DBU–H]⁺ was formed. Slow evaporation of the 8-BrG methanol solution, in the presence of 0.5 equiv of DBU, yielded two polymorphic structures (1 and 2), where a neutral [8-BrG] (A) and N1 deprotonated, anionic 8-bromoguanosine [8-BrG]^? (B) were joined together through three intermolecular hydrogen bonds involving O6, N1 and C2–NH₂ sites. Such pairing gave planar GG^? dimers as the basic motif of crystal packing in both polymorphs. Both neutral and deprotonated guanosine molecules in the structure of 1 had the ribose units in a syn conformation. In the structure of polymorph 2, the N1 deprotonated guanosine molecule (B) retained the syn glycosidic conformation, while the non-deprotonated guanosine molecule (A) adopted the natural anti conformation of the ribose unit with respect to the nucleobase. Ribose rings revealed different puckering; only those of deprotonated molecules 1B and 2B possessed the usual C2′-endo envelope conformation. Crystal packing in both structures was guided by the highly complex H-bonded pattern. The CSD was searched for related structures, which are discussed with reference to polymorphs 1 and 2. ¹H and ¹³C NMR spectroscopic evidence is provided showing that the three H-bonded adduct [8-BrG][8-BrG]^?[DBU–H]⁺ was also formed in the highly H-bond competitive DMSO solution.     

anti-Markovnikov addition of tellurium tetrachloride to trimethyl ethynyl silane

An investigation of the TeCl₄ interaction with trimethyl ethynyl silane 1 in CHCl₃ has shown that anti-Markovnikov adduct [Z-1-(trimethylsilyl)-2-chlorovinyl]tellurium trichloride is formed as the only product. In time, it is hydrolyzed to give [Z-1-(trimethylsilyl)-2-chlorovinyl]tellurium (hydroxy) dichloride which, in turn, is dehydrated to afford bis[(2-chloro-1-trimethyl-silylvinyl)dichlorotellurium]oxide. These data revealed that the reaction studied was the first example of anti-Markovnikov syn-addition of TeCl₄ to terminal acetylenes. A computed simulation of the TeCl₄ interaction with ethynyl silane 1 in a gas state using PES method did not reveal dominating orientation of the addition but showed the conditions at which anti-Markovnikov addition can occur and which were probably met in carrying out the reaction in CHCl₃.     

Solvent- and temperature-controlled inversion of π-facial selectivity in the 1,2-cycloaddition of singlet oxygen to hydroxyphenyl-substituted cyclohexadihydrofurans

Singlet-oxygenation of 3-hydroxyphenyl-substituted dihydrofurans fused with a cyclohexane 1a?c exclusively gave the corresponding syn/anti-stereoisomeric mixtures of dioxetanes 2a?c. The syn/anti-π-facial selectivity in the 1,2-cycloaddition of singlet oxygen (¹O₂) was found to be remarkably sensitive to the solvent as well as the reaction temperature. In fact, the solvent effect was so conspicuous that inversion of the syn/anti-π-facial selectivity was observed in different solvents, such as chloroform and toluene. An LSER (linear solvation energy relationships) analysis suggested that the Lewis-acidity/basicity and HBD (hydrogen-bond donor)/HBA (hydrogen-bond acceptor) ability as well as dipolarity/polarizability of the solvent played an important role in this change in syn/anti-π-facial selectivity. An investigation of the temperature-dependency of the singlet-oxygenation suggested that the syn/anti-π-facial-selective 1,2-cycloaddition of ¹O₂ to 1 was a conformationally-(entropy-) controlled process.     

Revised structure of acid-catalyzed rearrangement product of aucubigenin

The ¹³C NMR spectrum of 6, the acid-catalyzed rearrangement product of aucubigenin, has led to a critical re-examination of its ¹HNMR data and instead of the previous structure 6a, the definitive structure of the add-catalyzed rearrangement product is 1,10-anhydro, 3,4-dihydro, 4-decarbomethoxy, -3α-hydroxygardenogenin 6b.     

The cycloaddition reaction of 3,4-dimethyl-1-thio-1-phenylphosphole with tropone

3,4-Dimethyl-1-thio-1-phenylphosphole reacts, under elevated temperatures, with tropone to give two [4+2] isomeric adducts: Endo-syn-5,6-dimethyl-3-thio-3-phenyl-3-phosphatricyclo [5.3.2.0^2,6]dodec-4,8,11-trien-10-one (1) and Endo-anti-5,6-dimethyl-3-thio-3-phenyl-3-phosphatricyclo[5.3.2.0^2,6]dodec-4,9,11-trien-8-one (2). In addition to the endo-exo,syn-anti relationship the phosphorus configuration in 1, 2 and some derivatives was also elucidated by means of NMR-shift reagents and ²J_PH coupling constants.     

Asymmetric [2,3] Wittig rearrangement of crotyl furfuryl ethers

Asymmetric Wittig rearrangement of crotyl furfuryl ethers was investigated in diastereo- and enantioselective manners. Both (2S,3Z)- and (2S,3E)-3-penten-2-yl furfuryl ethers 3 and 9 rearranged with complete chirality transfer to give the syn- and anti-isomers 4 and 10, respectively. Enantioselective Wittig rearrangement of both (Z)-and (E)-crotyl furfuryl ethers 15 and 17 using butyllithium and (−)-sparteine was examined to afford (1S,2R)-1-(2-furyl)-2-methyl-3-buten-ol 16 in up to 43% ee.     

Conformational analysis of 1,1,2,2-tetraaryl-disilanes

A study of the static stereochemistry of 1,1,2,2-tetraphenyldisilane (1) and 1,1,2,2-tetramesityldisilane (2) by empirical force field calculations, X-ray diffraction, and ¹H NMR reveals that the preference for the anti conformation, exhibited by the unclamped 1,1,2,2-tetraarylethanes, is sustained in the analogous disilanes, although in somewhat attenuated form. This anti preference stands in contrast to the gauche preference of 1,1,2,2-tetraalkyldisilanes. Examination of ³J_HH coupling constants for R₂HSiSiHR₂; (R = phenyl, mesityl, 2,6-dimethyl-phenyl, t-butyl, cyclohexyl) suggests the existence of a Karplus relation for H-Si-Si-H systems.     

Syntheses and structures of mononuclear eight-coordinate Na[ErIII(Cydta)(H2O2]·5H2O (Cydta = trans-1,2-cyclohexanediaminetetraacetic acid) and binuclear nine-coordinate Na2[SmIII(Cydta)][SmIII(Cydta)(H2O)3] · 11H2O

The title complexes, Na[Er^III(Cydta)(H₂O)₂] · 5H₂O (I) and Na₂[Sm^III(Cydta)][Sm^III(Cydta)(H₂O)₃] · 11H₂O (II) (Cydta is trans-1,2-cyclohexanediaminetetraacetic acid), are prepared and characterized using IR, elemental analyses, and single-crystal X-ray diffraction techniques. Crystal I belongs to triclinic system (space group P1), which has a mononuclear eight-coordinate slightly distorted square antiprismatic conformation. The crystal data are as follows: a = 8.371(12) Å, b = 9.952(14) Å, c = 14.74(2) Å, α = 88.32(2)°, β = 76.30(2)°, γ = 87.87(2)°, V = 1192(3) ų, Z = 1, ρ = 1.835 g/cm³, μ = 3.612 mm^?1, F(000) = 658, R = 0.0194, and wR = 0.0520 for 4130 observed reflections with I≥2σ(I). Crystal II belongs to monoclinic system (space group P2₁/n), which has the binuclear nine-coordinate structure with tricapped trigonal prismatic conformation for Sm(1) and the pseudomonocapped square antiprismatic conformation for Sm(2). The crystal data are as follows: a = 12.283(6) Å, b = 15.626(7) Å, c = 25.875(12) Å, β = 97.962(7)°, V = 4919(4) ų, Z = 4, ρ = 1.717 g/cm³, μ = 2.476 mm^?1, F(000) = 2536, R = 0.0781, and wR = 0.1745 for 8554 observed reflections with I ≥ 2σ(I).     

Conformational isomerism of 1,2-bis(imidazol-1′-yl)ethane in five-coordination polymers: Influence of metal ions and m-isophthalate ligands bearing different substituents

Four novel coordination polymers, {[Zn(gauche-bime)(bdc)] · 0.5H₂O}_n (1), {[Zn(anti-bime)(HO-bdc)] · 2.5H₂O}_n (2), [Cu(gauche-bime)_0.5(anti-bime)_0.5(O₂N-bdc)]_n (4) and [Ni₂(gauche-bime)(anti-bime)(O₂N-bdc)₂(H₂O)₂]_n (5) were successfully prepared by the solvothermal reactions of 1,2-bis(imidazol-1′-yl)ethane (bime), m-isophthalic acid (H₂bdc) or its two derivatives (HO-H₂bdc = 5-hydroxyisophthalic acid, O₂N-H₂bdc = 5-nitroisophthalic acid) with different metal ions. Interestingly, bime in the four complexes exhibit different conformations owing to the synergetic influence of coexistent neutral (–H), electron-donating (–OH) or electron-withdrawing (–NO₂) groups of the dicarboxylate ligands and different metal ions. In 1 and 2, only one conformation of bime (gauche in 1 and anti in 2) is displayed, while the mixed conformations of bime (gauche:anti = 1:1) are observed in 4 and 5. At the same time, one previously reported compound {[Zn(anti-bime)(O₂N-bdc)] · H₂O}_n (3) as a comparable substance in the research system was also mentioned, in which the anti-conformation of bime was observed.