Vibrational spectra of cyclopentadienylphosphine: infrared and theoretical studies from DFT anharmonic potentials

Both experimental and theoretical infrared investigations of cyclopentadienylphosphine (CpP) are reported. The infrared spectra (3500-500 cm(-1)) in the gas phase have been recorded at 0.5 cm(-1) resolution. Infrared absorptions bands of the two lowest stable conformers were observed and assigned. Average integrated intensities of isolated and overlapping vibrational bands were also determined experimentally. The vibrational frequencies of the CpP system and its P-dideuterated isotopologue have been calculated by means of density functional theory. The Becke exchange functional and Lee-Yang-Parr correlation functional method with a combination of the two basis sets, namely 6-31+G(d,p) and the correlation-consistent triple-zeta cc-pVTZ set of Dunning, were used. Hybrid B3LYP/B3LYP//cc-pVTZ/6-31+G(d,p) anharmonic frequencies of the fundamental, overtone, and combination transitions were calculated in the 3500-200 cm(-1) area with the use of a variational approach, implemented in the P_Anhar_v1.1 code, to assign the experimental data for each conformer.     

Vibrational spectra and fundamental structural assignments from HF and DFT calculations of methyl benzoate

The Fourier transform Raman and Fourier transform infrared spectra of methyl benzoate (MB) were recorded in the liquid phase. The equilibrium geometry, harmonic vibrational frequencies, infrared intensities and Raman scattering activities, depolarization ratios, reduced masses were calculated by Hartree-Fock (HF) and density functional B3LYP method with the 6-311+G(d,p) basis set. The scaled theoretical wavenumbers showed very good agreement with the experimental values. The thermodynamic functions of the title compound were also performed at HF/6-311+G(d,p) and B3LYP/6-311+G(d,p) levels of theory. A detailed interpretations of the infrared and Raman spectra of methyl benzoate is reported. The theoretical spectrograms for FT-IR spectra of the title molecule have been constructed.     

Vibrational study of tolazoline hydrochloride by using FTIR-Raman and DFT calculations

Quantum mechanical (QM) calculations have been carried out in order to study the tolazoline hydrochloride theoretical structure and vibrational properties. This compound was characterized by infrared and Raman spectroscopies in the solid phase. For a complete assignment of the IR and Raman spectra, the density functional theory (DFT) calculations were combined with Pulay's Scaled Quantum Mechanics Force Field (SQMFF) methodology in order to fit the theoretical frequency values to the experimental ones. An agreement between theoretical and available experimental results was found. Three intense bands in the infrared spectrum characteristic of the protonated species of the compound were detected. Also, the possible charge-transfer and the topological properties for both benzyl and imidazoline rings were studied by means of Natural Bond Orbital (NBO) and Atoms in Molecules theory (AIM) investigation.     

Time-domain calculations of the infrared and polarized Raman spectra of tetraalanine in aqueous solution

The IR and polarized (isotropic and anisotropic) Raman spectra are calculated for the amide I band of tetraalanine ((Ala)4) in aqueous solution by using a time-domain computational method, which includes the effects of the diagonal frequency modulations (of individual peptide groups), the off-diagonal (interpeptide) vibrational couplings, and structural dynamics. It is shown that the calculated band profiles, especially the existence of a large negative noncoincidence effect (i.e., large frequency separations between the IR, isotropic Raman, and anisotropic Raman bands, with the isotropic Raman being higher in frequency), are in reasonable agreement with the experimental results. This negative noncoincidence effect derives from two conditions: the positive coupling between the amide I vibrations of peptide groups and the angle larger than 90 degrees between the transition dipoles of the coupled vibrations. This result means that the dynamically changing structures mainly in the polyproline II and beta-type conformations containing some repeated interconversions obtained from the molecular dynamics calculation are consistent with the existence of a large negative noncoincidence effect, as far as the structures satisfy the above two conditions. It is also shown that the electric fields from solvent water molecules induce larger frequency shifts than those of intrachain interactions, with rapid underdamped oscillatory modulations ( approximately 43 fs) due to the librational motions of water molecules that give rise to motional narrowing effect on the spectra. The reason for the difference from the behavior seen for the O-H stretching mode of liquid water is discussed. The time-domain analysis of the mode identity shows that the system proceeds halfway to complete mode mixing with a similar time scale ( approximately 60 fs), suggesting the importance of the nonadiabatic effect, which is included in a natural way in the present computational method.     

Studies of UV photochemistry and transition moment directions of 4,5′,8-trimethyl-psoralen (TMP) by means of polarized infrared ATR spectroscopy

The UV homodimerization of 4,5′,8-trimethyl-psoralen (TMP) both in a solvent and in crystalline thin layers has been investigated.

In the crystalline phase, TMP was found to dimerize completely to the trans—anti stereoisomer. On the basis of polarized IR ATR spectra of thin layers deposited onto a KRS-5 plate, both the monomer and the dimer of TMP were found to have well-defined orientations. The directions of several transition moments have been calculated.

On irradiating TMP in solution, the photochemical reaction results in the cis—syn stereoisomer.     

Vibrational spectra and the structure of long-chain aliphatic compounds

Polymorphism and the structure of mesomorphous states of long-chain aliphatic compounds (LAC) have been studied by vibrational spectroscopy (theory, experiment) using calorimetry, polarizing microscopy (PM), and X-ray diffraction (XRD) analysis as auxiliary methods. LAC are represented by homologous series of alkyl- and alkoxybenzoic acids, alkylcyclohexanecarboxylic acids, their completely or partially fluoroalkyl-substituted analogs, and 4-cyano-4′-(n-alkoxy)biphenyls. The studies were performed at 77–500 K. IR absorption and Raman spectra were measured at 30–4000 cm⁻¹. The compounds are characterized by conformational polymorphism. The molecules and their H-complexes undergo structural rearrangements during phase and conformational transitions. In the course of the rearrangements, alkyl and fluoroalkyl radicals (AR and FAR) are twisted, and carboxyl groups are disordered. The rearrangements dictate the structure of mesophases, which are mostly formed of H-complexes consisting of dimers, monomers, and open associates. N. G. Chernyshevskii Saratov State University. Institute of Physics, Ukrainian Academy of Sciences. Translated fromZhurnal Strukturnoi Khimii, Vol. 36, No. 2, pp. 338–344, March–April, 1995. Translated by L. Smolina     

Vibrational spectra of triiodomesitylene: combination of DFT calculations and experimental studies. Effects of the environment

A study of the internal vibrations of triiodomesitylene (TIM) is presented. It is known from X-rays diffraction at 293 K that the molecule has nearly D(3h) symmetry because of the large delocalization of the methyl protons. By using Raman and infrared spectra recorded at room temperature, a first assignment is done by comparing TIM vibrations with those of 1,3,5-triiodo- and 1,3,5-trimethyl-benzene. This assignment is supported by DFT calculations by using the MPW1PW91 functional with the LanL2DZ(d,p) basis set and assuming C(3h) symmetry. The agreement between the calculated and experimental frequencies is very good: always better than 97% for the observed skeletal vibrations. The calculations overestimate the methyl frequencies by 7%, and experiment shows only broad features for these excitations. Because a neutron diffraction study had established that the TIM conformation at 14 K is not exactly trigonal, new theoretical calculations were done with C(s) symmetry. This shows that all previous E' and E' modes of vibration are split by 2-12 cm(-1). This is confirmed by infrared, Raman, and inelastic neutron scattering spectra recorded below 10 K. Apart from two frequencies, all the TIM skeleton vibrations have been detected and assigned by using C(s) symmetry. For the methyl vibrations, experiment has confirmed the splitting of the previously degenerate modes; only some small discrepancies remain in the assignment. This is partly due to the difference of the model conformation used in the calculations and the crystallographic one. All these results confirm that each of the three methyl groups has not only its own tunnel splitting but also a different specific spectroscopic behavior for all the molecular modes.     

Matrix infrared spectra and density functional calculations of transition metal hydrides and dihydrogen complexes

Metal hydrides are of considerable importance in chemical synthesis as intermediates in catalytic hydrogenation reactions. Transition metal atoms react with dihydrogen to produce metal dihydrides or dihydrogen complexes and these may be trapped in solid matrix samples for infrared spectroscopic study. The MH(2) or M(H(2)) molecules so formed react further to form higher MH(4), (H(2))MH(2), or M(H(2))(2), and MH(6), (H(2))(2)MH(2), or M(H(2))(3) hydrides or complexes depending on the metal. In this critical review these transition metal and dihydrogen reaction products are surveyed for Groups 3 though 12 and the contrasting behaviour in Groups 6 and 10 is discussed. Minimum energy structures and vibrational frequencies predicted by Density Functional Theory agree with the experimental results, strongly supporting the identification of novel binary transition metal hydride species, which the matrix-isolation method is well-suited to investigate. 104 references are cited.     

Ultraviolet and infrared spectra of substituted indoles

An investigation of the electronic absorption spectra of 5-bromo- and N-methyl indoles in the vapour and liquid state in near u.v. region along with their i.r. spectra in the region 400–4000 cm⁻¹ is presented. The vapour absorption spectra of N-methylindole contains two discrete systems in the region 2906.9-2707.5 Å and 2522-2454 Å. Only one system (2976.2-2844.8 Å) has been photographed in case of 5-bromoindole. The observed bands are interpreted in terms of fundamentals, combinations and overtones. The solution phase spectra contain very limited number of bands in each case. The position of these bands together with the nature of solvents used, has been an indicative of the fact that there is sufficient delocalization of the electrons over both the rings.     

Vibrational spectra and normal mode calculations of 1,2,5-telluradiazole

the vibrational spectrum of 1,2,5-telluradiazole is investigated in the 4000-50 cm⁻¹ region by i.r. and Raman spectroscopy. Infrared spectra of solid samples are also measured at 10 k.A satisfactory assignment of all the fundamentals is obtained by employing a valence force field which provided a complete set of normal coordinates suitable to describe the vibrational spectra of selenophene, tellurophene and 1,2,5-selenadiazole.Relations between the vibrational spectrum and the pseudopolymeric crystal structure of 1,2,5-telluradiazole are discussed.     

Vibrational properties and DFT calculations of formamidine-templated Co and Fe formates

Experimental Raman and IR spectra of [NH₂-CH-NH₂][M(HCOO)₃] (M = Co, Fe), containing formamidinium cations [NH₂-CH-NH₂]⁺ (FMD⁺) were recorded at room temperature. In order to assign the vibrational modes corresponding to the FMD⁺ cation, the three-parameter hybrid B3LYP density functional method has been used with the 6-311G(2d,2p) basis to derive the vibrational wavenumbers (harmonic and anharmonic), infrared intensities and Raman scattering activities of formamidine molecule and FMD⁺ cation. The performed calculations revealed that protonation should affect most significantly the ν(CH), ρ(NH₂), ω(NH₂) and τ(NH₂) modes, which are expected to shift towards higher wavenumbers after protonation.     

The FTIR spectra of substituted tetraoxa[8]circulenes and their assignments based on DFT calculations

The FTIR spectrum of symmetrical derivative of the tetraoxa[8]circulene, named para-dinaphthyleno-2,3,10,11-tetraundecyldiphenylenotetrafuran (p-2B2N4R, R = n-C₁₁H₂₃) has been recorded and interpreted using density functional theory (DFT) calculations for the model compounds p-2B2N4R (R = H, C₂H₅). The unsubstituted tetraoxa[8]circulene, namely para-dinaphthylenodiphenylenotetrafuran (p-2B2N) and para-dinaphthyleno-2,3,10,11-tetraethyldiphenylenotetrafuran (p-2B2N4R, R = C₂H₅) belong to the D_2h and D₂ symmetry point groups, respectively. The equilibrium molecular geometry, harmonic vibrational frequencies and infrared intensities have been calculated utilizing the DFT/B3LYP method with the 6–31G(d) basis set using the symmetry constraints. Comparison of the calculated vibrational spectra with the experimental data provides a reliable assignment of the observed bands in the FTIR spectra. The results of quantum-chemical calculations provide a complete interpretation of vibrational modes based on a good agreement with all details of the experimental spectra.     

Determination of transition moment directions by means of dichroic spectra in stretched polymer films. Mechanism of solute orientation

The orientation of planar molecules in stretched polymer films has been studied by means of absorption spectroscopy with linearly polarized light. Solute orientation was considered as a function of the solute structure, polymer structure, polymer orientation and of the temperature. We conclude that orientation of the solute cannot derive primarily from attractive interactions between solute and polymer matrix.     

Raman and infrared spectra, ab initio and DFT calculations, and vibrational assignments for 2,3-cyclopentenopyridine

The structural properties of 2,3-cyclopentenopyridine (pyrindan) have been investigated using several spectroscopic and computational techniques. The Raman and infrared spectra of the molecule have been recorded and a full vibrational assignment was proposed on the basis of experimental and theoretical results. The vapor-phase Raman spectrum was successfully obtained at 260 degrees C without sample decomposition. Density functional theory (DFT) and M?ller-Plesset (MP2) calculations predict that the presence of the nitrogen atom in the six-membered ring has almost no effect on the barrier to inversion (587 cm(-1)) and puckering frequency (139 cm(-1)) as compared to the values previously determined (488 cm(-1) and 143 cm(-1)) for the indan molecule.     

Vibrational spectra of 2,4,6-trinitrotoluene and its isotopically substituted analogues

Infrared spectra of 2,4,6-trinitrotoluene and four of its isotopic analogues (²H and ¹⁵N) have been recorded in the solid state. MNDO-based calculations have been used to predict the fundamental vibrational frequencies of each compound in addition to toluene and nitrobenzene. A good fit between observed and calculated frequencies was obtained.     

Raman and polarized infrared spectra of pyridine-2-thione

Polarized i.r. spectra of oriented polycrystals and the i.r. and Raman spectra of polycrystalline samples of pyridine-2-thione have been obtained. The Raman spectra of a solution of pyridine-2-thione has also been measured and the polarization of many lines determined. The i.r. spectra of S-methyl and N-deuterated compounds have also been investigated. A complete assignment of all the observed peaks has been possible. The results are correlated with the assignments available for related systems.     

Conformational study of monomeric 2,3-butanediols by matrix-isolation infrared spectroscopy and DFT calculations

The FT-IR spectra of two diastereomers of 2,3-butanediol, (R,S) and (S,S), isolated in low-temperature argon and xenon matrixes were studied, allowing the identification of two different conformers for each compound. These conformers were characterized by a +/-gauche arrangement around the O-C-C-O dihedral angle, thus enabling the establishment of a very weak intramolecular hydrogen bond of the O...H-O type. No other forms of these compounds were identified in matrixes, despite the fact that these four conformers had calculated relative energies from 0 to 5.1 kJ mol(-1) and were expected to be thermally populated from 50 to 6% in the gaseous phase of each compound. The nonobservation of additional conformers was explained in terms of low barriers to intramolecular rotation, resulting in the conformational relaxation of the compounds during deposition of the matrixes. The barriers to internal rotation of the OH groups were computed to be less than 4 kJ mol(-1) and are easily overcome in matrixes within the family of conformers with the same heavy atom backbone. The barriers for intramolecular rearrangement of the O-C-C-O dihedral angle in both diastereomers were calculated to range from 20 to 30 kJ mol(-1). Interconversions between the latter conformers were not observed in matrixes, even after annealing up to 65 K. Energy calculations, barriers, and calculated infrared spectra were carried out at the DFT(B3LYP)/6-311++G theory. Additional MP2/6-311++G calculations of energies and vibrational frequencies were performed on the most relevant conformers. Finally, independent estimations of the hydrogen-bond enthalpy in the studied molecules were also obtained based on theoretical structural data and from vibrational frequencies (using well-established empirical correlations). The obtained values for -DeltaH for both diastereomers of 2,3-butanediol amount to ca. 6-8 kJ mol(-1).     

Structural, optoelectronic, infrared and Raman spectra of orthorhombic SrSnO3 from DFT calculations

Orthorhombic SrSnO₃ was investigated using density functional theory (DFT) considering both the local density and generalized gradient approximations, LDA and GGA, respectively. The electronic band structure, density of states, complex dielectric function, optical absorption, and the infrared and Raman spectra were computed. Calculated lattice parameters are close to the experimental measurements, and an indirect band gap (2.27 eV) was obtained within the GGA (LDA) level of calculation. Effective masses for holes and electrons were estimated, being very anisotropic in comparison with similar results for orthorhombic CaSnO₃. The complex dielectric function and the optical absorption of SrSnO₃ were shown to be sensitive to the plane of polarization of the incident light. The infrared spectrum between 100 and 600 cm⁻¹ was obtained, with its main peaks being assigned, and a nice agreement between experimental and theoretical peaks of the Raman spectrum of orthorhombic SrSnO₃ was achieved.