CAAC‐Based Thiele and Schlenk Hydrocarbons

Diradicals have been of tremendous interest for over a century ever since the first reports of p‐ and m‐phenylene‐bridged diphenylmethylradicals in 1904 by Thiele and 1915 by Schlenk. Reported here are the first examples of cyclic(alkyl)(amino)carbene (CAAC) analogues of Thiele's hydrocarbon, a Kekulé diradical, and Schlenk's hydrocarbon, a non‐Kekulé diradical, without using CAAC as a precursor. The CAAC analogue of Thiele's hydrocarbon has a singlet ground state, whereas the CAAC analogue of Schlenk's hydrocarbon contains two unpaired electrons. The latter forms a dimer, by an intermolecular double head‐to‐tail dimerization. This straightforward synthetic methodology is modular and can be extended for the generation of redox‐active organic compounds.     

Cover Picture: Nitrogen Analogues of o‐Quinodimethane with Unexpected non‐Kekulé Diradical Character (Chin. J. Chem. 6/2018)

The cover picture shows para‐Quinodimethane (p‐QDM) and ortho‐quinodimethane (o‐QDM) are two typical examples of Kekulé‐type delocalized diradicals. The cover picture shows that the replacement of the carbinyl centers with isoelectronic aminium centers leads to the formation of isolable nitrogen analogues of o‐QDM. In contrast to o‐QDM, the nitrogen analogues exhibit unexpected non‐Kekulé diradical characters and features open‐shell singlet ground states with thermally accessible triplet states. More details are discussed in the article by wang et al. on page 487–490.

     

Theoretical Study on the Relationship between Diradical Character and Second Hyperpolarizabilities of Four‐Membered‐Ring Diradicals Involving Heavy Main‐Group Elements

By using spin‐unrestricted density functional theory methods, the relationship between the diradical character y and the second hyperpolarizability γ (the third‐order nonlinear optical (NLO) properties at the molecular scale) for four‐membered‐ring diradical compounds, that is, cyclobutane‐1,3‐diyl, Niecke‐type diradicals, and Bertrand‐type diradicals, were investigated by focusing on the substitution effects of heavy main‐group elements as well as of donor/acceptor groups on the y and γ values. It has been found that i) γ is enhanced in the intermediate y region for these four‐membered‐ring diradicals, ii) Niecke‐type diradicals with intermediate y values, which are realized by tuning the combination of the main‐group elements involved, exhibit larger γ values than Bertrand‐type diradicals, and iii) the y value and thus γ value can be controlled by modifying the both‐end donor/acceptor substituents attached to carbon atoms in Nicke‐type C₂P₂ diradicals. These results demonstrate that four‐membered‐ring diradicals involving heavy main‐group elements exhibit high controllability of the y and γ, which indicates the potential applications of four‐membered‐ring diradicals as a building block of highly efficient open‐shell NLO materials.     

Pancake Bond Orders of a Series of π‐Stacked Triangulene Radicals

Conjugated radicals are capable of forming π‐stacking “pancake‐bonded” dimers. Members of the family of triangulene hydrocarbons, non‐Kekulé neutral multiradicals, can utilize more than one singly occupied molecular orbital (SOMO) to form multiple pancake‐bonded dimers with formal bond orders of up to five. The resulting dimer binding energies can be quite high and the intermolecular contacts rather small compared to the respective van der Waals values. The preferred configurations are driven by the large stabilization energy of overlapping SOMOs.     

Catalytic Synthesis of 8‐Membered Ring Compounds via Cobalt(III)‐Carbene Radicals

The metalloradical activation of o‐aryl aldehydes with tosylhydrazide and a cobalt(II) porphyrin catalyst produces cobalt(III)‐carbene radical intermediates, providing a new and powerful strategy for the synthesis of medium‐sized ring structures. Herein we make use of the intrinsic radical‐type reactivity of cobalt(III)‐carbene radical intermediates in the [Co^II(TPP)]‐catalyzed (TPP=tetraphenylporphyrin) synthesis of two types of 8‐membered ring compounds; novel dibenzocyclooctenes and unprecedented monobenzocyclooctadienes. The method was successfully applied to afford a variety of 8‐membered ring compounds in good yields and with excellent substituent tolerance. Density functional theory (DFT) calculations and experimental results suggest that the reactions proceed via hydrogen atom transfer from the bis‐allylic/benzallylic C?H bond to the carbene radical, followed by two divergent processes for ring‐closure to the two different types of 8‐membered ring products. While the dibenzocyclooctenes are most likely formed by dissociation of o‐quinodimethanes (o‐QDMs) which undergo a non‐catalyzed 8π‐cyclization, DFT calculations suggest that ring‐closure to the monobenzocyclooctadienes involves a radical‐rebound step in the coordination sphere of cobalt. The latter mechanism implies that unprecedented enantioselective ring‐closure reactions to chiral monobenzocyclooctadienes should be possible, as was confirmed for reactions mediated by a chiral cobalt‐porphyrin catalyst.     

Nitrogen Analogues of o‐Quinodimethane with Unexpected non‐Kekulé Diradical Character

Two‐electron oxidations of three 1,2‐di(bisphenylamino)‐benzenes afforded a class of nitrogen analogues of o‐quinodimethane. Their electronic structures in the ground state were studied by spectroscopic techniques including EPR and UV‐vis absorption spectroscopy. They have open‐shell singlet ground states with thermally accessible triplet states. One of them ( 1 ²⁺) has been crystalized and isolated. SQUID measurements, single crystal X‐ray diffraction and theoretical calculations show 1 ²⁺ has unexpected non‐Kekulé diradical character, sharply different from o‐quinodimethane.     

Solid-state nuclear magnetic resonance studies delineate the role of the protein in activation of both aromatic rings of thiamin

Knowledge of the state of ionization and tautomerization of heteroaromatic cofactors when enzyme-bound is essential for formulating a detailed stepwise mechanism via proton transfers, the most commonly observed contribution to enzyme catalysis. In the bifunctional coenzyme, thiamin diphosphate (ThDP), both aromatic rings participate in catalysis, the thiazolium ring as an electrophilic covalent catalyst and the 4'-aminopyrimidine as acid-base catalyst involving its 1',4'-iminopyrimidine tautomeric form. Two of four ionization and tautomeric states of ThDP are well characterized via circular dichroism spectral signatures on several ThDP superfamily members. Yet, the method is incapable of providing information about specific proton locations, which in principle may be accessible via NMR studies. To determine the precise ionization/tautomerization states of ThDP during various stages of the catalytic cycle, we report the first application of solid-state NMR spectroscopy to ThDP enzymes, whose large mass (160,000-250,000 Da) precludes solution NMR approaches. Three de novo synthesized analogues, [C2,C6'-(13)C(2)]ThDP, [C2-(13)C]ThDP, and [N4'-(15)N]ThDP used with three enzymes revealed that (a) binding to the enzymes activates both the 4'-aminopyrimidine (via pK(a) elevation) and the thiazolium rings (pK(a) suppression); (b) detection of a pre-decarboxylation intermediate analogue using [C2,C6'-(13)C(2)]ThDP, enables both confirmation of covalent bond formation and response in 4'-aminopyrimidine ring's tautomeric state to intermediate formation, supporting the mechanism we postulate; and (c) the chemical shift of bound [N4'-(15)N]ThDP provides plausible models for the participation of the 1',4'-iminopyrimidine tautomer in the mechanism. Unprecedented detail is achieved about proton positions on this bifunctional coenzyme on large enzymes in their active states.     

Computing the Kekulé structure count for alternant hydrocarbons

A fast computer algorithm brings computation of the permanents of sparse matrices, specifically, molecular adjacency matrices. Examples and results are presented, along with a discussion of the relationship of the permanent to the Kekulé structure count. A simple method is presented for determining the Kekulé structure count of alternant hydrocarbons. For these hydrocarbons, the square of the Kekulé structure count is equal to the permanent of the adjacency matrix. In addition, for alternant structures the adjacency matrix for N atoms can be written in such a way that only an N/2 × N/2 matrix need be evaluated. The Kekulé structure count correlates with topological indices. The inclusion of the number of cycles improves the fit. When comparing with previous results, the variance decreases 74%. The calculated standard heat of formation correlates with the logarithm of the Kekulé structure count. This heat increments 349 kJ/mol each time the Kekulé structure count increases by one order of magnitude. © 2002 Wiley Periodicals, Inc. Int J Quantum Chem, 2002     

Ordering of Kekulé structures using nonadjacent numbers

Kekulé indices and conjugated circuits are computed for 36 Kekulé structures, together with two VB quantities associated with the corresponding factor graphs (previously called submolecules). These latter quantitites are nonadjacent numbers of Hosoya and the reciprocal of the connectivity indices of Randi?. It was found that the index of Hosoya successfully orders a set of Kekulé structures belonging to the same hydrocarbon in a parallel order as their Kekulé indices and branching indices. This substantiates the relation between VB and MO theories. A code is derived by summing contributions of nonadjacent numbers in all Kekulé stuctures of a hydrocarbon. The order of the resulting codes is found to be identical to the order of the molecular properties (resonance energies, π-energies, and eigenvalues) of the hydrocarbons.     

π‐electron currents in polycyclic conjugated hydrocarbons: Coronene and its isomers having five and seven member rings

We have outlined novel graph theoretical model for computing π‐electron currents in π‐electron polycyclic conjugated hydrocarbons. We start with Kekulé valence structures of a polycyclic conjugated hydrocarbon and their conjugated circuits. To each 4n+2 conjugated circuits we assign counter clockwise current i and to each 4n conjugated circuit we assign clockwise current i. By adding the contributions from all conjugated circuits in a single Kekulé valence structure one obtains π‐electron current pattern for the particular Kekulé valence structure. By adding the conjugated circuit currents in all Kekulé valence structure one obtains the pattern of π‐electron currents for considered molecule. We report here π‐electron current patters for coronene and 17 its isomers, which have been recently considered by Balaban et al., obtained by replacing one or more pairs of peripheral benzene rings with five and seven member rings. Our results are compared with their reported π‐electron current density patters computed by ab initio molecular orbital (MO) computations and satisfactory parallelism is found between two so disparate approaches. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2012     

The Synthesis and STM/AFM Imaging of ‘Olympicene’ Benzo[cd]pyrenes

H‐Benzo[cd]pyrene (‘Olympicene′) is a polyaromatic hydrocarbon and non‐Kekulé fragment of graphene. A new synthetic method has been developed for the formation of 6H‐benzo[cd]pyrene and related ketones including the first time isolation of the unstable alcohol 6H‐benzo[cd]pyren‐6‐ol. Molecular imaging of the reaction products with scanning tunnelling microscopy (STM) and non‐contact atomic force microscopy (NC‐AFM) characterised the 6H‐benzo[cd]pyrene as well as the previously intangible and significantly less stable 5H‐benzo[cd]pyrene, the fully conjugated benzo[cd]pyrenyl radical and the ketones as oxidation products.     

Recent Advances in the Synthesis of Heterocycles and Related Substances Based on α‐Imino Rhodium Carbene Complexes Derived from N‐Sulfonyl‐1,2,3‐triazoles

In recent years, α‐imino rhodium carbene complexes derived by ring‐opening of N‐sulfonyl‐1,2,3‐triazoles have attracted much attention from organic chemists. Many transformations of these species have been reported that involve, in most cases, nucleophilic attack at the carbene center of the α‐imino rhodium carbene, facilitating the synthesis of a wide range of novel and useful compounds, particularly heterocycles. This Minireview mainly focuses on advances in the transformation of N‐sulfonyl‐1,2,3‐triazoles during the past two years.     

A Stable Trimethylenemethane Triplet Diradical Based on a Trimeric Porphyrin Fused π‐System

Trimethylenemethane (TMM) diradical is the simplest non‐Kekulé non‐disjoint molecule with the triplet ground state (ΔE_ST=+16.1 kcal mol^?1) and is extremely reactive. It is a challenge to design and synthesize a stable TMM diradical with key properties, such as actual aliphatic TMM diradical centers and the triplet ground state with a large positive ΔE_ST value, since such species provide detailed information on the electronic structure of TMM diradical. Herein we report a TMM derivative, in which the TMM segment is fused with three Ni^II meso‐triarylporphyrins, that satisfies the above criteria. The diradical shows delocalized spin density on the propeller‐like porphyrin π‐network and the triplet ground state owing to the strong ferromagnetic interaction. Despite the apparent TMM structure, the diradical can be handled under ambient conditions and can be stored for months in the solid state, thus allowing its X‐ray diffraction structural analysis.     

Theoretical studies on the decarboxylation reaction in thiamin catalysis

The conformational behavior and the stability of thiazolium and thiamin diphosphate (ThDP) adducts formed by the C2 addition of the substrates pyruvate and glyoxylate to the corresponding thiamin systems are investigated within the force-field version PIMM 90 as well as the semiempirical AM 1 and PM 3 methods. Moreover, the reaction coordinate of the decarboxylation process of the adducts with respect to the C2α(SINGLEBOND)COO⁻ bond are calculated by PM 3 and AM 1. The calculations on the key intermediates of the Breslow mechanism are performed in order to study the steric aspects of both substrate adducts that show a different pathway in the catalytic cycle. The alternative structural findings for the decarboxylation products are compared with first 6–31C * studies on the corresponding thiazolium model systems. Especially, the PM 3 calculations show that the elimination of CO₂ is favored if the arrangement of the carboxylate group is nearly perpendicular to the plane of the thiazolium ring. These results support the least-motion maximum-overlap mechanism in the enzymatic decarboxylation reaction, proposed by Kluger. The most stable conformers of the ThDP adducts and its decarboxylation products are characterized by V-like structures and the formation of a significant intramolecular hydrogen bonding under participation of the 4′-aminopyrimidine ring. © 1996 John Wiley & Sons, Inc.     

Bifunctionality of the thiamin diphosphate cofactor: assignment of tautomeric/ionization states of the 4'-aminopyrimidine ring when various intermediates occupy the active sites during the catalysis of yeast pyruvate decarboxylase

Thiamin diphosphate (ThDP) dependent enzymes perform crucial C-C bond forming and breaking reactions in sugar and amino acid metabolism and in biosynthetic pathways via a sequence of ThDP-bound covalent intermediates. A member of this superfamily, yeast pyruvate decarboxylase (YPDC) carries out the nonoxidative decarboxylation of pyruvate and is mechanistically a simpler ThDP enzyme. YPDC variants created by substitution at the active center (D28A, E51X, and E477Q) and on the substrate activation pathway (E91D and C221E) display varying activity, suggesting that they stabilize different covalent intermediates. To test the role of both rings of ThDP in YPDC catalysis (the 4'-aminopyrimidine as acid-base, and thiazolium as electrophilic covalent catalyst), we applied a combination of steady state and time-resolved circular dichroism experiments (assessing the state of ionization and tautomerization of enzyme-bound ThDP-related intermediates), and chemical quench of enzymatic reaction mixtures followed by NMR characterization of the ThDP-bound intermediates released from YPDC (assessing occupancy of active centers by these intermediates and rate-limiting steps). Results suggest the following: (1) Pyruvate and analogs induce active site asymmetry in YPDC and variants. (2) The rare 1',4'-iminopyrimidine ThDP tautomer participates in formation of ThDP-bound intermediates. (3) Propionylphosphinate also binds at the regulatory site and its binding is reflected by catalytic events at the active site 20 ? away. (4) YPDC stabilizes an electrostatic model for the 4'-aminopyrimidinium ionization state, an important contribution of the protein to catalysis. The combination of tools used provides time-resolved details about individual events during ThDP catalysis; the methods are transferable to other ThDP superfamily members.     

A New Class of Neutral Boron‐Based Diradicals Spanned by a Two‐Carbon‐Atom Bridge

A new structural class of boron‐based diradicals is prepared by Lewis base addition to and reduction of singly cyclic (alkyl)(amino)carbene (CAAC) stabilised diborylalkenes. The diradicals feature a perpendicular olefinic bridge preventing delocalization between the B(CAAC) π systems, making the coupling between the spin centres very weak. DFT calculations indicate that the compounds are ground‐state (open‐shell) singlets, with triplet states negligibly higher in energy, thus making the triplet states easily populated thermally.     

Catalytic Dibenzocyclooctene Synthesis via Cobalt(III)–Carbene Radical and ortho‐Quinodimethane Intermediates

The metalloradical activation of ortho‐benzallylaryl N‐tosyl hydrazones with [Co(TPP)] (TPP=tetraphenylporphyrin) as the catalyst enabled the controlled exploitation of the single‐electron reactivity of the redox non‐innocent carbene intermediate. This method offers a novel route to prepare eight‐membered rings, using base metal catalysis to construct a series of unique dibenzocyclooctenes through selective C_carbene?C_aryl cyclization. The desired eight‐membered‐ring products were obtained in good to excellent yields. A large variety of aromatic substituents are tolerated. The proposed reaction mechanism involves intramolecular hydrogen atom transfer (HAT) to Co^III–carbene radical intermediates followed by dissociation of an ortho‐quinodimethane that undergoes 8π cyclization. The mechanism is supported by DFT calculations, and the presence of radical‐type intermediates was confirmed by trapping experiments.     

Coumaraz‐2‐on‐4‐ylidene: Ambiphilic N‐Heterocyclic Carbenes with a Tunable Electronic Structure

Herein, a coumaraz‐2‐on‐4‐ylidene ( 1 ) as a new example of an ambiphilic N‐heterocyclic carbene, having electronic properties that can be fine‐tuned, is reported. The N‐carbamic and aryl groups on the carbene carbon center provide exceptionally high electrophilicity and nucleophilicity simultaneously to the carbene center, as evidenced by the ⁷⁷Se NMR chemical shifts of their selenoketone derivatives and the CO stretching strengths of their rhodium carbonyl complexes. Since the precursors of 1 could be synthesized from various functionalized Schiff bases in a practical and scalable manner, the electronic properties of 1 can be fine‐tuned in a quantitative and predictable way by using the Hammett σ constant of the functional groups on aryl ring. The facile electronic tuning capability of 1 may be applicable to eliciting novel properties in main‐group and transition‐metal chemistry.     

Algebraic Kekulé formulas for benzenoid hydrocarbons

By assigning two pi-electrons of CC double bonds in a Kekulé valence structure to a benzene ring if not shared by adjacent rings and one pi-electron if CC double bond is shared by two rings we arrived at numerical valence formulas for benzenoid hydrocarbons. We refer to numerical Kekulé formulas as algebraic Kekulé valence formulas to contrast them to the traditional geometrical Kekulé valences formulas. The average over all numerical Kekulé valence structures results in a single numerical structure when a benzenoid hydrocarbon molecule is considered. By ignoring numerical values the novel quantitative formula transforms into a qualitative one which can replace incorrectly used notation of pi-electron sextets to indicate aromatic benzenoids by placing inscribed circles in adjacent rings-which contradicts Clar's characterization of benzenoid hydrocarbons.