Does the HO2 radical react with H2S,CH3SH,and CH3SCH3?

The kinetics of the title reactions were investigated in a discharge flow tube by using laser magnetic resonance detection of HO₂. The upper limits for the bimolecular rate constants for the reactions of HO₂ with H₂S (k₁), CH₃SH (k₂), and CH₃SCH₃ (k₃) are <3 × 10^?15, <4 × 10^?15, and <5 × 10^?15 cm³ molecule^?1 s^?1, respectively, at 298 K. Our upper limit for k₁ is three orders of magnitude lower than the previously reported value. Measurements at higher temperatures also yield similar upper limits. Our results suggest that HO₂ is not an important oxidant for these reduced compounds in the atmosphere. © 1994 John Wiley & Sons, Inc.     

Freezing Point of Mixtures of H2 16O with H2 17O and Those of Aqueous CD3CH2OH and CH3 13CH2OH Solutions

The freezing point of mixtures of H₂ ¹⁶O with H₂ ¹⁷O was measured as a function of the molal concentration. The freezing points rose linearly with increasing molal concentration above that of pure ordinary water, H₂ ¹⁶O, at 273.15 K. This confirms Kiyosawa's previous conclusion [K. Kiyosawa, J. Solution Chem. 20, 583 (1991).], drawn from findings on changes in the freezing point of mixtures of H₂ ¹⁶O with H₂ ¹⁸O or D₂ ¹⁶O that even a difference in the number of neutrons in the hydrogen or oxygen atoms of water molecules makes them behave as different entities with respect to the colligative properties of solutions. This has been confirmed to also occur in mixtures of H₂ ¹⁶O with H₂ ¹⁷O.     

High-temperature rate constants for CH3OH + Kr --> products, OH + CH3OH --> products, OH + (CH3)(2)CO --> CH2COCH3 + H2O, and OH + CH3 --> CH) + H2O

The reflected shock tube technique with multipass absorption spectrometric detection of OH radicals at 308 nm (corresponding to a total path length of approximately 4.9 m) has been used to study the dissociation of methanol between 1591 and 2865 K. Rate constants for two product channels [CH3OH + Kr --> CH3 + OH + Kr (1) and CH3OH + Kr --> 1CH2 + H2O + Kr (2)] were determined. During the course of the study, it was necessary to determine several other rate constants that contributed to the profile fits. These include OH + CH3OH --> products, OH + (CH3)2CO --> CH2COCH3 + H2O, and OH + CH3 --> 1,3CH2 + H2O. The derived expressions, in units of cm(3) molecule(-1) s(-1), are k(1) = 9.33 x 10(-9) exp(-30857 K/T) for 1591-2287 K, k(2) = 3.27 x 10(-10) exp(-25946 K/T) for 1734-2287 K, kOH+CH3OH = 2.96 x 10-16T1.4434 exp(-57 K/T) for 210-1710 K, k(OH+(CH3)(2)CO) = (7.3 +/- 0.7) x 10(-12) for 1178-1299 K and k(OH+CH3) = (1.3 +/- 0.2) x 10(-11) for 1000-1200 K. With these values along with other well-established rate constants, a mechanism was used to obtain profile fits that agreed with experiment to within <+/-10%. The values obtained for reactions 1 and 2 are compared with earlier determinations and also with new theoretical calculations that are presented in the preceding article in this issue. These new calculations are in good agreement with the present data for both (1) and (2) and also for OH + CH3 --> products.     

Interaction energy and the shift in OH stretch frequency on hydrogen bonding for the H2O → H2O,CH3OH → H2O,and H2O → CH3OH dimers

The ability to use calculated OH frequencies to assign experimentally observed peaks in hydrogen bonded systems hinges on the accuracy of the calculation. Here we test the ability of several commonly employed model chemistries—HF, MP2, and several density functionals paired with the 6‐31+G(d) and 6‐311++G(d,p) basis sets—to calculate the interaction energy (D_e) and shift in OH stretch fundamental frequency on dimerization (δ(ν)) for the H₂O → H₂O, CH₃OH → H₂O, and H₂O → CH₃OH dimers (where for X → Y, X is the hydrogen bond donor and Y the acceptor). We quantify the error in D_e and δ(ν) by comparison to experiment and high level calculation and, using a simple model, evaluate how error in D_e propagates to δ(ν). We find that B3LYP and MPWB1K perform best of the density functional methods studied, that their accuracy in calculating δ(ν) is ≈ 30–50 cm^?1 and that correcting for error in D_e does little to heighten agreement between the calculated and experimental δ(ν). Accuracy of calculated δ(ν) is also shown to vary as a function of hydrogen bond donor: while the PBE and TPSS functionals perform best in the calculation of δ(ν) for the CH₃OH → H₂O dimer their performance is relatively poor in describing H₂O → H₂O and H₂O → CH₃OH. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2010     

DFT and ab initio study on the reaction mechanism of CH2SH + O2

The mechanism for the CH₂SH + O₂ reaction was investigated by DFT and ab initio chemistry methods. The geometries of all possible stationary points were optimized at the B3LYP/6-311+G(d,p) level, and the single point energy was calculated at the CCSD(T)/cc-pVXZ(X = D and T), G3MP2 and BMC-CCSD levels. The results indicate that the oxidation of CH₂SH by O₂ to form HSCH₂OO is a barrierless process. The most favorable channel is the rearrangement of the initial adduct HSCH₂OO (IM1) to form another intermediate H₂C(S)OOH (IM3) via a five-center transition state, and then the C–O bond fission in IM3 leads to a complex CH₂S. . .HO₂ (MC1), which finally gives out to the major product CH₂S + HO₂. Due to high barriers, other products including cis- and trans-HC(O)SH + HO could be negligible. The direct abstraction channel was also determined to yield CH₂S + HO₂, with the barrier height of 22.3, 18.1 and 15.0 kcal/mol at G3MP2, CCSD(T)/cc-pVTZ and BMC-CCSD levels, respectively, it is not competitive with the addition channel, in which all stationary points are lower than reactant energetically. The other channels to produce cis- and trans-CHSH + HO₂ are also of no importance.     

Kinetic study of the reactions of Cl atoms with CF3CH2CH2OH, CF3CF2CH2OH, CHF2CF2CH2OH, and CF3CHFCF2CH2OH

The reaction kinetics of chlorine atoms with a series of partially fluorinated straight-chain alcohols, CF(3)CH(2)CH(2)OH (1), CF(3)CF(2)CH(2)OH (2), CHF(2)CF(2)CH(2)OH (3), and CF(3)CHFCF(2)CH(2)OH (4), were studied in the gas phase over the temperature range of 273-363 K by using very low-pressure reactor mass spectrometry. The absolute rate coefficients were given by the expressions (in cm(3) molecule(-1) s(-1)): k(1) = (4.42 +/- 0.48) x 10(-11) exp(-255 +/- 20/T); k(1)(303) = (1.90 +/- 0.17) x 10(-11), k(2) = (2.23 +/- 0.31) x 10(-11) exp(-1065 +/- 106/ T); k(2)(303) = (6.78 +/- 0.63) x 10(-13), k(3) = (8.51 +/- 0.62) x 10(-12) exp(-681 +/- 72/T); k(3)(303) = (9.00 +/- 0.82) x 10(-13) and k(4) = (6.18 +/- 0.84) x 10(-12) exp(-736 +/- 42/T); k(4)(303) = (5.36 +/- 0.51) x 10(-13). The quoted 2sigma uncertainties include the systematic errors. All title reactions proceed via a hydrogen atom metathesis mechanism leading to HCl. Moreover, the oxidation of the primarily produced radicals was investigated, and the end products were the corresponding aldehydes (R(F)-CHO; R(F) = -CH(2)CF(3), -CF(2)CF(3), -CF(2)CHF(2), and -CF(2)CHFCF(3)), providing a strong experimental indication that the primary reactions proceed mainly via the abstraction of a methylenic hydrogen adjacent to a hydroxyl group. Finally, the bond strengths and ionization potentials for the title compounds were determined by density functional theory calculations, which also suggest that the alpha-methylenic hydrogen is mainly under abstraction by Cl atoms. The correlation of room-temperature rate coefficients with ionization potentials for a set of 27 molecules, comprising fluorinated C2-C5 ethers and C2-C4 alcohols, is good with an average deviation of a factor of 2, and is given by the expression log(k) (in cm(3) molecule(-1) s(-1)) = (5.8 +/- 1.4) - (1.56 +/- 0.13) x (ionization potential (in eV)).     

Kinetics of the reactions of atomic chlorine with H2S,D2S,CH3SH,and CD3SD

Time-resolved resonance fluorescence detection of atomic chlorine following 266-nm laser flash photolysis of Cl₂CO/RSR'/N₂ mixtures has been employed to study the kinetics of Cl reactions with H₂S(k₁), CH₃SH(k₂), D₂S(k₃), and CD₃SD(k₄) as a function of temperature (193–431 K) and pressure (25–600 torr). Arrhenius expressions which describe our results are (units are 10^?11 cm³molecule^?1s^?1; uncertainties are 2σ, precision only) k₁ = (3.69 ± 0.33) exp[(208 ± 24)/T], k₂ = (11.9 ± 1.7) exp[(151 ± 38)/T], and k₃ = (1.93 ± 0.32) exp[(168 ± 42)/T]. The Cl + CD₃SD reaction has been studied at 299 K and 396 K; values for k₄ at these two temperatures are essentially the same as those measured for k₂. Our results are compared with earlier studies and the mechanistic implications of observed negative activation energies and H? D kinetic isotope effects are discussed. © 1995 John Wiley & Sons, Inc.     

Theoretical study on the atmospheric reaction of CH3SH with O2

A detailed study on the reaction mechanism of CH₃SH with O₂ was carried out using quantum chemical methods. Eleven singlet pathways and four triplet pathways were found based on CCSD(T)//M06-2x calculations. The nature of chemical bonding evolution was also studied using electron localization function and atoms in molecules analysis. Moreover, reaction rate constants were calculated between 200 and 800 K at the level of the transition state theory by Wigner tunneling correction. The results suggest that the main products should be CH₂SO, H₂O, CH₃OH, SO, CH₄, and SO₂, respectively, basically coinciding with the experimental results. The corresponding feasible pathways are channels R7, R8, and R9, respectively, with an effective energy barrier of 56.21 kJ/mol. Obviously, given the low energy barrier similar to the main paths mentioned above, the products CH₂SH and HO₂ should assume a definite proportion in all possible products, although such species were not yet detected in experiment.     

Sequential addition of H2O, CH3OH, and NH3 to Al3O3-: a theoretical study

Photoelectron spectra of two species, Al3O3(H2O)2- and Al3O3(CH3OH)2-, that are produced by the addition of two water or methanol molecules to Al3O3- are interpreted with density-functional geometry optimizations and electron propagator calculations of vertical electron detachment energies. In both cases, there is only one isomer that is responsible for the observed spectral features. A high barrier to the addition of a second molecule may impede the formation of Al3O3N2H6- clusters in an analogous experiment with NH3.     

Theoretical study of interactions between 1-alkyl-3-methyimidazolium tetrafluoroborate and dibenzothiophene: DFT,NBO, and AIM analysis

Density functional theory is employed to study the interaction energies between dibenzothiophene (DBT) and 1-alkyl-3-methylimidazolium tetrafluoroborate ([C _n mim]⁺[BF₄]^?). The structures of DBT, 1-ethyl-3-methylimidazolium tetrafluoroborate ([C₂mim]⁺[BF₄]^?), 1-butyl-3-methylimidazolium tetrafluoroborate ([C4mim]+[BF₄]?), 1-hexyl-3-methylimidazolium tetrafluoroborate ([C₆mim]⁺[BF₄]^?), 1-octyl-3-methylimidazolium tetrafluoroborate ([C₈mim]⁺[BF₄]^?), [C₂mim]⁺[BF₄]^?–DBT, [C₄mim]⁺[BF₄]^?–DBT, [C₆mim]⁺[BF₄]^?–DBT and [C₈mim]⁺[BF₄]^?–DBT systems are optimized systematically at the B3LYP/6-31G(d,p) level, and the most stable geometries are obtained by NBO and AIM analyses. The results indicate that DBT and imidazolium rings of ionic liquids are parallel to each other. It is found that the [BF₄]^? anion prefers to be located close to a C1–H9 proton ring in the vicinity of the imidazolium ring and the most stable gas-phase structure of [C _n mim]⁺[BF₄]^? has four hydrogen bonds between [C _n mim]+ and [BF₄]?. There are hydrogen bonding interactions, π–π and C–H–π interactions between [C₈mim]⁺[BF₄]^? and DBT, which is confirmed by NBO and AIM analyses. The calculated interaction energies for the studied ionic liquids can be used to interpret a better extracting ability of [C₈mim]⁺[BF₄]^? to remove DBT, due to stronger interactions between [C₈mim]⁺[BF₄]^? and DBT, in agreement with the experimental results of dibenzothiophene extraction by [C _n mim]⁺[BF₄]^?.     

Theoretical study on the atmospheric reaction of CH3O2 with OH

A quantum chemical investigation on the reaction mechanism of CH₃O₂ with OH has been performed. Based on B3LYP and QCISD(T) calculations, seven possible singlet pathways and seven possible triplet pathways have been found. On the singlet potential energy surface (PES), the most favorable channel starts with a barrierless addition of O atom to CH₃O₂ leading to CH₃OOOH and then the O? O bond dissociates to give out CH₃O + HO₂. On the triplet PES, the calculations indicate that the dominant products should be ³CH₂O₂ + H₂O with an energy barrier of 29.95 kJ/mol. The results obtained in this work enrich the theoretical information of the title reaction and provide guidance for analogous atmospheric chemistry reactions. © 2015 Wiley Periodicals, Inc.     

Dependence of the rate constants on the treatment of internal rotation modes: the reaction OH + CH3SH --> CH3S + H2O as an example

The title reaction has been used as an example to test the importance of using a hindered rotor treatment instead of a harmonic oscillator model for calculating vibrational partition functions corresponding to low-frequency internal rotation modes. First, a normal-mode analysis according to the Ayala and Schlegel's algorithm has been used to identify the internal rotation modes of methanethiol and the transition state structure. Then, after calculation of the energy barrier for each internal rotation, the corresponding hindered rotor partition functions have been calculated following the CW scheme of Chuang and Truhlar. The results show that the anharmonic treatment produces a rather modest improvement of the rate constants at room temperature or below.     

CH3SH与H2O2气相反应机理的理论研究

采用密度泛函理论的B3LYP方法, 在6-311＋G(d,p)基组水平上研究了CH₃SH与H₂O₂的微观反应机理, 全参数优化了反应势能面上各驻点的几何构型, 振动分析和内禀反应坐标(IRC)分析结果证实了中间体和过渡态的真实性, 计算所得的键鞍点电荷密度的变化情况也确认了反应过程. 结果表明, 反应共分三大步进行, 包含两条反应通道, 第二步由IM1到CH₃SO₂H的反应为决速步骤, 其中的第一条通道是主要反应通道, 相应活化能为157.3和109.7 kJ/mol.     

Formation pathways of CH3SOH from CH3S(OH)CH3 in the presence of O2: a theoretical study

Methane sulfenic acid (CH₃SOH, MSEA) has been suggested in the literature as a possible stable product within the addition channel of the OH-initiated oxidation of dimethyl sulfide. In particular, it has been proposed as one of the thermodynamically feasible products of the reaction of CH₃S(OH)CH₃ adduct with O₂. However, MSEA has never been experimentally observed and a detailed theoretical analysis of all the reaction pathways leading to MSEA formation has never been reported. In this study, the first density functional and ab initio electronic structure calculations are carried out to characterize those reaction channels yielding MSEA. The adduct formed by the reaction of DMS-OH with O₂ (CH₃S(O₂)(OH)CH₃) has been taken as the starting point. On the other hand, a new reaction pathway, which competes with the MSEA formation yielding DMSO instead, is also presented. The kinetic relevance of those different reaction pathways is discussed to assert their contribution to the experimental measurements of the end-products of DMS-OH-initiated oxidation.     

Cooperative atomic migrations in the associates of formic acid molecule with H2O...X systems (X=CH3OH,NH2OH,H2O2, HOF,and H2O)

The pathways and activation barriers of cooperative biproton migrations in the associates of the formic acid molecule with H₂O and X molecules (X=CH₃OH, NH₂OH, H₂O₂, FOH, and H₂O) are calculated by an ab initio method (3-21G and 6-31G^** basis sets). A cooperative triproton transfer occurs in the system with X=H₂O. The activation barriers of this transfer calculated in the 3-21G and 6-31G^** basis sets are 6.94 and 27.29 (through the structure of C₂ symmetry) or 7.99 and 26.08 kcal/mole (through the structure of C_s symmetry), respectively. In the systems with X=H₃COH, HOOH, and FOH, the biproton transfer is accompanied by synchronous shifts of two hydroxyl groups and overcomes high activation barriers (>40 kcal/mole), which is accounted for by poor stereochemical similarity for the low-barrier cooperative processes in the given molecular associates. Scientific Research Institute of Physical and Organic Chemistry, Rostov State University. Translated fromZhurnal Strukturnoi Khimii, Vol. 37, No. 5, pp. 845–858, September–October, 1996. Translated by I. Izvekova     

DFT,AIM, and NBO analyses of 1-methyl-2-thioxoimidazolidin-4-one tautomers and their complexes with iodine

Thioimidazoline derivatives can be used to treat hyperthyroidism due to their ability to make complexes with iodine. In this research designed to find new structures with the same ability, 1-methyl-2-thioxoimidazolidin-4-one (MTIO) and the structures of MTIO tautomers (5 tautomers), their isomers (total 9 isomers) and their complexes with iodine are optimized using the B3LYP method with two different basis sets to obtain their molecular parameters, relative energies, and vibrational frequencies. The relative energies show that in all tautomers and complexes, ketone and thione forms are more stable than enol and thienol forms, and also Z isomers are more stable than E isomers. Moreover, the NBO calculation is carried out for tautomers and complexes to obtain atomic charges and acceptor-donor interactions. These results confirm the ability of MTIO tautomers to form complexes and show that the planar complexes have more effective interaction than the perpendicular complexes. The essence and important complexation properties are also calculated and confirmed using the AIM analysis.     

Kinetics and mechanism for the reactions of H atoms with CH3SH and C2H5SH

A kinetic study of the reactions of H atoms with CH₃SH and C₂H₅SH has been carried out at 298 K by the discharge flow technique with EPR and mass spectrometric analysis of the species. The pressure was 1 torr. It was found: k₁ = (2.20 ± 0.20) × 10^?12 for the reaction H + CH₃SH (1) and k₂ = (2.40 ± 0.16) × 10^?12 for the reaction H + C₂H₅SH (2). Units are cm³ molecule^?1 s^?1. A mass spectrometric analysis of the reaction products and a computer simulation of the reacting systems have shown that reaction (1) proceeds through two mechanisms leading to the formation of CH₃S + H₂ (1a) and CH₃ + H₂S (1b).     

Products of the gas-phase reactions of OH radicals with (C2H5O)2P(S)CH3 and (C2H5O)3PS

Products of the gas-phase reactions of OH radicals with O,O-diethyl methylphosphonothioate [(C2H5O)2P(S)CH3, DEMPT] and O,O,O-triethyl phosphorothioate [(C2H5O)3PS, TEPT] have been investigated at room temperature and atmospheric pressure of air using in situ atmospheric pressure ionization mass spectrometry (API-MS) and, for the TEPT reaction, gas chromatography and in situ Fourier transform infrared (FT-IR) spectroscopy. Combined with products quantified previously by gas chromatography, the products observed were: from the DEMPT reaction, (C2H5O)2P(O)CH3 (21+/-4% yield) and C2H5OP(S)(CH3)OH or C2H5OP(O)(CH3)SH (presumed to be C2H5OP(O)(CH3)SH by analogy with the TEPT reaction); and from the TEPT reaction, (C2H5O)3PO (54-62% yield), SO2 (67+/-10% yield), CH3CHO (22-40% yield) and, tentatively, (C2H5O)2P(O)SH. The FT-IR analyses showed that the formation yields of HCHO, CO, CO2, peroxyacetyl nitrate [CH3C(O)OONO2], organic nitrates, and acetates from the TEPT reaction were <5%, 3+/-1%, <7%, <2%, 5+/-3%, and 3+/-2%, respectively. Possible reaction mechanisms are discussed.