1,4‐Diphenyl‐1,4‐di‐4‐pyridyl‐2,3‐diaza‐1,3‐butadiene: weak C—H·N and C—H·π hydrogen bonds

In the title compound, C₂₄H₁₈N₄, each Schiff base molecule is centrosymmetric and interacts with four neighbours via four C—H(Ph)·N(py) hydrogen bonds (py is pyridyl) and four C—H(py)·π(Ph) hydrogen bonds, leading to an interesting two‐dimensional hydrogen‐bonded layer architecture.     

On‐Surface Assembly of Hydrogen‐ and Halogen‐Bonded Supramolecular Graphyne‐Like Networks

Demonstrated here is a supramolecular approach to fabricate highly ordered monolayered hydrogen‐ and halogen‐bonded graphyne‐like two‐dimensional (2D) materials from triethynyltriazine derivatives on Au(111) and Ag(111). The 2D networks are stabilized by N???H?C(sp) bonds and N???Br?C(sp) bonds to the triazine core. The structural properties and the binding energies of the supramolecular graphynes have been investigated by scanning tunneling microscopy in combination with density‐functional theory calculations. It is revealed that the N???Br?C(sp) bonds lead to significantly stronger bonded networks compared to the hydrogen‐bonded networks. A systematic analysis of the binding energies of triethynyltriazine and triethynylbenzene derivatives further demonstrates that the X₃‐synthon, which is commonly observed for bromobenzene derivatives, is weaker than the X₆‐synthon for our bromotriethynyl derivatives.     

2‐Hydroxyphenyl 2‐methylpyrazolo[1,5‐a]pyrimidin‐6‐yl ketone

The mol­ecules of the title compound, C₁₄H₁₁N₃O₂, form a three‐dimensional soft hydrogen‐bonded network involving C—H?N hydrogen bonds.     

trans‐Diaquabis(nicotinamide‐κN)bis(salicylato‐κO)cobalt(II)

The title compound, [Co(C₇H₅O₃)₂(C₆H₆N₂O)₂(H₂O)₂], forms a three‐dimensional hydrogen‐bonded supramolecular structure. The Co^II ion is in an octahedral coordination environment comprising two pyridyl N atoms, two carboxylate O atoms and two O atoms from water molecules. Intermolecular N—H...O and O—H...O hydrogen bonds produce R₂²(8), R₂²(12) and R₂²(14) rings, which lead to two‐dimensional chains. An extensive three‐dimensional supramolecular network of C—H...O, N—H...O and O—H...O hydrogen bonds and C—H...π interactions is responsible for crystal structure stabilization. This study is an example of the construction of a supramolecular assembly based on hydrogen bonds in mixed‐ligand metal complexes.     

A planar cyclic hexamer of water molecules in dichlorido(2,4,6‐tri‐2‐pyridyl‐1,3,5‐triazine)cadmium(II) trihydrate

In the title compound, [CdCl₂(C₁₈H₁₂N₆)]·3H₂O, the Cd atom has a distorted square‐pyramidal coordination geometry. The solvent water molecules are hydrogen bonded to each other to form planar cyclic water hexamers, which, together with other hydrogen bonds, interlink the Cd complex molecules to give one‐dimensional supramolecular ribbons that extend along the [111] direction. The chains are assembled into two‐dimensional layers parallel to (111) by π–π stacking interactions. Furthermore, interlayer π–π stacking interactions and weak C—H...Cl hydrogen bonds complete the formation of a three‐dimensional framework.     

Contrasting the supramolecular structures in the isomeric pair 5‐bromo‐3‐nitrosalicylaldehyde phenylhydrazone and 3‐bromo‐5‐nitrosalicylaldehyde phenylhydrazone

Isomeric 5‐bromo‐3‐nitrosalicylaldehyde phenylhydrazone and 3‐bromo‐5‐nitrosalicylaldehyde phenylhydrazone, C₁₃H₁₀BrN₃O₃, both crystallize with two molecules in the asymmetric unit. In both isomers, an intramolecular O—H...N hydrogen bond links the hydroxy group and the imine N atom. In the 5‐bromo‐3‐nitro isomer, there are two independent N—H...O hydrogen‐bonded chains, each molecule in the asymmetric unit forming its own chain. These chains are then linked to form a three‐dimensional framework by a combination of weak C—H...O, C—H...Br, C—H...π and π–π stacking interactions. In the 3‐bromo‐5‐nitro isomer, N—H...O hydrogen bonds link the independent molecules alternately into a zigzag chain, which is reinforced by a weak C—H...O interaction. Individual chains are linked by a C—H...Br interaction and a three‐dimensional framework is generated by π–π stacking interactions.     

Hydrogen‐bonding and C—H⋯π interactions in 7‐hydroxy‐3‐methoxy‐4‐methyl‐5,6,7,8‐tetrahydro­pyrido­[1,2‐c]pyrimidin‐1(9H)‐one

In the title compound, C₁₀H₁₄N₂O₃, a pyrimidine ring is fused with a piperidine ring. The pyrimidine ring is planar, whereas the piperidine ring adopts a half‐chair conformation. The molecules of the title compound are connected via O—H⋯O intermolecular hydrogen bonds into infinite zigzag chains. The pyrimidine ring is involved in three C—H⋯π interactions, which link the hydrogen‐bonded chains into a three‐dimensional framework.     

4,6‐Diaminopyrimidine‐2(1H)‐thione hemihydrate: a three‐dimensional hydrogen‐bonded framework

In the title compound, C₄H₆N₄S·0.5H₂O, there are two independent pyrimidinethione units, both of which lie across mirror planes in the space group Cmca. Hence, the H atoms bonded to the ring N atoms in each molecule are disordered over two symmetry‐related sites, each having an occupancy of 0.5. The water molecule lies across a twofold rotation axis parallel to [010]. The molecular components of (I) are linked by seven independent hydrogen bonds, of N—H...N, N—H...S, N—H...O and O—H...S types. A combination of disordered N—H...N hydrogen bonds and ordered N—H...S hydrogen bonds links the pyrimidinethione units into a continuous tubular structure. The water molecule acts as both a double donor of hydrogen bonds and a double acceptor, forming hydrogen bonds with components of four distinct pyrimidinethione tubes, thus linking these tubes into a three‐dimensional structure.     

A new polymorph of 1,4‐bis(imidazol‐1‐ylmethyl)benzene dihydrate and its hydrogen‐bonded fivefold interpenetrated CdSO4 network

Single crystals of a new polymorph of 1,4‐bis(imidazol‐1‐ylmethyl)benzene dihydrate (bix·2H₂O), C₁₄H₁₄N₄·2H₂O, have been obtained by the hydrothermal method. The asymmetric unit is composed of two independent half‐bix molecules, one on an inversion center and one on a twofold axial site, and two water molecules. The disordered water molecules link into discrete tetrameric water units via two O—H...O hydrogen bonds, forming planar R₄⁴(8) rings. These tetrameric water units and bix molecules are further linked by two O—H...N hydrogen bonds into a three‐dimensional network in which an (106) hydrogen‐bonded ring is observed. These large rings lead to the formation of a fivefold interpenetrated network. If both the tetrameric water units and the bix molecules can be regarded as connected nodes, one single three‐dimensional net can then be rationalized as a CdSO₄ network. This study indicates that topological methodology can be applied in some cases in order to understand the inherent characteristics of some hydrogen‐bonded supramolecular assemblies.     

Three‐dimensional hydrogen‐bonding supramolecular architecture of 2‐(3‐pyridinio)‐5‐(3‐pyridyl)‐1,3,4‐oxa­diazole perchlorate

In the crystal structure of the title compound, C₁₂H₉N₄O⁺·ClO₄⁻, the protonated cation adopts a cis‐I conformation and approximately planar geometry. Each perchlorate anion acts as the acceptor of three C—H⋯O weak interactions, which, together with N—H⋯N and C—H⋯N hydrogen bonds between the protonated cations, extend this structure into a three‐dimensional hydrogen‐bonded network.     

catena‐Poly[[nickel(II)‐μ2‐[1,3‐bis(imidazol‐1‐ylmethyl)benzene‐κ2N3:N3′]‐μ2‐(5‐carboxybenzene‐1,3‐dicarboxylato‐κ4O1,O1′:O3,O3′)] 0.41‐hydrate]

The title compound, {[Ni(C₉H₄O₆)(C₁₄H₁₄N₄)]·0.41H₂O}_n, exhibits a three‐dimensional hydrogen‐bonded supramolecular framework. The Ni^II cation is six‐coordinated in a distorted triangular prism defined by two N atoms from two 1,3‐bis(imidazol‐l‐ylmethyl)benzene (bix) ligands and four O atoms from two 5‐carboxybenzene‐1,3‐dicarboxylate (HBTC) dianions. The bix molecules and HBTC dianions both act as bidentate ligands, linking the Ni^II cations to form a one‐dimensional coordination polymer. A two‐dimensional wave‐like net is constructed by O—H...O hydrogen bonds linking adjacent chains. Partially occupied solvent water molecules fill the cavities and link these layers to form a three‐dimensional supramolecular structure via O—H...O hydrogen bonds. The title compound was also characterized by powder X‐ray diffraction and thermogravimetric analysis.     

Hydrogen‐bonded networks in 1‐(4‐methoxyphenyl)‐2,2‐dimethylpropan‐1‐ol

The asymmetric unit of the title compound, C₁₂H₁₈O₂, contains two independent molecules. They differ only slightly in conformation but form completely different intermolecular hydrogen‐bonded arrays. One molecule exhibits disorder in the hydroxy group region, but this does not influence the formation of hydrogen bonds. The bulky tert‐butyl group on one side of the carbinol C atom and the benzene ring on the other side promote the formation of discrete dimeric motifs via hydrogen‐bridged hydroxy groups. Dimers are further joined by strong hydroxy–methoxy O—H...O bonds to form chains with dangling alcohol groups. Weaker intermolecular C—H...O interactions mediate the formation of a two‐dimensional network.     

trans‐Diaquabis(3‐hydroxybenzoato‐κO1)bis(nicotinamide‐κN1)copper(II)

The title compound, [Cu(C₇H₅O₃)₂(C₆H₆N₂O)₂(H₂O)₂], is a two‐dimensional hydrogen‐bonded supramolecular complex. The Cu^II ion resides on a centre of symmetry and is in an octahedral coordination environment comprising two pyridine N atoms, two carboxylate O atoms and two O atoms from water molecules. Intermolecular N—H...O and O—H...O hydrogen bonds produce R₂²(4), R₂²(8) and R₂²(15) rings which lead to one‐dimensional polymeric chains. An extensive two‐dimensional network of N—H...O and O—H...O hydrogen bonds and C—H...π interactions are responsible for crystal stabilization.     

Diaquabis(4‐fluorobenzoato‐κO)bis(nicotinamide‐κN)cobalt(II)

The title compound, [Co(C₇H₄FO₂)₂(C₆H₆N₂O)₂(H₂O)₂], is a three‐dimensional hydrogen‐bonded supramolecular complex. The Co^II ion resides on a centre of symmetry and is in an octahedral coordination environment comprising two pyridyl N atoms, two carboxylate O atoms and two O atoms from water molecules. Intermolecular N—H...O and O—H...O hydrogen bonds produce R₃²(6), R₂²(12) and R₂²(16) rings, which lead to two‐dimensional chains. An extensive three‐dimensional network of C—H...F, N—H...O and O—H...O hydrogen bonds and π–π interactions are responsible for crystal stabilization.     

One‐dimensional C—H...N hydrogen‐bonded polymers in flexible tetrapyridyl systems

In N,N,N′,N′‐tetrakis(2‐pyridylmethyl)propane‐1,3‐diamine, C₂₇H₃₀N₆, (I), and N,N,N′,N′‐tetrakis(2‐pyridylmethyl)butane‐1,4‐diamine, C₂₈H₃₂N₆, (II), the twofold rotational symmetry of (I) favours the formation of a one‐dimensional hydrogen‐bonded polymer with two columns of C—H...N hydrogen bonds, while the inversion symmetry of (II) allows the formation of a one‐dimensional hydrogen‐bonded polymer stabilized by four columns of C—H...N hydrogen bonds. The possible role played by the chain length of the linking alkanediamine in determining the type of supramolecular architecture in this series of compounds is discussed.     

(S,S)‐4′′‐Cyano‐7,7′′‐dimethoxy‐3′,6′‐dioxodispiro[indane‐2,2′‐piperazine‐5′,2′′‐indane]‐4‐carboxamide methanol solvate: interrupting the amide‐to‐amide hydrogen‐bonded tape

The title methanol solvate, C₂₄H₂₂N₄O₅·CH₃OH, forms an extended three‐dimensional hydrogen‐bonded structure, assisted by the presence of several good donor and acceptor sites. It shows none of the crystal packing features typically expected of piperazinediones, such as amide‐to‐amide R₂²(8) hydrogen bonding. In this structure the methanol solvent appears to play only a space‐filling role; it is not involved in any hydrogen bonding and instead is disordered over several sites. This study reports, to the best of our knowledge, the first crystal structure of an indane‐containing piperazinedione compound which exhibits a three‐dimensional hydrogen‐bonded structure formed by classical (N—H...O and N—H...N) hydrogen‐bonding interactions.     

Hydro­gen‐bonding and C—H⋯π interactions in 1,7‐bis(4‐hydroxy‐3‐methoxy­phenyl)­heptane‐3,5‐dione (tetra­hydro­curcumin)

The title compound, C₂₁H₂₄O₆, is the reduced form of curcumin, and exhibits important cosmoceutical properties. The mol­ecule is non‐planar and the benzene rings positioned at the ends of the heptane chain are orthogonally placed, with a dihedral angle of 84.09 (7)° between them. The molecular geometry and H‐atom locations reveal that the `heptane‐3,5‐dione' moiety exists in the keto–enol form, with the hydroxy H atom disordered over two adjacent sites. The packing of the mol­ecules in the lattice is directed by strong O—H⋯O intermolecular hydrogen bonds, which generate two‐dimensional sheets. These sheets are linked by C—H⋯O hydrogen bonds and weak C—H⋯π interactions to develop a three‐dimensional network.     

N6‐Furfuryladenine (kinetin) hydrochloride

In the title compound, N⁶‐furfuryl­adenin‐3‐ium chloride, C₁₀H₁₀N₅O⁺·Cl⁻, the adenine moiety exists as the N3‐protonated N7–H tautomer. The orientation of the N6 substituent (furfuryl moiety) is distal to the imidazole ring of the adenine base. The dihedral angle between the adenine plane and the furfuryl ring plane is 76.1 (2)°. Three N—H⋯Cl hydrogen bonds are responsible for the formation of a supramolecular chain‐like pattern. These supramolecular chains are interconnected by C—H⋯Cl hydrogen bonds to form a hydrogen‐bonded sheet and a three‐dimensional hydrogen‐bonded network.     

1‐(4‐Bromo­phenyl)‐3‐(4‐methyl­phenyl)­prop‐2‐en‐1‐one

In the mol­ecule of the title compound, C₁₆H₁₃BrO, the two benzene rings are rotated in opposite directions with respect to the central C—C=C—C part of the mol­ecule. The phenone O atom deviates from the least‐squares plane of the mol­ecule by 0.300 (3) Å. In the crystal structure, mol­ecules are paired through C—H⋯π interactions. The molecular pairs along [001] are hydrogen bonded through three translation‐related co‐operative hydrogen bonds in the `bay area', forming molecular chains, which are further hydrogen bonded through C—H⋯Br weak interactions, forming (010) molecular layers. In the third direction, there are only weak van der Waals interactions. The co‐operative hydrogen bonds in the `bay area' are discussed briefly.