High-pressure delta-Al(OH)3 and delta-AlOOH phases and isostructural hydroxides/oxyhydroxides: new structural insights from high-resolution 1H and 27Al NMR

In order to shed light on the proton distributions and order/disorder in high-pressure delta-Al(OH)3 and delta-AlOOH phases, two-dimensional, high-resolution 1H CRAMPS (FSLG)-MAS NMR and 27Al 3QMAS NMR spectra have been obtained. For delta-Al(OH)3, the 1H CRAMPS-MAS NMR revealed two peaks with an intensity ratio close to 2:1. The 27Al MAS and 3QMAS NMR suggest a single Al site with a well-defined local structure. For delta-AlOOH, the 1H and 27Al NMR indicate the presence of a single H and Al site each. These results are consistent with crystal structures refined from X-ray diffraction. For comparison, 1H MAS and CRAMPS-MAS NMR spectra were also obtained for several other hydroxides/oxyhydroxides, including In(OH)3 and InOOH that have similar structures to delta-Al(OH)3 and delta-AlOOH, respectively. These data not only provide additional insights into the proton distributions in these important crystal structure classes but also together provide a better defined quantitative correlation between 1H chemical shift and hydrogen-bonding O...O distance.     

NMR and X-ray crystallographic studies of the conformation of a 3,4,6-triphenyl-delta-lactone.

1-Oxa-3S,4S,6R-triphenyl-2-cyclohexanone and its enantiomer were synthesized, and the structure was determined by NMR and X-ray crystallography. The X-ray crystal structure showed that the delta-lactone adopts a boat conformation in the solid. The X-ray data showed a shortened C-O bond between the carbonyl carbon and the ether oxygen, consistent with delocalization involving the ester group. (1)H and (13)C NMR measurements in acetone-d(6) showed that the lactone is biased in favor of a boat conformation. In the less polar solvent chloroform-d(1), changes in the (1)H NMR coupling constants indicate a shift in the equilibrium in favor of a less rigid twist-boat conformation. The IR absorption of the lactone carbonyl at 1740 cm(-)(1) would suggest a half-chair conformation inconsistent with the dominance of the boat forms shown by NMR and X-ray.     

Structural and variable-temperature NMR studies of 9-diisopropylphosphanylanthracenes and 9,10-bis(diisopropylphosphanyl)anthracenes and their oxidation products

The diisopropylphosphanyl-substituted anthracenes i-Pr2P(C14H9) (1a), i-Pr2P(C14H8)Br (2a), and (i-Pr2P)2(C14H8) (3a) and some of their oxidation products were prepared from 9-bromoanthracene and 9,10-dibromoanthracene, respectively. Low-temperature (1)H NMR spectra of the 9-monophosphanyl-substituted anthracenes 1a and 2a are in accordance with a staggered conformer, while above room temperature dynamic processes occur. The low-temperature NMR spectrum of the 9,10-diphosphanylanthracene 3a indicates the presence of two different rotational isomers. The rotational barrier for 1a was determined from variable-temperature (1)H NMR spectra to be 56 kJ mol(-1) (DeltaG(298K)). The crystal structure determinations show the solid-state conformers to be consistent with the prevailing conformer at low temperature.     

Hydrogen encapsulation in a silicon clathrate type I structure: Na5.5(H2)2.15Si46: synthesis and characterization

A hydrogen-encapsulated inorganic clathrate, which is stable at ambient temperature and pressure, has been prepared in high yield. Na5.5(H2)2.15Si46 is a sodium-deficient, hydrogen-encapsulated, type I silicon clathrate. It was prepared by the reaction between NaSi and NH4Br under dynamic vacuum at 300 degrees C. The Rietveld refinement of the powder X-ray diffraction data is consistent with the clathrate type I structure. The type I clathrate structure has two types of cages where the guest species, in this case Na and H2, can reside: a large cage composed of 24 Si, in which the guest resides in the 6d crystallographic position, and a smaller one composed of 20 Si, in which the guest occupies the 2a position. Solid-state 23Na, 1H, and 29Si MAS NMR confirmed the presence of both sodium and hydrogen in the clathrate cages. 23Na NMR shows that sodium completely fills the small cage and is deficient in the larger cage. The 1H NMR spectrum shows a pattern consistent with mobile hydrogen in the large cage. 29Si NMR spectrum is consistent with phase pure type I clathrate framework. Elemental analysis is consistent with the stoichiometry Na5.5(H2.15)2Si46. The sodium occupancy was also examined using spherical aberration (Cs) corrected scanning transmission electron microscopy (STEM). The high-angle annular dark-field (HAADF) STEM experimental and simulated images indicated that the Na occupancy of the large cage, 6d sites, is less than 2/3, consistent with the NMR and elemental analysis.     

High-field 1H MAS and 15N CP-MAS NMR studies of alanine tripeptides and oligomers: distinction of antiparallel and parallel beta-sheet structures and two crystallographically independent molecules

beta-Strand peptides are known to assemble into either antiparallel (AP) or parallel (P) beta-sheet forms which are very important motifs for protein folding and fibril formations occurring in silk fibroin or amyloid proteins. Well-resolved 1H NMR signals including NH protons were observed for alanine tripeptides (Ala)3 with the AP and P structures as well as (Ala)n (n = 4-6) by high-field/fast magic-angle spinning NMR. Amide NH and amino NH3+ 1H signals of (Ala)3 with the P structure were well resonated at 7.5 and 8.9 ppm, respectively, whereas they were not resolved for the AP structure. Notably, NH 1H signals of (Ala)3 and (Ala)4 taking the P structure are resonated at higher field than those of the AP structure by 1.0 and 1.1 ppm, respectively. Further, NH 15N signals of (Ala)3 with the AP structure were resonated at lower field by 2 to 5 ppm than those of (Ala)3 with the P structure. These relative 1H and 15N hydrogen bond shifts of the P structure with respect to those of the AP structure are consistent with the relative hydrogen bond lengths of the interstrand N-H...O=C bonds. Distinction between the two crystallographically independent chains present in the AP and P structures was feasible by 15N chemical shifts but not by 1H chemical shifts because of insufficient spectral resolution in the latter. Calculated 1H and 15N shielding constants by density functional theory are generally consistent with the experimental data, although some discrepancies remain depending upon the models used.     

[60]富勒烯与1, 1'-联茚的Diels-Alder加成物的合成与结构表征

通过Diels-Alder环加成反应,发现可控制反应条件,使1,1'-联茚与C60反应,并高产率地得到具有新颖结构的单加成物。用HPLC,FT-IR,FD-MS及^1HNMR,^13CNMR,HMQC,HMBC等多种波谱技术对其结构进行表征,测得它的两个sp^3杂化的桥头碳的化学位移为σC:70.91,证明生成的衍生物为[6,6]闭式环加成。^13CNMR谱共给出38个信号,表明C601,1'-联茚衍生物分子具有Cs对称性;此外,还发现单加成衍生物C601,1'-联茚热稳定性好,在四氢呋喃、丙酮等极性溶剂中溶解性好,很适合于在LB膜及光限幅性能方面的研究。     

Structure, stability, and interconversion barriers of the rotamers of cis-[Pt(II)Cl(2)(quinoline)2] and cis-[Pt(II)Cl(2)(3-bromoquinoline)(quinoline)] from X-ray crystallography, NMR spectroscopy and molecular mechanics evidence

Reported are the preparations of cis-[PtCl(2)(quinoline)(2)] and cis-[PtCl(2)(3-bromoquinoline)(quinoline)] and an investigation of the stabilities and interconversion of the rotamer forms of these complexes. Both head-to-head (HTH) and head-to-tail (HTT) rotamer forms are found in the crystal structure of cis-[PtCl(2)(quinoline)(2)]. The NOESY NMR spectrum of cis-[PtCl(2)(quinoline)(2)] in dmf-d(7) at 300 K is consistent with conformational exchange brought about by rotation about the Pt-N(quinoline) bonds. H.H nonbonded distances between H atoms of the two different quinoline ligands were determined from NOESY data, and these distances are in accord with those observed in the crystal structure and derived from molecular mechanics models. cis-[PtCl(2)(3-bromoquinoline)(quinoline)] was prepared to alleviate the symmetry-imposed absence of inter-ring H2/H2 and H8/H8 NOESY cross-peaks for cis-[PtCl(2)(quinoline)(2)]. Molecular mechanics calculations on the complexes show the HTT rotamers to be 1-2 kJ mol(-)(1) more stable than the HTH forms, consistent with the (1)H spectra where the intensities of resonances for the two forms are approximately equal. Variable-temperature (1)H NMR spectra of cis-[PtCl(2)(quinoline)(2)] in dmf-d(7) indicate a rotational energy barrier of 82 +/- 4 kJ mol(-)(1). Variable-temperature (1)H NMR spectra indicate that the Br substituent on the quinoline ring does not affect the energy barrier to interconversion between the HTT and HTH forms (79 +/- 5 kJ mol(-)(1)). The steric contribution to the rotation barrier was calculated using molecular mechanics calculations and was found to be approximately 40 kJ mol(-)(1), pointing to a possible need for an electronic component to be included in future models.     

17O magic angle spinning NMR studies of Brønsted acid sites in zeolites HY and HZSM-5

High-resolution 17O/1H double resonance NMR spectra were obtained for two zeolites, one with a low Si/Al ratio (zeolite HY) and one with a high Si/Al ratio (HZSM-5), to investigate their local structure and Br?nsted acidity. Two different oxygen signals, corresponding to Br?nsted acid sites in supercages and sodalite cages of zeolite HY were readily resolved in the two-dimensional (2-D) 1H-17O heteronuclear correlation (HETCOR) NMR spectra allowing the 17O isotropic chemical shift (deltaCS) and quadrupolar coupling parameters (quadrupolar coupling constant, QCC, and asymmetry parameter, eta) for the two oxygen atoms to be extracted. Similar experiments for HZSM-5 showed that the sites in this system are associated with a much larger distribution in NMR parameters than found in HY. 17O-1H rotational echo double resonance (REDOR) NMR was applied to probe the O-H distances in zeolites HY and HZSM-5. Weaker 17O-1H dephasing was observed for zeolite HZSM-5 in comparison to that of HY, consistent with longer O-H bonds and/or increased proton mobility.     

Lipid dynamics and protein-lipid interactions in 2D crystals formed with the β-barrel integral membrane protein VDAC1

We employ a combination of (13)C/(15)N magic angle spinning (MAS) NMR and (2)H NMR to study the structural and functional consequences of different membrane environments on VDAC1 and, conversely, the effect of VDAC1 on the structure of the lipid bilayer. MAS spectra reveal a well-structured VDAC1 in 2D crystals of dimyristoylphosphatidylcholine (DMPC) and diphytanoylphosphatidylcholine (DPhPC), and their temperature dependence suggests that the VDAC structure does not change conformation above and below the lipid phase transition temperature. The same data show that the N-terminus remains structured at both low and high temperatures. Importantly, functional studies based on electrophysiological measurements on these same samples show fully functional channels, even without the presence of Triton X-100 that has been found necessary for in vitro-refolded channels. (2)H solid-state NMR and differential scanning calorimetry were used to investigate the dynamics and phase behavior of the lipids within the VDAC1 2D crystals. (2)H NMR spectra indicate that the presence of protein in DMPC results in a broad lipid phase transition that is shifted from 19 to ~27 °C and show the existence of different lipid populations, consistent with the presence of both annular and bulk lipids in the functionally and structurally homogeneous samples.     

Studies on the conformational flexibility of α-L-rhamnose-containing oligosaccharides using 13C-site-specific labeling, NMR spectroscopy and molecular simulations: implications for the three-dimensional structure of bacterial rhamnan polysaccharides

Bacterial polysaccharides are comprised of a variety of monosaccharides, L-rhamnose (6-deoxy-L-mannose) being one of them. This sugar is often part of α-(1 → 2)- and/or α-(1 → 3)-linkages and we have therefore studied the disaccharide α-L-Rhap-(1 → 2)-α-L-Rhap-OMe to obtain information on conformational preferences at this glycosidic linkage. The target disaccharide was synthesized with (13)C site-specific labeling at C1' and at C2', i.e., in the terminal group. 2D (1)H,(13)C-HSQC-HECADE and (1)H,(13)C-J-HMBC NMR experiments, 1D (13)C and (1)H NMR spectra together with total line-shape analysis were used to extract conformationally dependent hetero- and homonuclear spin-spin coupling constants. This resulted in the determination of (2)J(C2',H1'), (3)J(C1',C1), (3)J(C1',C3), (3)J(C2',C2), (2)J(C1',C2), (1)J(C1',C2'), and (1)J(C1',H1'). These data together with previously determined J(CH) and (1)H,(1)H NOEs result in fourteen conformationally dependent NMR parameters that are available for analysis of glycosidic linkage flexibility and conformational preferences. A 100 ns molecular dynamics (MD) simulation of the disaccharide with explicit water molecules as solvent showed a major conformational state at φ(H)≈ 40° and ψ(H)≈-35°, consistent with experimental NMR data. In addition, MD simulations were carried out also for α-L-Rhap-(1 → 3)-α-L-Rhap-OMe and a rhamnan hexasaccharide. The gathered information on the oligosaccharides was used to address conformational preferences for a larger structure, a 2- and 3-linked nonasaccharide, with implications for the 3D structure of rhamnan polysaccharides, which should be regarded as flexible polymers.     

A symmetric derivative of the trimetallic nitride endohedral metallofullerene, Sc3N@C80.

The reaction of Sc3N@C80 with 6,7-dimethoxyisochroman-3-one (13C labeled) provides the first functionalized derivative of the trimetallic nitride template (TNT) endohedral metallofullerene family. The reaction mixture is dominated by a single 13C labeled monoadduct product that was purified by HPLC. The 13C labeled monoadduct was characterized by 1H NMR, 13C NMR, and MALDI-TOF mass spectrometry. The proposed structure for this novel symmetric monoadduct is consistent with derivatization at the [5,6] ring juncture on the Sc3N@C80 cage.     

新型胃动力药盐酸伊托必利的结构分析

本文以ＵＶ、ＦＴＩＲ、＾１Ｈ－ＮＭＲ、＾１３Ｃ－ＮＭＲ、ＦＡＢＭＳ等现代分析手段，对国内试制的新型胃动力药盐酸伊托必利的化学结构进行了分析鉴定。根据谱带与结构的对应关系，确证其结构与国外已报道的结构一致并对上述各种谱的谱带进行了全面的归属     

Testing computational models of hyperpolarizability in a merocyanine dye using spectroscopic and DFT methods

The structural and electronic properties of a highly solvatochromic merocyanine dye, 2-(3-cyano-5,5-dimethyl-4-(3-(1-octadecylpyridin-4(1H)-ylidene)prop-1-enyl)furan-2(5H)-ylidene)malononitrile (pyr3pi), have been investigated using UV-vis, NMR, hyper-Rayleigh scattering, and Raman spectroscopies and further interpreted using computational chemistry. Spectroscopic data indicate that pyr3pi exists in its zwitterionic form even in low polarity solvents with electronic absorption spectra showing a hypsochromic shift with an increase in solvent polarity and NMR experiments indicating an increasingly zwitterionic structure in chloroform as the temperature is lowered. Raman spectra in increasingly polar solvents show small variations of the structure that are consistent with a change toward a structure with more zwitterionic character. However, comparison of the calculated and experimental vibrational energies and intensities and comparison of NMR coupling constants with calculated bond order indicate that calculations underestimate the amount of charge separation seen in low polarity solvents. Although for this system density functional theory (DFT) calculations and the two-state model qualitatively reproduce negative solvatochromism, they fail to reproduce the trends in hyperpolarizability seen experimentally. This is attributed to solvent field DFT calculations underestimating the degree of charge separation in reaction fields representing low polarity solvents.     

Ionothermal synthesis, crystal structure and solid-state NMR spectroscopy of a new organically templated gallium oxalatophosphate: (H2TMPD)0.5[Ga3(C2O4)0.5(PO4)3] (TMPD=N,N,N',N'-tetramethyl-1,3-propanediamine)

A new organically templated gallium oxalatophosphate, (C7H20N2)0.5[Ga3(C2O4)0.5(PO4)3], has been synthesized by using a low-melting-point eutectic mixture of choline chloride and oxalic acid as a solvent and characterized by single-crystal X-ray diffraction, thermogravimetric analysis and solid-state NMR spectroscopy. It is the first example of ionothermal synthesis of organically templated metal oxalatophosphate. The structure contains double 6-ring units of the composition Ga6(PO4)6 which are connected by oxalate ligands and P-O-Ga bonds to form a 3-D framework. The charge-compensating organic ammonium cations which are disordered over two positions are located at the intersections of two types of 8-ring channels. 1H MAS and 13C CPMAS NMR studies confirm the presence of N,N,N',N'-tetramethyl-1,3-propanediammonium cation. The 71Ga and 31P MAS NMR spectra are also consistent with the crystal structure analysis results.     

Mercury(II) cyanide complexes of thioureas and the crystal structure of [(N-methylthiourea)2 Hg(CN)2]

Mercury(II) cyanide complexes of thioureas (Tu), N-methylthiourea (MeTu), and N,N′-dimethylthiourea (DmTu)) have been prepared and characterized by IR and NMR (¹H and ¹³C) spectroscopy, and the crystal structure of one of them was determined by X-ray crystallography. An upfield shift in ¹³C NMR and downfield shifts in ¹H NMR are consistent with the sulfur coordination to mercury(II). The appearance of a band around 2200 cm^?1 in IR and a resonance around 145 ppm in ¹³C NMR indicates the binding of cyanide to mercury(II). The NMR data show that the [(Thione)₂Hg(CN)₂] complexes are stable in solution and undergo no redistribution reactions. In the crystal structure of the title complex, mercury atom is coordinated to two thione sulfur atoms of MeTu and to two cyanide carbon atoms in a distorted tetrahedral mode with the bond angles in the range of 90.2(2)°–169.3(3)°.     

Conformational studies of haloperidol

The high field¹H,¹⁹F, and¹³C NMR spectra of haloperidol (HP) in CDCl₃ solution were recorded and analyzed with the aid of both homonuclear (H, H-COSY, H, H-COSYLR) and heteronuclear (H,C-COSY) chemical shift correlation experiments. Through space interactions between (1) the piperidine ring and the chlorinated phenyl ring and (2) the fluorinated phenyl ring and a methylene group were identified using phase sensitive Nuclear Overhauser and Exchange Spectroscopy (NOESY). The NOESY results are consistent with a planar structure rather than a folded version of haloperidol.     

一种新的六氢嘧啶并嘧啶二酮衍生物的核磁共振分析

采用氢谱(1H NMR)、碳谱(13C NMR)、梯度场氢氢化学位移相关谱(1H-1H COSY)、梯度场质子检测异核单量子化学位移相关谱(HSQC)、梯度场质子检测异核多重键化学位移相关谱(HMBC)等多种NMR分析方法,确证了8a-对甲氧苯基-4,5-双(对氯苯基)六氢嘧啶[4,5-d]并嘧啶-2,7(1H,3H)-二酮的结构,对它的1H和13C NMR谱信号进行了归属,为其结构鉴定提供了重要依据。     

High-resolution NMR spectra of n-alkanes penetrating into carbon fibers and of protons in carbon fibers

We present a simple NMR method for microscopically exploring the local environment in carbon fibers. The method utilizes n-alkanes as probe molecules, where the n-alkanes penetrate carbon fibers of interest. The high-resolution (1)H NMR spectra for a mixture of a carbon fiber and n-alkanes acquired by this method show a shift of the resonance line, which is due to the local structure of the fiber. The utility of this method is discussed on the basis of the (1)H NMR spectra obtained. In addition, the (1)H distribution and the local motion in the structure of the carbon fiber are revealed in view of the (1)H NMR spectra.     

Synthesis of the arachno-4-CB(8)H(12)(2)(-) monocarbaborane dianion and NMR/computational studies of the fluxional processes observed in the isoelectronic nine-vertex arachno anions: arachno-4-CB(8)H(12)(2)(-), arachno-4-CB(8)H(13)(-), and arachno-4-SB(8)H(11)(-)

The new monocarbaborane dianion, arachno-4-CB(8)H(12)(2)(-) has been synthesized from the reaction of arachno-4-CB(8)H(14) with 2 equiv of NaH in polar solvents. DFT/GIAO computations at the B3LYP/6-311G//B3LYP/6-311G level, in conjunction with 1D and 2D NMR spectroscopic studies, have confirmed that the dianion results from deprotonation of both the endo-CH and one bridging hydrogen of the parent arachno-4-CB(8)H(14). While the DFT calculations indicate that a C(1) symmetric structure is lowest in energy, the experimental solution NMR data are consistent with the dianion having a C(s)() symmetric structure, thus suggesting that it is fluxional in solution. Transition state calculations located a low-energy pathway with an activation energy of only 2.7 kcal/mol that allows the migration of the bridging hydrogen between the two enantiomeric forms of the dianion. The process can occur by a single-step, simple rotation through a transition state structure containing a -BH(2) group at the B7 boron. Averaging the calculated (11)B NMR chemical shifts of the resonances for those atoms in the static enantiomeric structures that become equivalent by this fluxional process then gives excellent agreement with the solution NMR data. Transition state calculations of the fluxional behavior previously observed for the isoelectronic arachno-4-CB(8)H(13)(-) and arachno-4-SB(8)H(11)(-) monoanions have likewise revealed related low-energy (0.3 and 5.0 kcal/mol, respectively) rearrangement mechanisms involving the simultaneous rotation of three hydrogens (two bridging and one -BH(2)) through a C(s)() symmetry transition state containing three -BH(2) groups.     

Generation and spectroscopic characterization of ruthenacyclobutane and ruthenium olefin carbene intermediates relevant to ring closing metathesis catalysis

The reaction of phosphonium alkylidenes [(H2IMes)RuCl2=CHPR3]+[A]- (R = C6H11, A = OTf or B(C6F5)4, 1-Cy; R = i-C3H7, A = ClB(C6F5)3 or OTf, 1-iPr) with 1 equiv of ethylene at -78 degrees C, in the presence of 2-3 equiv of a trapping olefin substrate, yields intermediates relevant to olefin metathesis catalytic cycles. Dimethyl cyclopent-3-ene-1,1-dicarboxylate gives solutions of a substituted ruthenacyclobutane 3 of relevance to ring closing metathesis catalysis. 1H and 13C NMR data are fully consistent with its assignment as a ruthenacyclobutane, but 1JCC values of 23 Hz for the CalphaH2-Cbeta bond and 8.5 Hz for the CalphaH-Cbeta bond point to an unsymmetrical structure in which the latter bond is more activated than the former. In contrast, trapping with acenaphthylene leads to an olefin carbene complex (6) in which the putative ruthenacyclobutane has opened; this species was also fully characterized by NMR spectroscopy and compared to related species reported previously.