Heterotapes: A Persistent,Dual‐Synthon Hydrogen‐Bonding Motif

The small dinitrile anion carbamoyldicyanomethanide, [C(CN)₂‐(CONH₂)]^? (cdm), reproducibly forms a hydrogen‐bonded tape containing two different supramolecular synthons: a “heterotape”. The tape incorporates both an amide dimer and a nitrile‐containing ring. The robustness of the motif is confirmed by its persistence from an isolated tape in a separated ion‐pair structure, [K(15c5)₂](cdm)? H₂O, to its incorporation into coordination complexes of octahedral metals, thus facilitating the formation of 2D sheets. Complexes containing coligands that occupy the equatorial coordination sites, [Cu(2,2′‐py₂NH)₂(cdm)₂]? 2MeOH, [Ni(cyclam)(cdm)₂], and [Cu(cyclam)(cdm)₂]?2MeOH (cyclam=1,4,8,11‐tetraazacyclotetradecane, 2,2′‐py₂NH=di(2‐pyridyl)amine), show retention of the heterotape motif, whilst the ethylene diamine complex [Cu‐(en)₂(cdm)₂] (en=ethylene diamine) displays an alternative hydrogen‐bonding motif due to interference from the diamine ligands.     

Highly Sensitive Magnetic Effects Induced by Hydrogen‐Bonding Interactions in a High‐Spin Metallosupramolecular Fe4II [2×2] Grid‐Type Complex

A sensitive magnetic nanoprobe : Hydrogen‐bonding interactions are reflected with great sensitivity in the ¹H NMR spectra of a high‐spin multinuclear Fe₄^II [2×2] grid‐type complex (see scheme) and the measured shifts can be used to evaluate the hydrogen‐bond donating ability. The grid complex also represents a prototype of a very sensitive magnetic nanoreceptor for the detection of very small changes around a magnetic center.

     

Self‐Assembly of Ureido‐Pyrimidinone Dimers into One‐Dimensional Stacks by Lateral Hydrogen Bonding

Ureido‐pyrimidinone (UPy) dimers substituted with an additional urea functionality self‐assemble into one‐dimensional stacks in various solvents through lateral non‐covalent interactions. ¹H NMR and DOSY studies in CDCl₃ suggest the formation of short stacks (<10), whereas temperature‐dependent circular dichroism (CD) studies on chiral UPy dimers in heptane show the formation of much larger helical stacks. Analysis of the concentration‐dependent evolution of chemical shift in CDCl₃ and the temperature‐dependent CD effect in heptane suggest that this self‐assembly process follows an isodesmic pathway in both solvents. The length of the aggregates is influenced by substituents attached to the urea functionality. In sharp contrast, UPy dimers carrying an additional urethane group do not self‐assemble into ordered stacks, as is evident from the absence of a CD effect in heptane and the concentration‐independent chemical shift of the alkylidene proton of the pyrimidinone ring in CDCl₃.     

Micro‐ and Nanometer‐Scale Porous,Fibrous, and Sheet Architectures Constructed by Supramolecular Assemblies of Dipyrrolyldiketones

X‐ray analysis of some 1,3‐dipyrrolyl‐1,3‐propanediones synthesized from pyrroles and malonyl chloride derivatives revealed 1D supramolecular networks formed by N? H???O?C interactions in the solid state. Micro‐ and nanometer‐scale morphologies of porous, fibrous, and sheet structures were fabricated by hydrogen‐bonding interactions and determined by fine‐tuning the substituents and the solvents used. Of the unique polymorphs, ordered 2D lamellar sheet structures of the derivatives with long alkyl chains (C₁₆H₃₃, C₁₄H₂₉, and so on) were constructed by van der Waals hydrophobic effects between aliphatic chains as well as hydrogen bonding.     

A Self‐Sorting Scheme Based on Tetra‐Urea Calix[4]arenes

Size and shape do matter : When dimerized in nonpolar solvents, an equimolar mixture of eleven tetra‐urea calix[4]arenes with different wide‐rim substituents self‐sorts into only six out of 35 different homo‐ and heterodimers (see picture). Since the calixarene scaffold and the four urea units are the same in all cases, the self‐sorting process is driven only by the cooperative action of steric requirements and stoichiometry.

     

Unique Hydrogen‐Bonded Complex of Hydronium and Hydroxide Ions

H₃O⁺ and OH^?, formed by the self‐ionization of two coordinating water molecules during the crystal growing of a host molecule [1,3,5‐tris(hydroxymethyl)2,4,6‐triethylbenzene ( 1 )], could be effectively stabilized by hydrogen‐bonding interactions with the preorganized hydroxy groups of three molecules of 1. The binding motifs observed in the complex ( 1 )₃?H₃O⁺?HO^? show remarkable similarity to those postulated for the hydrated hydronium and hydroxide ion complexes, which play important roles in various chemical, biological, and atmospheric processes, but their molecular structures are still not fully understood and remain a subject of intensive research.     

Redox‐Controlled Hydrogen Bonding: Turning a Superbase into a Strong Hydrogen‐Bond Donor

Herein the synthesis, structures and properties of hydrogen‐bonded aggregates involving redox‐active guanidine superbases are reported. Reversible hydrogen bonding is switched on by oxidation of the hydrogen‐donor unit, and leads to formation of aggregates in which the hydrogen‐bond donor unit is sandwiched by two hydrogen‐bond acceptor units. Further oxidation (of the acceptor units) leads again to deaggregation. Aggregate formation is associated with a distinct color change, and the electronic situation could be described as a frozen stage on the way to hydrogen transfer. A further increase in the basicity of the hydrogen‐bond acceptor leads to deprotonation reactions.     

An Enantiopure Hydrogen‐Bonded Octameric Tube: Self‐Sorting and Guest‐Induced Rearrangement

The assembly of a discrete hydrogen‐bonded molecular tube from eight small identical monomers is reported. Tube assembly was accomplished by means of selective heterodimerization between isocytosine and ureidopyrimidinone hydrogen‐bonding motifs embedded in an enantiopure bicyclic building block, leading to the selective formation of an octameric supramolecular tube. Upon introduction of a fullerene guest molecule, the octameric tube rearranges into a tetrameric inclusion complex and the hydrogen‐bonding mode is switched. The dynamic behavior of the system is further explored in solvent‐ and guest‐responsive self‐sorting experiments.     

Coils,Rods and Rings in Hydrogen‐Bonded Supramolecular Polymers

The article discusses the development and properties of supramolecular polymers based on quadruple hydrogen bonds between self‐complementary ureidotriazine (UTr) and ureidopyrimidinone (UPy) functional groups. The high association constant with which these groups dimerize leads to polymers with a high degree of polymerization in isotropic solution. Application of these units for the functionalization of telechelic polymers results in new materials with mechanical properties approaching those of covalent polymers, but with a much stronger temperature‐dependent behavior. Solvophobic interactions between the hydrogen bonding moieties may be used to obtain supramolecular polymers with a well defined helical columnar architecture. Another consequence of the high dimerization constant of the UPy group is the phenomenon of a critical concentration in solutions of many bifunctional monomers. Below this concentration, only cycles are present, while above the critical concentration, the amount of cycles remains constant, and a polymer is formed. Conformational properties of the linker units are used to control the equilibrium between polymers and cycles, and are proposed to form a promising strategy toward tunable materials.

Supramolecular polymer material with elastomeric properties resulting from functionalization with UPy groups. (Reproduced with permission. © John Wiley & Sons, Inc.)     

A Halogen‐Bonded Dimeric Resorcinarene Capsule

Iodine (I₂) acts as a bifunctional halogen‐bond donor connecting two macrocyclic molecules of the bowl‐shaped halogen‐bond acceptor, N‐cyclohexyl ammonium resorcinarene chloride 1 , to form the dimeric capsule [(1,4‐dioxane)₃@ 1 ₂(I₂)₂]. The dimeric capsule is constructed solely through halogen bonds and has a single cavity (V=511 ų) large enough to encapsulate three 1,4‐dioxane guest molecules.     

Characterization of Supramolecular Hidden Chirality of Hydrogen‐Bonded Networks by Advanced Graph Set Analysis

Supramolecular hidden chirality of hydrogen‐bonded (HB) networks of primary ammonium carboxylates was exposed by advanced graph set analysis from a symmetric viewpoint in topology. The ring‐type HB (R‐HB) networks are topologically regarded as faces, and therefore exhibit prochirality and positional isomerism due to substituents attached on the faces. To describe the symmetric properties of the faces, additional symbols, Re (right‐handed or clockwise), Si (left‐handed or anticlockwise), and m (mirror), were proposed. According to the symbols, various kinds of faces were classified based on the symmetry. This symmetry consideration of the faces enables us to precisely evaluate supramolecular chirality, especially its handedness, of 0D‐cubic, 1D‐ladder and 2D‐sheet HB networks that are composed of the faces. The 1D‐ladder and 2D‐sheet HB networks generate chirality by accumulating the chiral faces in 1D and 2D manners, respectively, whereas 0D‐cubic HB networks generate chirality based on combinations of eight kinds of faces, similar to the chirality of dice.     

An AAA–DDD Triply Hydrogen‐Bonded Complex Easily Accessible for Supramolecular Polymers

For a complementary hydrogen‐bonded complex, when every hydrogen‐bond acceptor is on one side and every hydrogen‐bond donor is on the other, all secondary interactions are attractive and the complex is highly stable. AAA–DDD (A=acceptor, D=donor) is considered to be the most stable among triply hydrogen‐bonded sequences. The easily synthesized and further derivatized AAA–DDD system is very desirable for hydrogen‐bonded functional materials. In this case, AAA and DDD, starting from 4‐methoxybenzaldehyde, were synthesized with the Hantzsch pyridine synthesis and Friedländer annulation reaction. The association constant determined by fluorescence titration in chloroform at room temperature is 2.09×10⁷ M ^?1. The AAA and DDD components are not coplanar, but form a V shape in the solid state. Supramolecular polymers based on AAA–DDD triply hydrogen bonded have also been developed. This work may make AAA–DDD triply hydrogen‐bonded sequences easily accessible for stimuli‐responsive materials.     

Evaluating the COSMO‐RS Method for Modeling Hydrogen Bonding in Solution

The ability of the Conductor‐like Screening Model for Realistic Solvation (COSMO‐RS) computational method to model hydrogen bond (HB) formation in solution is examined by comparing computational data with experimental data from literature. This is the first study of this kind where mixed solvents are also involved. Hydrogen bond formation is examined between neutral molecules, between acids and their anions, and between various anion receptor molecules and different anions in a number of aprotic solvents. HB formation equilibrium constants, the corresponding Gibbs’ free energies and, when available from the literature, enthalpies were calculated. The supermolecule (SM) approach and the contact probability (CP) approach were used. Both in the case of the SM and CP approach, good to very good correlations between the experiment and computations are found for complexes formed from neutral species, enabling quantitative predictions. When the HB acceptor is an anion, the correlations are poor and in some cases even qualitative predictions fail.     

Computer‐Aided Design of a Sulfate‐Encapsulating Receptor

Custom built : A promising new approach towards more efficient self‐assembled cage receptors through computer‐aided design is demonstrated. The resulting M₄L₆ tetrahedral cage, internally functionalized with accurately positioned urea hydrogen‐bonding groups (see structure; yellow: predicted, blue: experimental, space‐filling: SO₄^2?), proved to be a remarkably strong sulfate receptor in water.

     

The Versatile,Efficient, and Stereoselective Self‐Assembly of Transition‐Metal Helicates by Using Hydrogen‐Bonds

A diverse range of dinuclear double‐stranded helicates in which the ligand strand is built up by using hydrogen‐bonding has been synthesized. The helicates, formulated as [Co₂(L)₂(L‐H)₂X₂], readily self‐assemble from a mixture of a suitable pyridine–alcohol compound (L; for example, 6‐methylpyridine‐2‐methanol, 1 ), and a CoX₂ salt in the presence of base. Nine such helicates have been characterized by X‐ray crystallography. For helicates derived from the same pyridine–alcohol precursor, a remarkable regularity was found for both the molecular structure and the crystal packing arrangements, regardless of the nature of the ancillary ligand (X). A notable exception was observed in the solid‐state structure of [Co₂( 1 )₂( 1 ‐H)₂(NCS)₂] for which intermolecular nonbonded contacts between the sulfur atoms (S???S=3.21 Å) lead to the formation of 1D chains. Helicates derived from (R)‐6‐methylpyridine‐2‐methanol ( 2 ) are soluble in solvents such as CH₃CN and CH₂Cl₂, and their self‐assembly could be monitored in solution by ¹H NMR, UV/Vis, and CD titrations. No intermediate complexes were observed to form in a significant concentration at any point throughout these titrations. The global thermodynamic stability constant of [Co₂( 2 )₂( 2 ‐H)₂(NO₃)₂] was calculated from spectrophotometric data to be logβ=8.9(8). The stereoisomerism of these helicates was studied in some detail and the self‐assembly process was found to be highly stereoselective. The chirality of the ligand precursors can control the absolute configuration of the metal centers and thus the overall helicity of the dinuclear assemblies. Furthermore, the enantiomers of rac‐6‐methylpyridine‐2‐methanol ( 3 ) undergo a self‐recognition process to form exclusively homochiral helicates in which the four pyridine–alcohol units possess the same chirality.     

Conformational Flexibility of Tetralactam Macrocycles and Their Intermolecular Hydrogen‐Bonding Patterns in the Solid State

Flexible rigidity : Tetralactam macrocycles of the Hunter type bear a rigid scaffold (see space‐filling representation), but can still widely adapt to the properties of a guest molecule inside their cavities. X‐ray crystal structures of a series of differently substituted macrocycles reveal a remarkably broad variety of intermolecular hydrogen‐bonding patterns organizing the macrocycles in the crystals in intriguingly different ways.