封闭型硼烷B15H15^2—（D3h）的结构及稳定性的从头算分析

利用量子化学从头算方法在ＨＦ／６－３１Ｇ水平上，优化计算了带２个负电荷的封闭型硼烷Ｂ１５Ｈ１５＾２－（Ｄ３ｈ）的结构、能量和正则振动频率。该硼烷的简正振动频率计算表明，它是ＨＦ／６－３１Ｇ势能超曲面上的真实稳定点。理论预测它在化学上和动力学上都是稳定的。     

ab initio calculation study on vibrational spectra of C_2B_(10)H_(12),NB_(11)H_(12) and C_2B_(10)H_(11)Cl

Geometrical optimization and theoretical calculation of the vibrational frequencies have been performed for C2B10H12, NB11H12 and C2B10Cl by using Gaussian 92 program at 6-31G basis set. The results obtained in this work are in agreement with experimental ones. The optimized geometry and vibrational spectra show that the icosahedral configuration remains unchanged upon converting from B12H122- to the title compounds. The vibrational spectrum of C2B10H11Cl features the absence of C-Cl stretching vibration. But the (C2B10H11)-Cl vibration mode in the low frequency region is as the case for two-atom molecules if the group (C2B10H11) is considered as a pseudoatom     

Association patterns in (HF)(m)(H2O)(n) (m + n = 2-8) clusters

In an attempt to understand the phase behavior of aqueous hydrogen fluoride, the clustering in the mixture is investigated at the molecular level. The study is performed at the mPW1B95/6-31+G(d,p) level of theory. Several previous studies attempted to describe the dissociation of HF in water, but in this investigation, the focus is only on the association patterns that are present in this binary mixture. A total of 214 optimized geometries of (HF)n(H2O)m clusters, with m + n as high as 8, were investigated. For each cluster combination, several different conformations are investigated, and the preferred conformations are presented. Using multiple linear regressions, the average strengths of the four possible H-bonding interactions are obtained. The strongest H-bond interaction is reported to be the H2O...H-F interaction. The most probable distributions of mixed clusters as a function of composition are also deduced. It is found that the larger (HF)n(H2O)m clusters are favored both energetically and entropically compared to the ones that are of size m + n < or = 3. Also, the clusters with equimolar contributions of HF and H2O are found to have the strongest interactions.     

A further study on closo boron hydrides B16H2−16 (D2) and B16H16Td) using ab initio molecular orbital theory

Ab initio molecular orbital calculations of doubly negative charged B₁₆H^2?₁₆(D₂) and neutral B₁₆H₁₆(Td) have been done at the HF/6-31G level. They are predicted to be chemically and kinetically stable by vibrational analyses on their respective energy hypersurface of the HF/6-31G level. The geometrical structure of the species B₁₆H²₁₆ (D₂) was discussed.     

(Cl_2AlNH_2)_n和(H_2AlNH_2)_n(n=1～ 5)簇结构及其热力学性质

用 HF自洽场理论和密度泛函理论 (DFT)的 B3LYP方法 ,在 6 31G水平上研究了低聚物 (Cl2AlNH2)n和 (H2AlNH2)n(n=1～ 5)簇的几何构型、电子结构和聚合反应热力学性质 ,比较了两个系列化合物中化学键的强度 .结果表明 ,Cl2AlNH2和 H2AlNH2分子为 C2υ (EC)平面型结构 ,其中 Al－ N为由一个σ键和一个π键组成的双键 .(Cl2AlNH2)n和 (H2AlNH2)n(n=1～ 5)分子为 Dnh对称 ,Al－ N是典型的σ单键 .低聚物 (Cl2AlNH2)n和 (H2AlNH2)n的稳定性顺序分别为 : 3 > 2 > 4> 5 > 1和 8 > 7 > 9 > 11 > 6.     

Experimental and density functional theory and ab initio Hartree-Fock study on the vibrational spectra of 2-(4-fluorobenzylideneamino)-3-mercaptopropanoic acid

2-(4-Fluorobenzylideneamino)-3-mercaptopropanoic acid (4-FC) was synthesized through the reaction of 4-fluorobenzaldehyde and l-cysteine in refluxing EtOH. Its structure was verified by (1)H NMR, FT-IR and Raman. The ground-state geometries were optimized at B3LYP/6-31G**, B3LYP/6-31G*, HF/6-31G** and HF/6-31G* levels without symmetry constrains, respectively. The vibrational wavenumbers of 4-FC were calculated at same level. The scaled theoretical spectra using B3LYP methods, which are in a good agreement with the experimental ones, are superior to those using HF methods.     

Bis（C—p—carboranyl）（C2B10H11）2振动光谱的从头算研究

BiS（C-p-carboranyl）（C2B10H11）2是一种稠合型碳硼烷，由2个C2B10H11集团通过C-C键联结构成．Leites已发表了其实验振动光谱[1]，理论计算尚未见报道，本文对其几何优化、振动光谱及其指认进行从头计算研究．1计算方法首先在STO－3G下对标题化合物D5d与D5h两种构型进行从头算，确定D5d为其稳定构型，进而保持D5d对称性不变，并在6－31G下进行几何优化及振动光谱的理论研究，全部计算采用Gaussion－94程序，在CrayS－MP／11型计算机上完成．2结果与讨论2．1几何优化优化几何及部分实验键长列于表1．标题化合物在D5d与D5h两种…     

类硅烯H2C＝SiLiBr与RH (R＝F, OH, NH2)的插入反应

采用DFT B3LYP和QCISD方法研究了类硅烯H2C＝SiLiBr与RH (R＝F, OH, NH2)的插入反应. 在B3LYP/6- 311＋G(d,p)水平上优化了反应势能面上的驻点构型. 结果表明, H2C＝SiLiBr与HF, H2O或NH3发生插入反应的机理相同. QCISD/6-311＋＋G(d,p)//B3LYP/6-311＋G(d,p)计算的三个反应的势垒分别为148.62, 164.42和165.07 kJ&#8226;mol－1, 反应热分别为－69.63, －43.02和－28.27 kJ&#8226;mol－1. 相同条件下发生插入反应时, 反应活性都是H—F＞H—OH＞H—NH2.     

Experimental and density functional theory and ab initio Hartree-Fock study on the vibrational spectra of 2-(4-fluorobenzylideneamino)-3-(4-hydroxyphenyl) propanoic acid

2-(4-Fluorobenzylideneamino)-3-(4-hydroxyphenyl) propanoic acid (4-FT) was synthesized through the reaction of 4-fluorobenzaldehyde and l-tyrosine in refluxing EtOH. The structure of 4-FT was verified by measuring 1H NMR, FTIR and Raman. The ground-state geometries were optimized at B3LYP/6-31G**, B3LYP/6-31G*, HF/6-31G** and HF/6-31G* levels without symmetry constrains. The vibrational wavenumbers of 4-FT were calculated at same levels. The scaled spectra using B3LYP methods, which are in a good agreement with the measured spectra, are superior to those calculated using HF methods.     

Tert-butyl N-(2-bromocyclohex-2-enyl)-N-(2-furylmethyl)carbamate的结构和振动光谱

The molecular structure, conformafional stability, and vibrational frequencies of ten-butyl N-（2- bromocyclohex-2-enyl）-N-（2-furylmethyl）carbamate （TBBFC） were investigated by utilizing the Hartree-Fock （HF） and density functional theory （DFT） ab initio calculations with 6-31G ^＊ and 6-31G^＊ ＊ basis sets. The optimized bond length and angle values obtained by HF method showed the best agreement with the experimental values. Comparison of the observed and calculated fundamental vibrational frequencies indicated that B3LYP was superior to the scaled HF approach for molecular problems. Optimal uniform scaling factors calculated for the title compound are 0.899/0.904, 0.958/0.961, and 0.988/0.989 for HF, B3LYP, and BLYP （6-31G ^＊/6-31G ^＊ ＊）, respectively.     

A theoretical study on 1-(thiophen-2-yl-methyl)-2-(thiophen-2-yl)-1H-benzimidazole

The molecular geometry and vibrational frequencies of 1-(thiophen-2-yl-methyl)-2-(thiophen-2-yl)-1H-benzimidazole (C(16)H(12)N(2)S(2)) in the ground state has been calculated using the Hartree-Fock (HF) and density functional method (B3LYP) with 6-31G(d) basis set. The optimized geometric bond lengths and bond angles obtained by using HF and DFT (B3LYP) show the best agreement with the experimental data. Comparison of the observed fundamental vibrational frequencies of 1-(thiophen-2-yl-methyl)-2-(thiophen-2-yl)-1H-benzimidazole (C(16)H(12)N(2)S(2)) and calculated results by density functional B3LYP and Hartree-Fock methods indicate that B3LYP is superior to the scaled Hartree-Fock approach for molecular vibrational problems.     

2, 4-二羟基苯甲醛缩硫脲及其配合物构象及生理活性的理论研究

缩氨基硫脲类衍生物及其金属配合物是20世纪70年代初期人们认为具有潜在生物活性的化合物,具有抗菌、抗病毒及抗癌等生物活性犤1～4犦。我们曾对2,4-二羟基苯甲醛缩硫脲及其与Cu?、Zn?、Ni?的配合物的合成和生物活性进行过研究犤5犦。但由合成方法和物理表征仅能知道其一维连接顺序,而它们的构象及生理活性的理论研究尚未见报道。现代药物分子设计理论认为,药物分子(底物)的活性取决于与生物大分子(受体)活性中心作用时相匹配的活性构象。因此,探讨药物分子的构效关系(QSAR)对药物分子的生理活性研究至关重要。本文利用Gaussian98W在HF…     

Theoretical study of the structure and vibrational spectra of the Ci(2) conformation of 18-crown-6

Optimized geometries of 18-crown-6 (18ce6) were calculated at the HF/6-31G* and B3LYP/6-31G* levels of theory for the D3d, Ci(1) and Ci(2) conformations. At the B3LYP level, the Ci(2) optimized geometry was higher in energy by 23.3 and 18.8 kcal mol(-1) than the Ci(1) and D3d optimized geometries, respectively. Harmonic force field, vibrational frequencies and IR absorption intensities were calculated at the corresponding optimized geometry at the B3LYP level for the Ci(2) conformation. Scaled Ci(2) frequencies were compared with the experimental frequencies of free 18ce6, Ci(1) conformation, and 18ce6-urea complex, Ci(2) conformation. This comparison showed possible misassignments in the fundamental vibrational frequencies of 18ce6.     

Ab initio studies on Al(+)(H(2)O)(n), HAlOH(+)(H(2)O)(n-1), and the size-dependent H(2) elimination reaction

We report computational studies on Al(+)(H(2)O)(n), and HAlOH(+)(H(2)O)(n-1), n = 6-14, by the density functional theory based ab initio molecular dynamics method, employing a planewave basis set with pseudopotentials, and also by conventional methods with Gaussian basis sets. The mechanism for the intracluster H(2) elimination reaction is explored. First, a new size-dependent insertion reaction for the transformation of Al(+)(H(2)O)(n), into HAlOH(+)(H(2)O)(n-1) is discovered for n > or = 8. This is because of the presence of a fairly stable six-water-ring structure in Al(+)(H(2)O)(n) with 12 members, including the Al(+). This structure promotes acidic dissociation and, for n > or = 8, leads to the insertion reaction. Gaussian based BPW91 and MP2 calculations with 6-31G* and 6-31G** basis sets confirmed the existence of such structures and located the transition structures for the insertion reaction. The calculated transition barrier is 10.0 kcal/mol for n = 9 and 7.1 kcal/mol for n = 8 at the MP2/6-31G** level, with zero-point energy corrections. Second, the experimentally observed size-dependent H(2) elimination reaction is related to the conformation of HAlOH(+)(H(2)O)(n-1), instead of Al(+)(H(2)O)(n). As n increases from 6 to 14, the structure of the HAlOH(+)(H(2)O)(n-1) cluster changes into a caged structure, with the Al-H bond buried inside, and protons produced in acidic dissociation could then travel through the H(2)O network to the vicinity of the Al-H bond and react with the hydride H to produce H(2). The structural transformation is completed at n = 13, coincident approximately with the onset of the H(2) elimination reaction. From constrained ab initio MD simulations, we estimated the free energy barrier for the H(2) elimination reaction to be 0.7 eV (16 kcal/mol) at n = 13, 1.5 eV (35 kcal/mol) at n = 12, and 4.5 eV (100 kcal/mol) at n = 8. The existence of transition structures for the H(2) elimination has also been verified by ab initio calculations at the MP2/6-31G** level. Finally, the switch-off of the H(2) elimination for n > 24 is explored and attributed to the diffusion of protons through enlarged hydrogen bonded H(2)O networks, which reduces the probability of finding a proton near the Al-H bond.     

Vibrational study of new Pt(II) and Pd(II) complexes with functionalized nitrogen-containing tertiary phosphine oxides. Ab initio study of ortho-, meta- and para-dimethylphosphinylmethyleneoxyaniline

Vibrational study of new Pt(II) and Pd(II) complexes of functionalized nitrogen-containing tertiary phosphine oxides, namely ortho-, meta- and para-dimethylphosphinylmethyleneoxyaniline (o-, m- and p-dpmoa), (CH3)2P(O)CH2OC6H4NH2, have been presented. Geometry optimization of the ligands was performed at HF/6-31G* and B3LYP/6-31G* levels of the theory. Harmonic frequencies were calculated at HF/6-31G* optimized geometries. Relative gas-phase and solution-phase (H2O and CH3CN) basicities of o-, m- and p-dpmoa ligands have been determined by ab initio calculations at STO-3G level with the Onsager reaction field model. On the basis of the vibrational study, physical and analytical data it was suggested that the ligands in the complexes studied coordinate through the amino group and form square-planar platinum and palladium complexes of the general formula ML2Cl2 (M = Pt, Pd, L = o-, m- and p-dpmoa).     

Ab initio theoretical studies on N_(28),B_4N_(24),B_(12)N_(16), and B_(16)N_(12) with T_d symmetry

Structures, energies and vibrational frequencies have been calculated for hollow cage clusters N28, B4N24, B12N16, and B16N12 with Td symmetry using ab initio quantum mechanical methods at the RHF/3-21G level. Each species is predicted to be both chemically and kinetically stable. Skeletal polyhedrons of all considered boron nitride hollow cage clusters are constructed from 5- and 6-membered rings.     

Experimental and computational studies on zwitterionic (E)-2-(1-(2-(4-methylphenylsulfonamido)ethyliminio)ethyl) phenolate

The Schiff base compound (E)-2-(1-(2-(4-methylphenylsulfonamido)ethyliminio)ethyl) phenolate has been synthesised and characterized by IR, UV–Vis, and X-ray single-crystal determination. Ab initio calculations have been carried out for the title compound using the density functional theory (DFT) and Hartree–Fock (HF) methods at 6-31G(d) basis set. The calculated results show that the DFT/B3LYP and HF can well reproduce the structure of the title compound. Using the TD-DFT and TD-HF methods, electronic absorption spectra of the title compound have been predicted and a good agreement with the TD-DFT method and the experimental ones is determined. Molecular orbital coefficient analyses reveal that the electronic transitions are mainly assigned to n → π* and π → π* electronic transitions. To investigate the tautomeric stability, optimization calculations at B3LYP/6-31G(d) level were performed for the NH and OH forms of the title compound. Calculated results reveal that the OH form is more stable than NH form. In addition, molecular electrostatic potential and NBO analysis of the title compound were performed at B3LYP/6-31G(d) level of theory.     

A theoretical study on N-phenyl-N'-(2-thienylmethylene)hydrazine

The molecular geometry and vibrational frequencies of N-phenyl-N'-(2-thienylmethylene)hydrazine (C11H10N2S) have been calculated using Hartree-Fock and density functional method (B3LYP) with 6-31G(d) basis set. The optimized geometric bond lengths and angles obtained using HF and DFT (B3LYP) are in agreement with the experimental data. B3LYP method seems to be appropriate than HF method for the calculation of vibrational frequencies and geometrical parameters of the (C11H10N2S) compound.     

Conformational study of 3β,16β-dihydroxyfriedelane by NMR and ab initio calculations

The complete chemical shift assignments of 3β,16β-dihydroxyfriedelane, a natural compound isolated from the hexane extract of Maytenus acanthophylla leaves was achieved through 1D/2D NMR spectral data. Combining ab initio Hartree-Fock [HF/6-31G(d)] and Density Functional Theory [DFT/B3LYP/6-31G(d,p)] calculations with NMR spectral data, it was possible to establish the predominance of the chair-chair-chair-boat-boat conformation for the five six-membered ring systems in this pentacyclic triterpene.     

Synthesis of the arachno-4-CB(8)H(12)(2)(-) monocarbaborane dianion and NMR/computational studies of the fluxional processes observed in the isoelectronic nine-vertex arachno anions: arachno-4-CB(8)H(12)(2)(-), arachno-4-CB(8)H(13)(-), and arachno-4-SB(8)H(11)(-)

The new monocarbaborane dianion, arachno-4-CB(8)H(12)(2)(-) has been synthesized from the reaction of arachno-4-CB(8)H(14) with 2 equiv of NaH in polar solvents. DFT/GIAO computations at the B3LYP/6-311G//B3LYP/6-311G level, in conjunction with 1D and 2D NMR spectroscopic studies, have confirmed that the dianion results from deprotonation of both the endo-CH and one bridging hydrogen of the parent arachno-4-CB(8)H(14). While the DFT calculations indicate that a C(1) symmetric structure is lowest in energy, the experimental solution NMR data are consistent with the dianion having a C(s)() symmetric structure, thus suggesting that it is fluxional in solution. Transition state calculations located a low-energy pathway with an activation energy of only 2.7 kcal/mol that allows the migration of the bridging hydrogen between the two enantiomeric forms of the dianion. The process can occur by a single-step, simple rotation through a transition state structure containing a -BH(2) group at the B7 boron. Averaging the calculated (11)B NMR chemical shifts of the resonances for those atoms in the static enantiomeric structures that become equivalent by this fluxional process then gives excellent agreement with the solution NMR data. Transition state calculations of the fluxional behavior previously observed for the isoelectronic arachno-4-CB(8)H(13)(-) and arachno-4-SB(8)H(11)(-) monoanions have likewise revealed related low-energy (0.3 and 5.0 kcal/mol, respectively) rearrangement mechanisms involving the simultaneous rotation of three hydrogens (two bridging and one -BH(2)) through a C(s)() symmetry transition state containing three -BH(2) groups.